MGE detailed information
MGE type: Prophage MGE length: 89837 bp
Accession: NZ_CP027221 Location: 2301028..2390864 Organism: Escherichia coli strain 2015C-3101 Replicon: chromosome
Accession: NZ_CP027221 Location: 2301028..2390864 Organism: Escherichia coli strain 2015C-3101 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H98_RS29765 () | 2297017..2297064 | + | 48 | WP_211180494.1 | protein YnaN | - |
| C6H98_RS12145 () | 2297078..2298061 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| C6H98_RS12155 () | 2298539..2299912 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| C6H98_RS12160 () | 2300041..2300976 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| C6H98_RS12165 () | 2301028..2302263 | - | 1236 | WP_000040839.1 | Putative defective protein IntQ ; Integrase | Integrase |
| C6H98_RS12170 () | 2302265..2302480 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| C6H98_RS12175 () | 2302580..2302768 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 2302584..2302762 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2302584..2302762 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2302584..2302762 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2302584..2302762 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| C6H98_RS12180 () | 2302806..2302955 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| C6H98_RS12185 () | 2303011..2303820 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| C6H98_RS12190 () | 2303813..2306413 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| C6H98_RS12195 () | 2306515..2306790 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| C6H98_RS12200 () | 2306865..2307035 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| C6H98_RS12205 () | 2307035..2307256 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| C6H98_RS12215 () | 2307698..2308186 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| C6H98_RS12220 () | 2308183..2308338 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| C6H98_RS12225 () | 2308349..2308528 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| C6H98_RS12235 () | 2308771..2309190 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| C6H98_RS12240 () | 2309270..2309524 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| C6H98_RS12245 () | 2309521..2309943 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| C6H98_RS12250 () | 2310021..2310809 | + | 789 | WP_001304174.1 | hypothetical protein | - |
| C6H98_RS12255 () | 2310816..2311562 | + | 747 | WP_000788980.1 | ATP-binding protein | - |
| C6H98_RS12260 () | 2311585..2312346 | + | 762 | WP_000450712.1 | DUF1627 domain-containing protein | - |
| C6H98_RS12265 () | 2312362..2312784 | + | 423 | WP_001141110.1 | DUF977 family protein | - |
| C6H98_RS12270 () | 2312890..2313102 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| C6H98_RS12275 () | 2313135..2313352 | + | 218 | Protein_2213 | DUF4014 family protein | - |
| C6H98_RS12280 () | 2313354..2313617 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| C6H98_RS12285 () | 2313628..2313789 | + | 162 | WP_000208018.1 | hypothetical protein | - |
| C6H98_RS12290 () | 2313868..2314113 | + | 246 | WP_000365100.1 | hypothetical protein | - |
| C6H98_RS12295 () | 2314545..2315696 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| C6H98_RS12300 () | 2315664..2316653 | - | 990 | WP_047086260.1 | hypothetical protein | - |
| C6H98_RS12305 () | 2316653..2318044 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| C6H98_RS12310 () | 2318544..2319143 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| C6H98_RS12315 () | 2319143..2319433 | + | 291 | WP_000247761.1 | DUF1364 domain-containing protein | - |
| C6H98_RS12320 () | 2319430..2319984 | + | 555 | WP_000640158.1 | DUF1133 family protein | - |
| C6H98_RS12335 () | 2320546..2320977 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| C6H98_RS12340 () | 2320974..2321229 | + | 256 | Protein_2224 | DUF3927 family protein | - |
| C6H98_RS12345 () | 2321548..2323401 | + | 1854 | WP_000143077.1 | SASA family carbohydrate esterase | - |
| C6H98_RS12350 () | 2323551..2323766 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| C6H98_RS12355 () | 2323771..2324115 | + | 345 | WP_000731221.1 | YdfR family protein | - |
| C6H98_RS12360 () | 2324166..2324699 | + | 534 | WP_000992086.1 | lysozyme | - |
