MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 26607 bp
Accession: NZ_CP027219 Location: 3220679..3247285 Organism: Escherichia coli strain 2015C-3163 Replicon: chromosome
Accession: NZ_CP027219 Location: 3220679..3247285 Organism: Escherichia coli strain 2015C-3163 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6H73_RS17915 () | 3216479..3216676 | - | 198 | WP_000917737.1 | hypothetical protein | - |
| C6H73_RS17920 () | 3216963..3217781 | - | 819 | WP_000265267.1 | CPBP family intramembrane metalloprotease | - |
| C6H73_RS17925 () | 3217933..3218304 | - | 372 | WP_000090265.1 | antitermination protein | - |
| C6H73_RS17930 () | 3218294..3218665 | - | 372 | WP_001217436.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6H73_RS17935 () | 3218678..3219727 | - | 1050 | WP_001265133.1 | DUF968 domain-containing protein | - |
| C6H73_RS17940 () | 3219729..3220007 | - | 279 | WP_001341388.1 | hypothetical protein | - |
| C6H73_RS17945 () | 3220175..3220330 | - | 156 | WP_000813263.1 | type I toxin-antitoxin system toxin HokD | - |
| C6H73_RS17955 () | 3220402..3221476 | + | 1075 | Protein_3272 | IS481 family transposase ISKpn28 | Transposase |
| C6H73_RS17960 () | 3222037..3222810 | + | 774 | WP_000160654.1 | alpha/beta hydrolase | - |
| C6H73_RS17965 () | 3223162..3223575 | - | 414 | WP_001151233.1 | DUF977 family protein | - |
| C6H73_RS17970 () | 3223591..3224361 | - | 771 | WP_000450992.1 | DUF1627 domain-containing protein | - |
| C6H73_RS17975 () | 3224443..3225129 | - | 687 | WP_000788749.1 | ATP-binding protein | - |
| C6H73_RS17980 () | 3225136..3226252 | - | 1117 | Protein_3277 | DNA-binding protein | - |
| C6H73_RS17985 () | 3226331..3226786 | + | 456 | WP_000273724.1 | hypothetical protein | - |
| C6H73_RS17990 () | 3226993..3227418 | - | 426 | WP_000693855.1 | Rha family transcriptional regulator | - |
| C6H73_RS17995 () | 3227402..3227674 | - | 273 | WP_000887453.1 | helix-turn-helix domain-containing protein | - |
| C6H73_RS18000 () | 3227783..3228184 | + | 402 | WP_000986592.1 | helix-turn-helix domain-containing protein | - |
| C6H73_RS18005 () | 3228212..3228403 | + | 192 | WP_000536233.1 | hypothetical protein | Antitoxin Detail |
| C6H73_RS18010 () | 3228403..3228690 | + | 288 | WP_001303876.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6H73_RS18015 () | 3228967..3229122 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| C6H73_RS18025 () | 3229264..3229653 | + | 390 | WP_000394513.1 | hypothetical protein | - |
| C6H73_RS18030 () | 3229840..3230025 | - | 186 | WP_001133046.1 | hypothetical protein | - |
| C6H73_RS18050 () | 3231866..3232054 | + | 189 | WP_000413705.1 | cell division inhibition protein DicB | - |
| C6H73_RS18055 () | 3232051..3232242 | + | 192 | WP_001098307.1 | DUF1482 family protein | - |
| C6H73_RS18060 () | 3232336..3233022 | + | 687 | WP_199852804.1 | exonuclease VIII | - |
| C6H73_RS18065 () | 3233026..3234639 | - | 1614 | WP_000080172.1 | IS66 family transposase ISEc43 | Transposase |
| C6H73_RS18070 () | 3234670..3235020 | - | 351 | WP_000624688.1 | IS66 family transposase ISEc47 | Transposase |
| C6H73_RS18075 () | 3235017..3235451 | - | 435 | WP_001309734.1 | IS66 family transposase ISEc43 | Transposase |
| C6H73_RS18080 () | 3235539..3237356 | + | 1818 | Protein_3294 | 3'-5' exoribonuclease | - |
| C6H73_RS18085 () | 3237424..3237666 | + | 243 | WP_000273151.1 | DUF4224 domain-containing protein | - |
| C6H73_RS18090 () | 3237644..3237787 | + | 144 | Protein_3296 | integrase | - |
| C6H73_RS18095 () | 3237852..3239008 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| C6H73_RS18100 () | 3239001..3239930 | + | 930 | WP_106919110.1 | hypothetical protein ; Integrase | Integrase |
| C6H73_RS18105 () | 3240338..3240997 | + | 660 | WP_000375136.1 | FtsH protease modulator YccA | - |
| C6H73_RS18110 () | 3241088..3241417 | + | 330 | WP_000904444.1 | sulfurtransferase TusE | - |
| C6H73_RS18115 () | 3241414..3241692 | - | 279 | WP_000048255.1 | acylphosphatase | - |
| C6H73_RS18120 () | 3241787..3242977 | + | 1191 | WP_000116292.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| C6H73_RS18125 () | 3243035..3243352 | + | 318 | WP_001295356.1 | heat shock protein HspQ | - |
| C6H73_RS18130 () | 3243397..3243810 | - | 414 | WP_000665217.1 | CoA-binding protein | - |
| C6H73_RS18135 () | 3243983..3244645 | + | 663 | WP_000847791.1 | DUF2057 family protein | - |
| C6H73_RS18140 () | 3244741..3245199 | + | 459 | WP_000424181.1 | methylglyoxal synthase | - |
| C6H73_RS18145 () | 3245231..3247285 | - | 2055 | WP_000420533.1 | DNA helicase IV | - |
| C6H73_RS18150 () | 3247408..3247854 | + | 447 | WP_001261231.1 | YccF domain-containing protein | - |
| C6H73_RS18155 () | 3247864..3250026 | + | 2163 | WP_000875044.1 | TIGR01666 family membrane protein | - |
| C6H73_RS18160 () | 3249989..3250618 | - | 630 | WP_000839153.1 | CRP-S regulon transcriptional coactivator Sxy | - |
| C6H73_RS18165 () | 3250837..3251346 | + | 510 | WP_000288710.1 | cell division inhibitor SulA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|