MGE detailed information
MGE type: Prophage MGE length: 41033 bp
Accession: NZ_CP027140 Location: 4317620..4358652 Organism: Escherichia coli strain AR_0369 Replicon: chromosome
Accession: NZ_CP027140 Location: 4317620..4358652 Organism: Escherichia coli strain AR_0369 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC06_RS24360 () | 4312871..4313581 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| CSC06_RS24365 () | 4313584..4314144 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| CSC06_RS24370 () | 4314179..4314520 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| CSC06_RS24375 () | 4314655..4314981 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| CSC06_RS24385 () | 4315187..4316401 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CSC06_RS24390 () | 4316413..4317432 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| CSC06_RS24400 () | 4317620..4318900 | - | 1281 | WP_021533434.1 | site-specific integrase | - |
| CSC06_RS24405 () | 4318935..4319186 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| CSC06_RS24410 () | 4319259..4321730 | - | 2472 | WP_000048324.1 | exonuclease | - |
| CSC06_RS24415 () | 4321824..4322015 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| CSC06_RS24420 () | 4322012..4322200 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| CSC06_RS24425 () | 4322687..4323262 | - | 576 | WP_000344954.1 | hypothetical protein | - |
| CSC06_RS24430 () | 4323264..4323419 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| CSC06_RS24435 () | 4323612..4324019 | - | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| CSC06_RS24440 () | 4324097..4324324 | + | 228 | WP_000476993.1 | transcriptional regulator | - |
| CSC06_RS24445 () | 4324308..4324829 | + | 522 | WP_000705349.1 | hypothetical protein | - |
| CSC06_RS24450 () | 4324810..4325775 | + | 966 | WP_000054504.1 | hypothetical protein | - |
| CSC06_RS24455 () | 4325816..4326235 | + | 420 | WP_001151196.1 | DUF977 family protein | - |
| CSC06_RS24460 () | 4326269..4327609 | + | 1341 | WP_000589012.1 | ISNCY family transposase | - |
| CSC06_RS24470 () | 4328046..4328378 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| CSC06_RS24475 () | 4328581..4328886 | - | 306 | WP_071527819.1 | hypothetical protein | - |
| CSC06_RS24480 () | 4328911..4329150 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CSC06_RS24485 () | 4329150..4329437 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CSC06_RS24490 () | 4329509..4329664 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CSC06_RS24495 () | 4329881..4330132 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| CSC06_RS24500 () | 4330199..4330477 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| CSC06_RS24505 () | 4330479..4331528 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| CSC06_RS24510 () | 4331542..4332294 | + | 753 | WP_001047135.1 | antitermination protein | - |
| CSC06_RS26290 () | 4332572..4332661 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| CSC06_RS24515 () | 4332716..4332928 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CSC06_RS24520 () | 4333229..4333444 | + | 216 | WP_105394433.1 | cold shock-like protein CspB | - |
| CSC06_RS26730 () | 4333808..4333978 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| CSC06_RS24525 () | 4334198..4334413 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CSC06_RS24530 () | 4334418..4334729 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| CSC06_RS24535 () | 4334726..4335259 | + | 534 | WP_001092971.1 | lysozyme | - |
| CSC06_RS24540 () | 4335256..4335753 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| CSC06_RS24545 () | 4336116..4336328 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CSC06_RS24550 () | 4336339..4336527 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| CSC06_RS26295 () | 4336530..4336595 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| CSC06_RS26300 () | 4336675..4336830 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| CSC06_RS24560 () | 4337002..4337175 | + | 174 | WP_001019139.1 | addiction module toxin, GnsA/GnsB family | - |
| CSC06_RS24565 () | 4337327..4337758 | - | 432 | WP_000035576.1 | DUF1398 domain-containing protein | - |
| CSC06_RS24575 () | 4338059..4338265 | + | 207 | WP_001031431.1 | hypothetical protein | - |
| CSC06_RS24580 () | 4338826..4339365 | + | 540 | WP_000421825.1 | DUF1441 family protein | - |
| CSC06_RS26615 () | 4339374..4340369 | + | 996 | Protein_4118 | phage terminase large subunit family protein | - |
| CSC06_RS24585 () | 4340361..4343456 | + | 3096 | WP_206354220.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CSC06_RS24590 () | 4343508..4343630 | + | 123 | Protein_4120 | tail fiber assembly protein | - |
| CSC06_RS24595 () | 4343728..4344318 | - | 591 | WP_000086530.1 | recombinase family protein | - |
| CSC06_RS24600 () | 4344635..4344868 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CSC06_RS26305 () | 4344937..4345050 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| CSC06_RS24605 () | 4345654..4346937 | + | 1284 | Protein_4124 | MHS family MFS transporter YdfJ | - |
| CSC06_RS24610 () | 4347026..4348485 | + | 1460 | Protein_4125 | mannitol dehydrogenase family protein | - |
| CSC06_RS24615 () | 4348521..4348724 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CSC06_RS24620 () | 4348901..4349587 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| CSC06_RS24625 () | 4349676..4350422 | - | 747 | WP_105394434.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| CSC06_RS24635 () | 4350559..4352604 | + | 2046 | WP_000210376.1 | peptidyl-dipeptidase Dcp | - |
| CSC06_RS24645 () | 4352649..4353167 | - | 519 | WP_016242129.1 | 2-oxo-tetronate isomerase | - |
| CSC06_RS24650 () | 4353443..4353835 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| CSC06_RS24655 () | 4354090..4354980 | + | 891 | Protein_4132 | diguanylate cyclase DgcZ | - |
| CSC06_RS26735 () | 4355095..4355199 | - | 105 | WP_211180496.1 | protein MgtT | - |
| CSC06_RS24660 () | 4355199..4355294 | - | 96 | WP_000901367.1 | protein MgtS | - |
| CSC06_RS24665 () | 4355421..4356608 | - | 1188 | WP_001054189.1 | efflux MFS transporter YdeE | - |
| CSC06_RS24670 () | 4356803..4357702 | + | 900 | WP_000087216.1 | O-acetylserine/cysteine exporter | - |
| CSC06_RS24675 () | 4357747..4357902 | - | 156 | Protein_4137 | UTRA domain-containing protein | - |
| CSC06_RS24685 () | 4357955..4358652 | + | 698 | Protein_4138 | IS1 family transposase | - |
| CSC06_RS24690 () | 4358667..4359221 | - | 555 | Protein_4139 | GntR family transcriptional regulator | - |
| CSC06_RS24695 () | 4359420..4359731 | + | 312 | WP_000722572.1 | PTS sugar transporter subunit IIB | - |
| CSC06_RS24700 () | 4359846..4361168 | + | 1323 | WP_096860003.1 | PTS sugar transporter subunit IIC | - |
| CSC06_RS24705 () | 4361196..4361507 | + | 312 | WP_001459752.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| CSC06_RS24710 () | 4361563..4363235 | + | 1673 | Protein_4143 | carbohydrate porin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|