| C6H98_RS12365 () | 2324973..2325512 | + | 540 | WP_001344811.1 | phage antirepressor KilAC domain-containing protein | - |
| C6H98_RS12375 () | 2326805..2326981 | + | 177 | WP_000285960.1 | phage antirepressor KilAC domain-containing protein | - |
| C6H98_RS29245 () | 2327076..2327207 | + | 132 | WP_001280923.1 | hypothetical protein | - |
| C6H98_RS29255 () | 2327430..2327615 | + | 186 | WP_012817877.1 | Rz1 family lipoprotein | - |
| C6H98_RS12395 () | 2328016..2328342 | + | 327 | WP_000828070.1 | TonB family protein | - |
| C6H98_RS12400 () | 2328474..2328674 | - | 201 | WP_000095744.1 | YlcI/YnfO family protein | - |
| C6H98_RS12405 () | 2328716..2329081 | + | 366 | WP_000829192.1 | HNH endonuclease | - |
| C6H98_RS12415 () | 2329371..2329934 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| C6H98_RS12420 () | 2329931..2331592 | + | 1662 | WP_001411753.1 | terminase large subunit | - |
| C6H98_RS12425 () | 2331656..2333593 | + | 1938 | WP_000173011.1 | phage major capsid protein | - |
| C6H98_RS12430 () | 2333638..2333859 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| C6H98_RS12435 () | 2333805..2336227 | + | 2423 | Protein_2241 | phage portal protein | - |
| C6H98_RS12440 () | 2336224..2336550 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| C6H98_RS12445 () | 2336560..2336910 | + | 351 | WP_001007911.1 | phage head closure protein | - |
| C6H98_RS12450 () | 2336907..2337353 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| C6H98_RS12455 () | 2337350..2337694 | + | 345 | WP_000133393.1 | DUF3168 domain-containing protein | - |
| C6H98_RS12460 () | 2337763..2338479 | + | 717 | WP_001275467.1 | immunoglobulin domain-containing protein | - |
| C6H98_RS12465 () | 2338485..2338859 | + | 375 | WP_001030041.1 | phage tail assembly chaperone | - |
| C6H98_RS12470 () | 2338955..2339164 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C6H98_RS12475 () | 2339216..2341087 | + | 1872 | Protein_2249 | tape measure protein | - |
| C6H98_RS12480 () | 2341273..2342460 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| C6H98_RS12485 () | 2342460..2342825 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| C6H98_RS12490 () | 2342910..2344286 | + | 1377 | Protein_2252 | phage tail tape measure protein | - |
| C6H98_RS12495 () | 2344279..2344620 | + | 342 | WP_000807940.1 | phage tail protein | - |
| C6H98_RS12500 () | 2344620..2345318 | + | 699 | WP_001369426.1 | phage minor tail protein L | - |
| C6H98_RS12505 () | 2345324..2346067 | + | 744 | WP_001369422.1 | C40 family peptidase | - |
| C6H98_RS12510 () | 2346013..2346645 | + | 633 | WP_096860308.1 | tail assembly protein | - |
| C6H98_RS12515 () | 2346988..2350461 | + | 3474 | WP_000514717.1 | host specificity protein J | - |
| C6H98_RS12520 () | 2350529..2351128 | + | 600 | WP_001228290.1 | Outer membrane protein X | VF |
| C6H98_RS12525 () | 2351280..2352584 | + | 1305 | WP_000216548.1 | ISNCY family transposase KIS | Transposase |
| C6H98_RS12530 () | 2352586..2352855 | + | 270 | WP_001023476.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6H98_RS12535 () | 2352968..2353368 | + | 401 | Protein_2261 | DUF1076 domain-containing protein | - |
| C6H98_RS12540 () | 2353348..2353947 | - | 600 | Protein_2262 | hypothetical protein ; Integrase | Integrase |
| C6H98_RS12545 () | 2353970..2354092 | + | 123 | WP_106409364.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6H98_RS12550 () | 2354199..2355110 | + | 912 | WP_000950979.1 | Protein kinase OspG | VF |
| C6H98_RS12555 () | 2355176..2355615 | + | 440 | Protein_2265 | Effector protein NleF | VF |
| C6H98_RS12570 () | 2356923..2357410 | - | 488 | Protein_2267 | IS256 family transposase ISEic2 | Transposase |
| C6H98_RS12575 () | 2357897..2358175 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| C6H98_RS12580 () | 2358603..2358749 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| C6H98_RS12585 () | 2358886..2359533 | - | 648 | WP_001303944.1 | hypothetical protein | VF |
| C6H98_RS12590 () | 2359717..2360307 | + | 591 | WP_001144879.1 | hypothetical protein | VF |
| C6H98_RS12595 () | 2360526..2361582 | - | 1057 | Protein_2272 | IS630 family transposase | - |
| C6H98_RS29560 () | 2361814..2362464 | + | 651 | WP_001345079.1 | hypothetical protein | VF |
| C6H98_RS12605 () | 2362635..2362870 | + | 236 | Protein_2274 | IS3 family transposase | - |
