MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 75779 bp
Accession: NZ_CP027200 Location: 1..75779 Organism: Escherichia coli strain WCHEC025943 Replicon: plasmid p2_025943
Accession: NZ_CP027200 Location: 1..75779 Organism: Escherichia coli strain WCHEC025943 Replicon: plasmid p2_025943
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXB56_RS00590 () | 1..978 | + | 978 | WP_072652232.1 | RepB family plasmid replication initiator protein | - |
| CXB56_RS00595 () | 1263..1994 | - | 732 | WP_072652233.1 | tyrosine-type recombinase/integrase | - |
| CXB56_RS00600 () | 2224..2928 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CXB56_RS00610 () | 3402..4415 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| CXB56_RS00615 () | 4707..5261 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| CXB56_RS00620 () | 5358..5810 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| CXB56_RS00625 () | 5943..6416 | + | 474 | WP_001749985.1 | Dihydrofolate reductase type 1 | ARG |
| CXB56_RS00630 () | 6597..7442 | + | 846 | WP_001749984.1 | Streptomycin 3''-adenylyltransferase | ARG |
| CXB56_RS00635 () | 7559..7906 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| CXB56_RS00640 () | 7900..8739 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| CXB56_RS00645 () | 9144..10685 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| CXB56_RS00650 () | 11012..11197 | + | 186 | WP_046788536.1 | hypothetical protein | - |
| CXB56_RS00655 () | 11278..12033 | - | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| CXB56_RS00660 () | 12203..13063 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| CXB56_RS00665 () | 13246..13605 | - | 360 | Protein_14 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CXB56_RS00670 () | 13659..14363 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CXB56_RS00675 () | 14596..15456 | + | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| CXB56_RS00680 () | 15469..16011 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| CXB56_RS00685 () | 16493..16684 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| CXB56_RS00690 () | 16708..16935 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| CXB56_RS00695 () | 16986..18122 | + | 1137 | WP_000080861.1 | DUF3883 domain-containing protein | - |
| CXB56_RS00700 () | 18237..19607 | + | 1371 | WP_000971921.1 | IS1182 family transposase ISCfr1 | Transposase |
| CXB56_RS00705 () | 20428..21288 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| CXB56_RS00715 () | 21519..22355 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| CXB56_RS00720 () | 22355..23158 | - | 804 | WP_001082320.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| CXB56_RS00725 () | 23219..24034 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| CXB56_RS00735 () | 24364..24540 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| CXB56_RS00740 () | 24722..25726 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| CXB56_RS00745 () | 25805..28771 | - | 2967 | WP_072652147.1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| CXB56_RS00750 () | 28774..29088 | - | 315 | Protein_29 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| CXB56_RS00760 () | 29142..29846 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CXB56_RS00765 () | 29916..30389 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| CXB56_RS00770 () | 30545..31558 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| CXB56_RS27160 () | 31761..32111 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| CXB56_RS00780 () | 32287..32847 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| CXB56_RS27510 () | 32851..33222 | + | 372 | Protein_35 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CXB56_RS27515 () | 33202..33447 | + | 246 | WP_041937891.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CXB56_RS00790 () | 33479..34129 | - | 651 | WP_038989485.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CXB56_RS00795 () | 34235..35434 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| CXB56_RS00800 () | 35466..36350 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| CXB56_RS00805 () | 36488..36895 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| CXB56_RS00810 () | 36884..38635 | + | 1752 | Protein_41 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CXB56_RS00815 () | 38850..40622 | - | 1773 | WP_001262767.1 | DUF262 domain-containing protein | - |
