MGE detailed information
MGE type: Prophage MGE length: 64327 bp
Accession: NZ_CP027221 Location: 1986196..2050522 Organism: Escherichia coli strain 2015C-3101 Replicon: chromosome
Accession: NZ_CP027221 Location: 1986196..2050522 Organism: Escherichia coli strain 2015C-3101 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H98_RS10350 () | 1983669..1984742 | - | 1074 | WP_000810250.1 | acyltransferase family protein | - |
| C6H98_RS10355 () | 1985004..1986203 | + | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| C6H98_RS10360 () | 1986196..1986897 | + | 702 | WP_001033694.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| C6H98_RS10365 () | 1986897..1988141 | + | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| C6H98_RS10370 () | 1988170..1989081 | + | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| C6H98_RS10375 () | 1989097..1989918 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| C6H98_RS10380 () | 1990057..1990845 | - | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| C6H98_RS10385 () | 1990842..1991303 | - | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| C6H98_RS10390 () | 1991361..1992407 | - | 1047 | WP_000759338.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| C6H98_RS10395 () | 1992404..1993198 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| C6H98_RS10400 () | 1993365..1994483 | - | 1119 | WP_000074981.1 | hypothetical protein ; Integrase | Integrase |
| C6H98_RS10405 () | 1994452..1994721 | - | 270 | WP_000003742.1 | excisionase | - |
| C6H98_RS10410 () | 1994783..1997248 | - | 2466 | WP_000048442.1 | exonuclease | - |
| C6H98_RS10415 () | 1997341..1997532 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C6H98_RS10420 () | 1997529..1997717 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C6H98_RS10430 () | 1998201..1998419 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| C6H98_RS10435 () | 1998460..1998849 | - | 390 | WP_001447517.1 | hypothetical protein | - |
| C6H98_RS10445 () | 1999145..1999423 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6H98_RS10450 () | 1999425..1999616 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C6H98_RS10455 () | 1999637..2000008 | - | 372 | WP_001169687.1 | hypothetical protein | - |
| C6H98_RS10460 () | 2000106..2000408 | + | 303 | WP_001444689.1 | transcriptional regulator | - |
| C6H98_RS10465 () | 2000405..2000830 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C6H98_RS10470 () | 2000853..2001815 | + | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| C6H98_RS10475 () | 2001856..2002278 | + | 423 | WP_001151120.1 | DUF977 family protein | - |
| C6H98_RS10480 () | 2002275..2002529 | + | 255 | WP_000004322.1 | hypothetical protein | - |
| C6H98_RS10485 () | 2002522..2002833 | + | 312 | WP_001002672.1 | hypothetical protein | - |
| C6H98_RS10490 () | 2003139..2003717 | + | 579 | WP_001204666.1 | sce7726 family protein | - |
| C6H98_RS10495 () | 2003677..2004774 | - | 1098 | WP_000156210.1 | beta family protein | - |
| C6H98_RS10505 () | 2006660..2006800 | + | 141 | WP_072058819.1 | type I toxin-antitoxin system Hok family toxin | - |
| C6H98_RS10515 () | 2006968..2007240 | + | 273 | WP_012817871.1 | hypothetical protein | - |
| C6H98_RS10520 () | 2007242..2008297 | + | 1056 | WP_001369253.1 | DUF968 domain-containing protein | - |
| C6H98_RS10525 () | 2008298..2008663 | + | 366 | WP_000140024.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6H98_RS10530 () | 2008672..2009202 | + | 531 | WP_000640048.1 | DUF1133 family protein | - |
| C6H98_RS29185 () | 2009444..2009641 | + | 198 | WP_000917750.1 | hypothetical protein | - |
| C6H98_RS10540 () | 2009792..2010850 | + | 1059 | WP_000935544.1 | site-specific DNA-methyltransferase | - |
| C6H98_RS10560 () | 2011647..2013497 | + | 1851 | WP_000874287.1 | DUF1737 domain-containing protein | - |
| C6H98_RS10570 () | 2013936..2014151 | + | 216 | WP_024164617.1 | class II holin family protein | - |
| C6H98_RS10575 () | 2014156..2014500 | + | 345 | WP_000731236.1 | YdfR family protein | - |
| C6H98_RS10580 () | 2014551..2015084 | + | 534 | WP_000992167.1 | lysozyme | - |
