MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 95895 bp
Accession: NZ_CP027199 Location: 1..95895 Organism: Escherichia coli strain WCHEC025943 Replicon: plasmid p1_025943
Accession: NZ_CP027199 Location: 1..95895 Organism: Escherichia coli strain WCHEC025943 Replicon: plasmid p1_025943
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXB56_RS00005 () | 1..861 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| CXB56_RS00015 () | 1419..2615 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| CXB56_RS00020 () | 2632..3633 | + | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| CXB56_RS00025 () | 3859..5565 | + | 1707 | WP_063119529.1 | hypothetical protein | - |
| CXB56_RS00030 () | 5626..7215 | + | 1590 | WP_000085137.1 | hypothetical protein | - |
| CXB56_RS00035 () | 7225..8040 | + | 816 | WP_023155381.1 | hypothetical protein | - |
| CXB56_RS00040 () | 8076..8657 | + | 582 | WP_000035301.1 | hypothetical protein | - |
| CXB56_RS00045 () | 8669..9178 | + | 510 | WP_000509939.1 | hypothetical protein | - |
| CXB56_RS00050 () | 9294..9449 | - | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| CXB56_RS00055 () | 9631..9876 | - | 246 | WP_001369095.1 | hypothetical protein | - |
| CXB56_RS00060 () | 9927..10772 | - | 846 | WP_024187338.1 | hypothetical protein | - |
| CXB56_RS00065 () | 10802..11602 | - | 801 | WP_100728220.1 | phage antirepressor KilAC domain-containing protein | - |
| CXB56_RS00070 () | 11767..12810 | - | 1044 | WP_097308143.1 | phage antirepressor KilAC domain-containing protein | - |
| CXB56_RS00075 () | 12807..13028 | - | 222 | WP_000245703.1 | host cell division inhibitor Icd-like protein | - |
| CXB56_RS00085 () | 13429..14103 | + | 675 | WP_032326155.1 | hypothetical protein | - |
| CXB56_RS27495 () | 14155..14631 | + | 477 | WP_001220699.1 | hypothetical protein | - |
| CXB56_RS00095 () | 14690..15256 | + | 567 | WP_000188919.1 | hypothetical protein | - |
| CXB56_RS00100 () | 15267..15878 | + | 612 | WP_000523980.1 | hypothetical protein | - |
| CXB56_RS00105 () | 15893..16774 | + | 882 | WP_000926353.1 | hypothetical protein | - |
| CXB56_RS00110 () | 16856..20596 | + | 3741 | WP_100728219.1 | transglycosylase SLT domain-containing protein | - |
| CXB56_RS00115 () | 20596..20952 | + | 357 | WP_000002800.1 | hypothetical protein | - |
| CXB56_RS00120 () | 20949..22382 | + | 1434 | WP_029487598.1 | bleomycin hydrolase | - |
| CXB56_RS00125 () | 22382..23218 | + | 837 | WP_001561131.1 | hypothetical protein | - |
| CXB56_RS00130 () | 23297..23731 | + | 435 | WP_029487597.1 | hypothetical protein | - |
| CXB56_RS00135 () | 23743..25797 | + | 2055 | Protein_24 | tail fiber protein | - |
| CXB56_RS00140 () | 25894..26583 | + | 690 | Protein_25 | phage tail protein | - |
| CXB56_RS27500 () | 26578..26973 | + | 396 | Protein_26 | tail fiber protein | - |
| CXB56_RS00145 () | 26983..27234 | + | 252 | Protein_27 | phage tail protein | - |
| CXB56_RS00155 () | 27783..28016 | + | 234 | WP_001619155.1 | hypothetical protein | - |
| CXB56_RS00160 () | 27997..28197 | - | 201 | Protein_29 | tail fiber assembly protein | - |
| CXB56_RS00165 () | 28468..28749 | + | 282 | WP_000332809.1 | hypothetical protein | - |
| CXB56_RS00170 () | 28817..29146 | + | 330 | WP_000887652.1 | holin | - |
| CXB56_RS00175 () | 29143..29586 | + | 444 | WP_000580776.1 | hypothetical protein | - |