| C6H98_RS12610 () | 2362813..2363166 | - | 354 | WP_001261191.1 | recombinase family protein | - |
| C6H98_RS12615 () | 2363257..2363976 | + | 720 | WP_000171274.1 | TonB system transport protein TonB | - |
| C6H98_RS12620 () | 2364016..2364414 | - | 399 | WP_000108160.1 | acyl-CoA thioester hydrolase YciA | - |
| C6H98_RS12625 () | 2364519..2365058 | - | 540 | WP_000808667.1 | septation protein A | - |
| C6H98_RS12630 () | 2365088..2365831 | - | 744 | WP_000028540.1 | envelope biogenesis factor ElyC | - |
| C6H98_RS12635 () | 2365859..2365948 | - | 90 | Protein_2280 | YkgJ family cysteine cluster protein | - |
| C6H98_RS12640 () | 2366188..2366826 | + | 639 | WP_000737224.1 | outer membrane protein OmpW | - |
| C6H98_RS12645 () | 2366872..2368002 | - | 1131 | WP_000113674.1 | hypothetical protein ; Integrase | Integrase |
| C6H98_RS12650 () | 2367980..2368228 | - | 249 | WP_000113189.1 | excisionase | - |
| C6H98_RS12655 () | 2368293..2370764 | - | 2472 | WP_000048484.1 | exonuclease | - |
| C6H98_RS12660 () | 2370860..2371048 | - | 189 | WP_000199480.1 | DUF1482 family protein | - |
| C6H98_RS12665 () | 2371045..2371233 | - | 189 | WP_000449172.1 | cell division inhibitor | - |
| C6H98_RS12675 () | 2371794..2372027 | + | 234 | WP_000920491.1 | hypothetical protein | - |
| C6H98_RS12680 () | 2372005..2372412 | - | 408 | WP_000394552.1 | hypothetical protein | - |
| C6H98_RS12685 () | 2372435..2372653 | - | 219 | WP_001171894.1 | hypothetical protein | - |
| C6H98_RS12690 () | 2372726..2373025 | - | 300 | WP_001240336.1 | hypothetical protein | - |
| C6H98_RS12695 () | 2373290..2373697 | - | 408 | WP_000787428.1 | helix-turn-helix domain-containing protein | - |
| C6H98_RS12700 () | 2373774..2374000 | + | 227 | Protein_2292 | transcriptional regulator | - |
| C6H98_RS12705 () | 2373984..2374535 | + | 552 | WP_000705622.1 | hypothetical protein | - |
| C6H98_RS29265 () | 2374507..2375547 | + | 1041 | WP_000020556.1 | DNA-binding protein | - |
| C6H98_RS12710 () | 2375459..2376001 | + | 543 | WP_157825328.1 | replication protein | - |
| C6H98_RS12715 () | 2376035..2376769 | + | 735 | WP_000450683.1 | DUF1627 domain-containing protein | - |
| C6H98_RS29270 () | 2376766..2376930 | + | 165 | WP_001505071.1 | hypothetical protein | - |
| C6H98_RS12725 () | 2377629..2378387 | + | 759 | WP_001449026.1 | hypothetical protein | VF |
| C6H98_RS12735 () | 2378723..2378878 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C6H98_RS12740 () | 2379099..2379356 | + | 258 | WP_001217394.1 | hypothetical protein | - |
| C6H98_RS12745 () | 2379426..2379704 | + | 279 | WP_032178572.1 | hypothetical protein | - |
| C6H98_RS12750 () | 2379706..2380761 | + | 1056 | WP_001265289.1 | DUF968 domain-containing protein | - |
| C6H98_RS12755 () | 2380762..2381127 | + | 366 | WP_000140002.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6H98_RS12760 () | 2381124..2381813 | + | 690 | WP_001059384.1 | antiterminator | - |
| C6H98_RS12780 () | 2382431..2382859 | + | 429 | Protein_2305 | tellurite resistance TerB family protein | - |
| C6H98_RS12785 () | 2382856..2383111 | + | 256 | Protein_2306 | DUF3927 family protein | - |
| C6H98_RS12795 () | 2383338..2385098 | + | 1761 | Protein_2307 | DUF1737 domain-containing protein | - |
| C6H98_RS12800 () | 2385148..2386361 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| C6H98_RS12810 () | 2386451..2386720 | + | 270 | WP_001023452.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6H98_RS12815 () | 2386861..2387736 | + | 876 | WP_000491542.1 | hypothetical protein | VF |
| C6H98_RS29275 () | 2387961..2388611 | - | 651 | WP_001121225.1 | hypothetical protein | VF |
| C6H98_RS12830 () | 2388615..2388881 | - | 267 | Protein_2312 | hypothetical protein | - |
| C6H98_RS29565 () | 2388939..2389088 | - | 150 | WP_001345374.1 | hypothetical protein | - |
| C6H98_RS12835 () | 2389207..2389449 | - | 243 | WP_012817881.1 | DinI-like family protein | - |
| C6H98_RS12840 () | 2389581..2390864 | + | 1284 | Protein_2315 | MHS family MFS transporter YdfJ | - |
| C6H98_RS12845 () | 2390953..2392413 | + | 1461 | WP_000527750.1 | mannitol dehydrogenase family protein | - |
| C6H98_RS12850 () | 2392449..2392652 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C6H98_RS12855 () | 2392830..2393516 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C6H98_RS12860 () | 2393605..2394351 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|