| CXB56_RS00825 () | 40907..41308 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| CXB56_RS27170 () | 41241..41498 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| CXB56_RS00830 () | 41591..42244 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| CXB56_RS00840 () | 43183..44040 | - | 858 | WP_072652179.1 | incFII family plasmid replication initiator RepA | - |
| CXB56_RS00845 () | 44033..44107 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CXB56_RS00855 () | 44344..44598 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| CXB56_RS00860 () | 44838..45428 | - | 591 | WP_063101963.1 | DUF2726 domain-containing protein | - |
| CXB56_RS00865 () | 45467..45675 | - | 209 | Protein_50 | hemolysin expression modulator Hha | - |
| CXB56_RS00870 () | 45721..46182 | - | 462 | WP_072652178.1 | thermonuclease family protein | - |
| CXB56_RS00875 () | 46424..46636 | - | 213 | WP_072652177.1 | hypothetical protein | - |
| CXB56_RS00880 () | 46767..47327 | - | 561 | WP_000139345.1 | fertility inhibition protein FinO | - |
| CXB56_RS00885 () | 47382..48128 | - | 747 | WP_001825166.1 | conjugal transfer pilus acetylase TraX | - |
| CXB56_RS00890 () | 48148..49572 | - | 1425 | Protein_55 | Multifunctional conjugation protein TraI | Relaxase |
| CXB56_RS00895 () | 49577..49837 | - | 261 | Protein_56 | class I SAM-dependent methyltransferase | - |
| CXB56_RS00900 () | 49885..51246 | - | 1362 | WP_050858699.1 | DUF3560 domain-containing protein | - |
| CXB56_RS00905 () | 51298..51528 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| CXB56_RS00915 () | 52044..52292 | + | 249 | WP_072048988.1 | hypothetical protein | - |
| CXB56_RS00925 () | 52564..52755 | - | 192 | WP_045177269.1 | hypothetical protein | - |
| CXB56_RS00930 () | 52752..53174 | - | 423 | WP_050858697.1 | DUF1380 family protein | - |
| CXB56_RS00935 () | 53221..53523 | - | 303 | WP_077793411.1 | antirestriction protein | - |
| CXB56_RS27520 () | 54059..54829 | - | 771 | WP_175393454.1 | hypothetical protein | - |
| CXB56_RS00950 () | 54874..55308 | - | 435 | WP_000274456.1 | DUF1380 family protein | - |
| CXB56_RS00955 () | 55322..55543 | - | 222 | WP_001104885.1 | hypothetical protein | - |
| CXB56_RS00960 () | 55544..56227 | - | 684 | WP_000086160.1 | DNA methylase | - |
| CXB56_RS00965 () | 56303..56608 | - | 306 | WP_032155763.1 | hypothetical protein | - |
| CXB56_RS00970 () | 56612..57514 | - | 903 | WP_077872020.1 | DUF1281 domain-containing protein | - |
| CXB56_RS00980 () | 57932..58180 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| CXB56_RS00985 () | 58177..58614 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CXB56_RS00990 () | 58614..59885 | + | 1272 | WP_064198699.1 | Y-family DNA polymerase | - |
| CXB56_RS00995 () | 59890..60282 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| CXB56_RS01000 () | 60287..61258 | - | 972 | WP_001103697.1 | hypothetical protein | - |
| CXB56_RS01005 () | 61487..62131 | + | 645 | WP_000633913.1 | AAA family ATPase | - |
| CXB56_RS01010 () | 62125..62400 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| CXB56_RS01015 () | 62592..62898 | - | 307 | Protein_76 | tyrosine-type recombinase/integrase | - |
| CXB56_RS01020 () | 63198..63788 | + | 591 | Protein_77 | colicin-B | - |
| CXB56_RS01025 () | 63804..64490 | - | 687 | Protein_78 | IS1 family transposase IS1S | Transposase |
| CXB56_RS01030 () | 64832..66121 | + | 1290 | WP_000824245.1 | MFS transporter | - |
| CXB56_RS01035 () | 66093..67118 | + | 1026 | WP_000864945.1 | zinc-binding alcohol dehydrogenase family protein | - |
| CXB56_RS01040 () | 67177..67848 | - | 672 | WP_046788564.1 | FadR family transcriptional regulator | - |
| CXB56_RS01045 () | 67943..68481 | - | 539 | Protein_82 | GGDEF domain-containing protein | - |
| CXB56_RS01050 () | 68492..69189 | - | 698 | Protein_83 | IS1 family transposase IS1R | Transposase |
| CXB56_RS01055 () | 69241..69369 | - | 129 | Protein_84 | colicin M immunity protein | - |
| CXB56_RS01060 () | 69541..70350 | - | 810 | WP_000016963.1 | site-specific integrase | - |
| CXB56_RS01065 () | 70351..70656 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CXB56_RS01070 () | 70658..70876 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CXB56_RS01085 () | 71344..72039 | + | 696 | WP_072652234.1 | DNA-binding protein | - |
| CXB56_RS01090 () | 72036..72656 | + | 621 | WP_072652229.1 | hypothetical protein | - |
| CXB56_RS01095 () | 72653..73441 | + | 789 | WP_072652230.1 | DUF2971 domain-containing protein | - |
| CXB56_RS01100 () | 73477..74217 | + | 741 | WP_072652231.1 | abortive infection family protein | - |
| CXB56_RS01105 () | 74376..75005 | - | 630 | Protein_92 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|