| CXB56_RS00180 () | 29573..30175 | + | 603 | WP_000164724.1 | hypothetical protein | - |
| CXB56_RS00185 () | 30177..32096 | + | 1920 | WP_097434456.1 | hypothetical protein | - |
| CXB56_RS00190 () | 32093..32458 | + | 366 | WP_096935682.1 | ddrA | - |
| CXB56_RS00195 () | 32471..35458 | + | 2988 | WP_100728218.1 | hypothetical protein | - |
| CXB56_RS00200 () | 35448..35756 | + | 309 | WP_001165936.1 | hypothetical protein | - |
| CXB56_RS00205 () | 35787..36581 | - | 795 | WP_046644916.1 | hypothetical protein | - |
| CXB56_RS00210 () | 36784..37272 | - | 489 | WP_042032564.1 | single-stranded DNA-binding protein | - |
| CXB56_RS00215 () | 37442..37999 | + | 558 | WP_100728217.1 | lysozyme | - |
| CXB56_RS00225 () | 38291..39310 | - | 1020 | WP_029487755.1 | head processing protein | - |
| CXB56_RS00230 () | 39303..41012 | - | 1710 | WP_100728216.1 | phage portal protein | - |
| CXB56_RS00235 () | 41199..41708 | + | 510 | Protein_43 | SAM-dependent DNA methyltransferase | - |
| CXB56_RS00240 () | 41784..44801 | - | 3018 | WP_004199413.1 | Tn3 family transposase TnpA_IS3000 | Transposase |
| CXB56_RS00245 () | 45604..51096 | + | 5493 | WP_100728243.1 | helicase | - |
| CXB56_RS00250 () | 51130..51570 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| CXB56_RS00255 () | 51567..51815 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| CXB56_RS00260 () | 51862..53169 | - | 1308 | WP_100728241.1 | SIR2 family protein | - |
| CXB56_RS00265 () | 53226..53867 | - | 642 | WP_023156639.1 | hypothetical protein | - |
| CXB56_RS00270 () | 54056..54616 | - | 561 | WP_000848374.1 | Ref family protein | - |
| CXB56_RS00275 () | 54866..55177 | - | 312 | WP_097434472.1 | lysogeny establishment protein | - |
| CXB56_RS00280 () | 55228..56259 | - | 1032 | WP_016240429.1 | tyrosine-type recombinase/integrase | - |
| CXB56_RS00285 () | 56267..56488 | - | 222 | WP_000542335.1 | hypothetical protein | - |
| CXB56_RS00300 () | 57093..57302 | + | 210 | WP_000874156.1 | hypothetical protein | - |
| CXB56_RS00305 () | 57413..58264 | + | 852 | WP_000611666.1 | hypothetical protein | - |
| CXB56_RS00310 () | 58297..59319 | - | 1023 | WP_100728242.1 | phage antirepressor KilAC domain-containing protein | - |
| CXB56_RS00315 () | 59344..60552 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| CXB56_RS00320 () | 60744..61307 | - | 564 | WP_072157203.1 | host cell division inhibitor Icd-like protein | - |
| CXB56_RS00325 () | 61304..62788 | - | 1485 | WP_089046482.1 | terminase | - |
| CXB56_RS00330 () | 62788..63981 | - | 1194 | WP_000219605.1 | terminase | - |
| CXB56_RS00335 () | 64068..64520 | - | 453 | WP_001312282.1 | late promoter-activating protein (Gp10) | - |
| CXB56_RS00340 () | 64609..65652 | - | 1044 | WP_000648824.1 | DUF968 domain-containing protein | - |
| CXB56_RS00345 () | 65680..65859 | - | 180 | WP_000113018.1 | hypothetical protein | - |
| CXB56_RS00350 () | 65864..66244 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| CXB56_RS00355 () | 66244..66465 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CXB56_RS00360 () | 66538..66927 | - | 390 | WP_000506726.1 | DNA repair protein | - |
| CXB56_RS00365 () | 67051..67302 | - | 252 | WP_001283837.1 | DNA polymerase III subunit theta | - |
| CXB56_RS00370 () | 67476..67685 | + | 210 | WP_001344848.1 | hypothetical protein | - |
| CXB56_RS27505 () | 67670..67942 | - | 273 | WP_176398880.1 | antitoxin PHD | - |
