MGE detailed information
MGE type: Prophage MGE length: 61668 bp
Accession: NZ_CP027134 Location: 2296709..2358376 Organism: Escherichia coli strain AR_0372 Replicon: chromosome
Accession: NZ_CP027134 Location: 2296709..2358376 Organism: Escherichia coli strain AR_0372 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC09_RS13505 () | 2291990..2293018 | + | 1029 | WP_001523164.1 | HlyD family secretion protein | - |
| CSC09_RS13510 () | 2293015..2294529 | + | 1515 | WP_020233354.1 | DHA2 family efflux MFS transporter permease subunit | - |
| CSC09_RS13515 () | 2294724..2295287 | + | 564 | WP_001046832.1 | DNA endonuclease SmrA | - |
| CSC09_RS13520 () | 2295308..2296240 | - | 933 | WP_020233353.1 | sensor domain-containing diguanylate cyclase | - |
| CSC09_RS13525 () | 2296305..2297002 | + | 698 | Protein_2113 | IS1 family transposase | - |
| CSC09_RS13530 () | 2297018..2297317 | - | 300 | Protein_2114 | sensor domain-containing diguanylate cyclase | - |
| CSC09_RS29485 () | 2297511..2297558 | + | 48 | WP_211180494.1 | protein YnaN | - |
| CSC09_RS13535 () | 2297572..2298555 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| CSC09_RS13545 () | 2299033..2300406 | + | 1374 | WP_000123748.1 | ATP-dependent RNA helicase DbpA | - |
| CSC09_RS13550 () | 2300535..2301470 | - | 936 | WP_001523172.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| CSC09_RS13555 () | 2301522..2302757 | - | 1236 | WP_000040839.1 | Phosphoenolpyruvate synthase regulatory protein ; Integrase | Integrase |
| CSC09_RS13560 () | 2302759..2302974 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| CSC09_RS13565 () | 2303074..2303262 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 2303078..2303256 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2303078..2303256 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2303078..2303256 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2303078..2303256 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| CSC09_RS13570 () | 2303300..2303449 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| CSC09_RS13575 () | 2303505..2304314 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| CSC09_RS13580 () | 2304307..2306907 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| CSC09_RS13585 () | 2307009..2307284 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| CSC09_RS13590 () | 2307359..2307529 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| CSC09_RS13595 () | 2307529..2307750 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| CSC09_RS13605 () | 2308192..2308680 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| CSC09_RS13610 () | 2308677..2308832 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| CSC09_RS13615 () | 2308843..2309022 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| CSC09_RS13625 () | 2309265..2309684 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| CSC09_RS13630 () | 2309764..2310018 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| CSC09_RS13635 () | 2310015..2310437 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| CSC09_RS13640 () | 2310515..2311303 | + | 789 | WP_001396581.1 | hypothetical protein | - |
| CSC09_RS13645 () | 2311310..2312056 | + | 747 | WP_020233967.1 | ATP-binding protein | - |
| CSC09_RS13650 () | 2312079..2312840 | + | 762 | WP_123876605.1 | DUF1627 domain-containing protein | - |
| CSC09_RS13655 () | 2312856..2313278 | + | 423 | WP_029702111.1 | DUF977 family protein | - |
| CSC09_RS28910 () | 2313440..2313943 | + | 504 | WP_000137958.1 | hypothetical protein | - |
| CSC09_RS13670 () | 2314064..2314837 | - | 774 | WP_000200358.1 | KilA-N domain-containing protein | - |
| CSC09_RS13675 () | 2315360..2315485 | + | 126 | WP_001445775.1 | type I toxin-antitoxin system Hok family toxin | - |
| CSC09_RS13680 () | 2315568..2315909 | - | 342 | WP_001445776.1 | DUF1971 domain-containing protein | - |
| CSC09_RS13685 () | 2316777..2317376 | + | 600 | WP_000940344.1 | DUF1367 family protein | - |
| CSC09_RS13690 () | 2317376..2317666 | + | 291 | WP_000228032.1 | DUF1364 domain-containing protein | - |
| CSC09_RS13695 () | 2317663..2318205 | + | 543 | WP_000640106.1 | DUF1133 family protein | - |
| CSC09_RS13700 () | 2318427..2318996 | + | 570 | WP_001208722.1 | hypothetical protein | - |
| CSC09_RS13705 () | 2318965..2319267 | - | 303 | WP_001328752.1 | hypothetical protein | - |
| CSC09_RS13710 () | 2319344..2319685 | + | 342 | WP_000781775.1 | phage holin, lambda family | - |