| C6H98_RS10585 () | 2015355..2015924 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C6H98_RS29190 () | 2015924..2016070 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C6H98_RS29200 () | 2016298..2016483 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C6H98_RS10595 () | 2016908..2017135 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| C6H98_RS10600 () | 2017177..2017542 | + | 366 | WP_000279788.1 | HNH endonuclease | - |
| C6H98_RS10610 () | 2017833..2018396 | + | 564 | WP_000958415.1 | terminase small subunit | - |
| C6H98_RS10615 () | 2018393..2020054 | + | 1662 | WP_001369319.1 | terminase large subunit | - |
| C6H98_RS10620 () | 2020118..2022055 | + | 1938 | WP_000172984.1 | phage major capsid protein | - |
| C6H98_RS10625 () | 2022100..2022321 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| C6H98_RS10630 () | 2022267..2025013 | + | 2747 | Protein_1905 | phage portal protein | - |
| C6H98_RS10635 () | 2025010..2025336 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| C6H98_RS10640 () | 2025346..2025696 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| C6H98_RS10645 () | 2025693..2026139 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| C6H98_RS10650 () | 2026136..2026480 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C6H98_RS10655 () | 2026547..2027263 | + | 717 | WP_001275472.1 | tail protein | - |
| C6H98_RS10660 () | 2027269..2027643 | + | 375 | WP_001030042.1 | phage tail assembly chaperone | - |
| C6H98_RS10665 () | 2027739..2027948 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C6H98_RS10670 () | 2028000..2031242 | + | 3243 | WP_000212932.1 | phage tail tape measure protein | - |
| C6H98_RS10675 () | 2031235..2031576 | + | 342 | WP_000807928.1 | phage tail protein | - |
| C6H98_RS10680 () | 2031576..2032274 | + | 699 | WP_001447444.1 | phage minor tail protein L | - |
| C6H98_RS10685 () | 2032291..2032611 | - | 321 | WP_001302649.1 | Arc family DNA-binding protein | - |
| C6H98_RS10690 () | 2032719..2032892 | + | 174 | WP_001154345.1 | Arc family DNA-binding protein | - |
| C6H98_RS10695 () | 2032963..2033885 | + | 923 | Protein_1918 | phage antirepressor Ant | - |
| C6H98_RS10700 () | 2033940..2034677 | + | 738 | WP_000967279.1 | C40 family peptidase | - |
| C6H98_RS10705 () | 2034623..2035255 | + | 633 | WP_122996286.1 | tail assembly protein | - |
| C6H98_RS10710 () | 2035492..2038971 | + | 3480 | WP_000514853.1 | host specificity protein J | - |
| C6H98_RS10715 () | 2039038..2039637 | + | 600 | WP_001230459.1 | Outer membrane protein X | VF |
| C6H98_RS10720 () | 2039702..2041024 | + | 1323 | WP_000268887.1 | ISNCY family transposase KIS | Transposase |
| C6H98_RS10725 () | 2041026..2041295 | + | 270 | WP_001023356.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6H98_RS29205 () | 2041297..2041389 | + | 93 | Protein_1925 | tail assembly protein | - |
| C6H98_RS29210 () | 2041402..2041491 | + | 90 | WP_115801847.1 | hypothetical protein | - |
| C6H98_RS10730 () | 2041511..2043859 | + | 2349 | WP_001301673.1 | E3 ubiquitin-protein ligase SopA | VF |
| C6H98_RS10735 () | 2044450..2047850 | + | 3401 | Protein_1928 | hypothetical protein | VF |
| C6H98_RS29535 () | 2048227..2048379 | - | 153 | Protein_1929 | IS256 family transposase ISSoEn2 | Transposase |
| C6H98_RS29540 () | 2048379..2048597 | + | 219 | Protein_1930 | IS256 family transposase ISSoEn2 | Transposase |
| C6H98_RS10745 () | 2048632..2048745 | + | 114 | Protein_1931 | non-LEE encoded effector protein NleB | - |
| C6H98_RS10750 () | 2048825..2049100 | - | 276 | WP_001303921.1 | hypothetical protein | - |
| C6H98_RS10755 () | 2049161..2050522 | - | 1362 | WP_000938117.1 | hypothetical protein | VF |
| C6H98_RS10765 () | 2050886..2051749 | - | 864 | WP_000799400.1 | spermidine/putrescine ABC transporter permease PotB | - |
| C6H98_RS10770 () | 2051733..2052869 | - | 1137 | WP_000531601.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
| C6H98_RS10780 () | 2053119..2054348 | + | 1230 | WP_000359438.1 | peptidase T | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|