| CXB56_RS00375 () | 67916..68527 | - | 612 | Protein_70 | hypothetical protein | - |
| CXB56_RS00380 () | 68509..68883 | - | 375 | WP_033553822.1 | hypothetical protein | - |
| CXB56_RS00385 () | 68890..69183 | - | 294 | WP_033553821.1 | hypothetical protein | - |
| CXB56_RS00390 () | 69362..69595 | - | 234 | WP_000517420.1 | hypothetical protein | - |
| CXB56_RS00395 () | 69672..69932 | - | 261 | WP_033553819.1 | hypothetical protein | - |
| CXB56_RS00400 () | 69929..70726 | - | 798 | WP_100728230.1 | DUF551 domain-containing protein | - |
| CXB56_RS00405 () | 70728..71372 | - | 645 | WP_100728229.1 | ead/Ea22-like family protein | - |
| CXB56_RS00410 () | 71369..72019 | - | 651 | WP_089046486.1 | ead/Ea22-like family protein | - |
| CXB56_RS00415 () | 72016..72255 | - | 240 | WP_023352820.1 | hypothetical protein | - |
| CXB56_RS00420 () | 72248..72451 | - | 204 | WP_000158004.1 | hypothetical protein | - |
| CXB56_RS00425 () | 72535..73263 | - | 729 | WP_023153717.1 | hypothetical protein | - |
| CXB56_RS00430 () | 73458..73964 | - | 507 | WP_000021768.1 | hypothetical protein | - |
| CXB56_RS00435 () | 74037..75299 | - | 1263 | WP_000107690.1 | hypothetical protein | - |
| CXB56_RS00445 () | 75601..76302 | - | 702 | WP_000684845.1 | hypothetical protein | - |
| CXB56_RS00450 () | 76299..76976 | - | 678 | WP_001354545.1 | metallophosphoesterase | - |
| CXB56_RS00455 () | 76973..77599 | - | 627 | WP_076487244.1 | norphogenetic protein | - |
| CXB56_RS00465 () | 78101..78256 | - | 156 | WP_000095381.1 | hypothetical protein | - |
| CXB56_RS00470 () | 78323..78901 | - | 579 | WP_050858714.1 | VRR-NUC domain-containing protein | - |
| CXB56_RS00475 () | 78904..79149 | - | 246 | WP_100728227.1 | hypothetical protein | - |
| CXB56_RS00480 () | 79296..79673 | + | 378 | WP_000235786.1 | hypothetical protein | - |
| CXB56_RS00485 () | 79683..80900 | + | 1218 | WP_063270113.1 | hypothetical protein | - |
| CXB56_RS00490 () | 80904..81632 | + | 729 | WP_000896806.1 | hypothetical protein | - |
| CXB56_RS00495 () | 81619..82404 | + | 786 | WP_046659850.1 | hypothetical protein | - |
| CXB56_RS00500 () | 82406..83422 | + | 1017 | WP_000212018.1 | hypothetical protein | - |
| CXB56_RS00505 () | 83415..84047 | + | 633 | WP_000535208.1 | hypothetical protein | - |
| CXB56_RS00510 () | 84094..85092 | - | 999 | WP_023155375.1 | hypothetical protein | - |
| CXB56_RS00515 () | 85092..86456 | - | 1365 | WP_001276603.1 | replicative DNA helicase | - |
| CXB56_RS00530 () | 86929..87093 | - | 165 | WP_120405788.1 | DUF3927 family protein | - |
| CXB56_RS00535 () | 87093..87518 | - | 426 | WP_100728225.1 | tellurite resistance TerB family protein | - |
| CXB56_RS27145 () | 88760..89017 | + | 258 | WP_162751176.1 | hypothetical protein | - |
| CXB56_RS00555 () | 89076..92117 | - | 3042 | WP_100728224.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| CXB56_RS00560 () | 92114..93019 | - | 906 | WP_100728223.1 | recombination-associated protein RdgC | - |
| CXB56_RS00565 () | 93012..93296 | - | 285 | WP_100728222.1 | hypothetical protein | - |
| CXB56_RS00575 () | 93758..94546 | + | 789 | WP_100728221.1 | hypothetical protein | - |
| CXB56_RS00580 () | 94586..95008 | + | 423 | WP_000007771.1 | hypothetical protein | - |
| CXB56_RS00585 () | 95186..95578 | + | 393 | WP_001281114.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|