MGE detailed information
MGE type: Prophage MGE length: 51844 bp
Accession: NZ_CP027134 Location: 2556935..2608778 Organism: Escherichia coli strain AR_0372 Replicon: chromosome
Accession: NZ_CP027134 Location: 2556935..2608778 Organism: Escherichia coli strain AR_0372 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC09_RS14825 () | 2552251..2553078 | + | 828 | WP_000983718.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| CSC09_RS14830 () | 2553075..2553932 | + | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| CSC09_RS14835 () | 2553929..2554786 | + | 858 | WP_000968125.1 | iron/manganese ABC transporter permease subunit SitD | - |
| CSC09_RS14840 () | 2555259..2556053 | + | 795 | WP_000354607.1 | hypothetical protein | - |
| CSC09_RS14845 () | 2556178..2556329 | + | 152 | Protein_2360 | DinI-like family protein | - |
| CSC09_RS14850 () | 2556599..2556892 | - | 294 | WP_001405873.1 | hypothetical protein | - |
| CSC09_RS14855 () | 2556935..2557975 | - | 1041 | WP_001314683.1 | tail fiber domain-containing protein | - |
| CSC09_RS14860 () | 2557985..2558266 | - | 282 | WP_000654155.1 | hypothetical protein | - |
| CSC09_RS14865 () | 2558266..2560641 | - | 2376 | WP_042099016.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CSC09_RS14870 () | 2560762..2561220 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| CSC09_RS14880 () | 2561417..2562016 | - | 600 | WP_001542091.1 | Spermidine-binding periplasmic protein SpuE | VF |
| CSC09_RS14885 () | 2562084..2565563 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| CSC09_RS14890 () | 2565624..2566226 | - | 603 | WP_049286672.1 | tail assembly protein | - |
| CSC09_RS14895 () | 2566163..2566906 | - | 744 | WP_032153655.1 | C40 family peptidase | - |
| CSC09_RS14900 () | 2566912..2567610 | - | 699 | WP_001551186.1 | phage minor tail protein L | - |
| CSC09_RS14905 () | 2567610..2567939 | - | 330 | WP_000847345.1 | phage tail protein | - |
| CSC09_RS14910 () | 2567936..2570497 | - | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| CSC09_RS14915 () | 2570490..2570924 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| CSC09_RS14920 () | 2570906..2571328 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| CSC09_RS14925 () | 2571344..2572084 | - | 741 | WP_001349920.1 | phage tail protein | - |
| CSC09_RS14930 () | 2572092..2572487 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| CSC09_RS14935 () | 2572484..2573063 | - | 580 | Protein_2377 | phage tail protein | - |
| CSC09_RS14940 () | 2573075..2573428 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| CSC09_RS14945 () | 2573440..2573838 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| CSC09_RS14950 () | 2573880..2574905 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| CSC09_RS14955 () | 2574960..2575292 | - | 333 | WP_001708751.1 | head decoration protein | - |
| CSC09_RS14960 () | 2575302..2576621 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| CSC09_RS14965 () | 2576602..2578203 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| CSC09_RS14970 () | 2578200..2578406 | - | 207 | WP_000198149.1 | gpW family protein | - |
| CSC09_RS14975 () | 2578403..2580328 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| CSC09_RS14980 () | 2580303..2580848 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| CSC09_RS14990 () | 2581237..2581470 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| CSC09_RS14995 () | 2581528..2581938 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| CSC09_RS15000 () | 2582090..2582263 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| CSC09_RS28950 () | 2582435..2582590 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| CSC09_RS28955 () | 2582670..2582735 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| CSC09_RS15010 () | 2582738..2582926 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| CSC09_RS15015 () | 2582937..2583149 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CSC09_RS15020 () | 2583512..2584009 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| CSC09_RS15025 () | 2584006..2584539 | - | 534 | WP_001092971.1 | lysozyme | - |
| CSC09_RS15030 () | 2584536..2584847 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| CSC09_RS15035 () | 2584852..2585067 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CSC09_RS29500 () | 2585287..2585457 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| CSC09_RS15040 () | 2585821..2586036 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CSC09_RS15045 () | 2586337..2586549 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CSC09_RS28960 () | 2586604..2586693 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| CSC09_RS15050 () | 2586971..2587723 | - | 753 | WP_001047135.1 | antitermination protein | - |
| CSC09_RS15055 () | 2587737..2588786 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| CSC09_RS15060 () | 2588788..2589066 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| CSC09_RS15065 () | 2589133..2589384 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| CSC09_RS15070 () | 2589601..2589756 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CSC09_RS15075 () | 2589828..2590115 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CSC09_RS15080 () | 2590115..2590354 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CSC09_RS15085 () | 2590379..2590684 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| CSC09_RS15090 () | 2590887..2591219 | + | 333 | WP_001301033.1 | protein FlxA | - |
| CSC09_RS15100 () | 2591656..2592969 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| CSC09_RS15105 () | 2593453..2594481 | - | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| CSC09_RS15110 () | 2594478..2595092 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| CSC09_RS15115 () | 2595301..2595966 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| CSC09_RS15120 () | 2596169..2596567 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| CSC09_RS15125 () | 2596608..2597573 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| CSC09_RS15130 () | 2597554..2598075 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| CSC09_RS15135 () | 2598059..2598286 | - | 228 | WP_000921596.1 | transcriptional regulator | - |
| CSC09_RS15140 () | 2598367..2598774 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| CSC09_RS15145 () | 2598943..2599098 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| CSC09_RS15150 () | 2599100..2599675 | + | 576 | WP_000344950.1 | hypothetical protein | - |
| CSC09_RS15155 () | 2600162..2600350 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| CSC09_RS15160 () | 2600347..2600538 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| CSC09_RS15165 () | 2600632..2603103 | + | 2472 | WP_000048363.1 | exonuclease | - |
| CSC09_RS15170 () | 2603176..2603427 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| CSC09_RS15175 () | 2603462..2604742 | + | 1281 | WP_021523105.1 | 2-halobenzoate 1,2-dioxygenase small subunit ; Integrase | Integrase |
| CSC09_RS15185 () | 2604930..2605949 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| CSC09_RS15190 () | 2605961..2607175 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CSC09_RS15200 () | 2607381..2607707 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| CSC09_RS15205 () | 2607842..2608183 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| CSC09_RS15210 () | 2608218..2608778 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| CSC09_RS15215 () | 2608781..2609491 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| CSC09_RS15220 () | 2609599..2609904 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| CSC09_RS15225 () | 2610103..2612529 | + | 2427 | WP_001551145.1 | dimethyl sulfoxide reductase subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|