MGE detailed information
MGE type: Conjugative plasmid MGE length: 48390 bp
Accession: NZ_CP027222 Location: 1..48390 Organism: Escherichia coli strain 2015C-3101 Replicon: plasmid unnamed1
Accession: NZ_CP027222 Location: 1..48390 Organism: Escherichia coli strain 2015C-3101 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H98_RS29710 () | 344..2011 | - | 1668 | Protein_1 | conjugal transfer protein TraG | - |
| C6H98_RS28265 () | 2064..3278 | + | 1215 | Protein_2 | IS3 family transposase IS1203 | Transposase |
| C6H98_RS28270 () | 3320..4484 | - | 1165 | Protein_3 | conjugal transfer mating pair stabilization protein TraG | - |
| C6H98_RS28275 () | 4481..5175 | - | 695 | Protein_4 | conjugal transfer protein TraH | - |
| C6H98_RS28285 () | 5171..5761 | - | 591 | WP_000002783.1 | conjugal transfer protein TraP | - |
| C6H98_RS28290 () | 5751..7178 | - | 1428 | WP_000146670.1 | conjugal transfer protein TraB | - |
| C6H98_RS28295 () | 7178..7882 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| C6H98_RS28300 () | 7893..8459 | - | 567 | WP_000399789.1 | type IV conjugative transfer system protein TraE | - |
| C6H98_RS28305 () | 8481..8792 | - | 312 | WP_000012104.1 | type IV conjugative transfer system protein TraL | - |
| C6H98_RS28310 () | 8807..9166 | - | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| C6H98_RS28315 () | 9199..9594 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| C6H98_RS28320 () | 9693..10382 | - | 690 | WP_000283394.1 | conjugal transfer transcriptional regulator TraJ | - |
| C6H98_RS28325 () | 10569..10952 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| C6H98_RS28330 () | 11366..11875 | + | 510 | Protein_14 | transglycosylase SLT domain-containing protein | - |
| C6H98_RS28335 () | 12172..12993 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| C6H98_RS28340 () | 13113..13401 | - | 289 | Protein_16 | hypothetical protein | - |
| C6H98_RS29715 () | 13745..13969 | + | 225 | WP_001427866.1 | hypothetical protein | - |
| C6H98_RS28360 () | 14323..14481 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 14525..14749 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 14525..14749 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 14525..14749 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 14525..14749 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| C6H98_RS29450 () | 14561..14749 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| C6H98_RS28365 () | 14761..15480 | - | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| C6H98_RS28370 () | 15477..15911 | - | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| C6H98_RS28375 () | 15966..17924 | - | 1959 | WP_001145472.1 | ParB/RepB/Spo0J family partition protein | - |
| C6H98_RS28380 () | 17983..18216 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| C6H98_RS28385 () | 18272..18799 | - | 528 | WP_000290792.1 | single-stranded DNA-binding protein | - |
| C6H98_RS28400 () | 19144..19368 | + | 225 | WP_001427866.1 | hypothetical protein | - |
| C6H98_RS28415 () | 19672..20234 | - | 563 | Protein_26 | class I SAM-dependent methyltransferase | - |
| C6H98_RS28420 () | 20279..21639 | - | 1361 | Protein_27 | DUF3560 domain-containing protein | - |
| C6H98_RS28425 () | 21691..21921 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| C6H98_RS28435 () | 22960..23151 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| C6H98_RS28440 () | 23148..23569 | - | 422 | Protein_30 | DUF1380 family protein | - |
| C6H98_RS28445 () | 23616..23918 | - | 303 | WP_072106536.1 | antirestriction protein | - |
| C6H98_RS28455 () | 24387..25574 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| C6H98_RS28460 () | 25574..25939 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| C6H98_RS28465 () | 26030..26526 | + | 497 | Protein_34 | IS3 family transposase IS629 | Transposase |
| C6H98_RS28475 () | 27049..27563 | + | 515 | Protein_35 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C6H98_RS28480 () | 27565..30561 | + | 2997 | WP_000217744.1 | Hemolysin, chromosomal | VF |
| C6H98_RS28485 () | 30611..32731 | + | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C6H98_RS28490 () | 32735..34175 | + | 1441 | Protein_38 | Hemolysin secretion protein D, chromosomal | VF |
| C6H98_RS28495 () | 34302..34955 | - | 654 | Protein_39 | IS3 family transposase ISEc48 | Transposase |
| C6H98_RS28500 () | 34994..36532 | - | 1539 | WP_000998093.1 | IS66 family transposase ISEc8 | Transposase |
| C6H98_RS28505 () | 36582..36930 | - | 349 | Protein_41 | IS66 family transposase ISEc8 | Transposase |
| C6H98_RS28510 () | 36927..37316 | - | 390 | WP_001282151.1 | IS66 family transposase ISEc8 | Transposase |
| C6H98_RS28515 () | 37457..38017 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| C6H98_RS28520 () | 38120..38980 | - | 861 | WP_000704529.1 | putative protein YcjY | VF |
| C6H98_RS28525 () | 39039..39785 | - | 747 | WP_000205714.1 | conjugal transfer pilus acetylase TraX | - |
| C6H98_RS28530 () | 39805..45074 | - | 5270 | Protein_46 | Multifunctional conjugation protein TraI | Relaxase |
| C6H98_RS28535 () | 45074..47228 | - | 2155 | Protein_47 | type IV conjugative transfer system coupling protein TraD | - |
| C6H98_RS28540 () | 47481..48212 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|