| CSC09_RS13715 () | 2319689..2320165 | + | 477 | WP_023153991.1 | glycoside hydrolase family protein | - |
| CSC09_RS13720 () | 2320382..2320567 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| CSC09_RS13725 () | 2320764..2322221 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| CSC09_RS13735 () | 2322359..2323150 | + | 792 | WP_001291105.1 | ParB/Srx family N-terminal domain-containing protein | - |
| CSC09_RS13740 () | 2323143..2324075 | + | 933 | WP_020233805.1 | hypothetical protein | - |
| CSC09_RS13745 () | 2324011..2324262 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| CSC09_RS13750 () | 2324266..2325360 | + | 1095 | WP_000089448.1 | terminase small subunit | - |
| CSC09_RS13755 () | 2325341..2326642 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| CSC09_RS13760 () | 2326645..2328051 | + | 1407 | WP_000763701.1 | DUF4055 domain-containing protein | - |
| CSC09_RS13765 () | 2328035..2329147 | + | 1113 | WP_001363932.1 | hypothetical protein | - |
| CSC09_RS13770 () | 2329252..2330016 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| CSC09_RS13775 () | 2330115..2331254 | + | 1140 | WP_020233804.1 | hypothetical protein | - |
| CSC09_RS29240 () | 2331297..2331473 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| CSC09_RS13780 () | 2331477..2331872 | + | 396 | WP_057950804.1 | hypothetical protein | - |
| CSC09_RS13785 () | 2331872..2332255 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| CSC09_RS13790 () | 2332256..2332636 | + | 381 | WP_042002565.1 | hypothetical protein | - |
| CSC09_RS13795 () | 2332633..2333025 | + | 393 | WP_000673077.1 | hypothetical protein | - |
| CSC09_RS13800 () | 2333052..2334014 | + | 963 | WP_001328756.1 | hypothetical protein | - |
| CSC09_RS13805 () | 2334165..2334524 | + | 360 | WP_122452218.1 | hypothetical protein | - |
| CSC09_RS13810 () | 2334632..2334832 | + | 201 | WP_032139919.1 | hypothetical protein | - |
| CSC09_RS13815 () | 2334996..2338229 | + | 3234 | WP_023153989.1 | phage tail tape measure protein | - |
| CSC09_RS13820 () | 2338222..2338560 | + | 339 | WP_000024051.1 | phage tail protein | - |
| CSC09_RS13825 () | 2338560..2339258 | + | 699 | WP_001152432.1 | phage minor tail protein L | - |
| CSC09_RS13830 () | 2339264..2340007 | + | 744 | WP_001351716.1 | C40 family peptidase | - |
| CSC09_RS13835 () | 2339944..2340546 | + | 603 | WP_049286672.1 | tail assembly protein | - |
| CSC09_RS13840 () | 2340607..2344086 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| CSC09_RS13845 () | 2344154..2344753 | + | 600 | WP_001542091.1 | 3-mercaptopropionate dioxygenase | VF |
| CSC09_RS13850 () | 2344818..2347217 | + | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CSC09_RS13855 () | 2347214..2347495 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| CSC09_RS13860 () | 2347505..2348209 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| CSC09_RS13865 () | 2348220..2348513 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| CSC09_RS13870 () | 2348533..2348643 | + | 111 | Protein_2179 | tail fiber assembly protein | - |
| CSC09_RS13875 () | 2348741..2349331 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CSC09_RS13880 () | 2349648..2349881 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CSC09_RS28920 () | 2349950..2350063 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| CSC09_RS13885 () | 2350667..2351950 | + | 1284 | Protein_2183 | MHS family MFS transporter YdfJ | - |
| CSC09_RS13890 () | 2352039..2353499 | + | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| CSC09_RS13895 () | 2353535..2353738 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CSC09_RS13900 () | 2353916..2354602 | - | 687 | WP_000215553.1 | DNA-binding transcriptional regulator YdfH | - |
| CSC09_RS13905 () | 2354691..2355437 | - | 747 | WP_000636571.1 | Iron-uptake system permease protein FeuC | VF |
| CSC09_RS13915 () | 2355574..2357619 | + | 2046 | WP_001523328.1 | peptidyl-dipeptidase Dcp | - |
| CSC09_RS13925 () | 2357984..2358376 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| CSC09_RS13930 () | 2358631..2359521 | + | 891 | WP_001523326.1 | diguanylate cyclase DgcZ | - |
| CSC09_RS29490 () | 2359636..2359740 | - | 105 | WP_211180496.1 | protein MgtT | - |
| CSC09_RS13935 () | 2359740..2359835 | - | 96 | WP_000901367.1 | protein MgtS | - |
| CSC09_RS13940 () | 2359962..2361149 | - | 1188 | WP_001523325.1 | efflux MFS transporter YdeE | - |
| CSC09_RS13945 () | 2361344..2362243 | + | 900 | WP_000087220.1 | O-acetylserine/cysteine exporter | - |
| CSC09_RS13950 () | 2362288..2362986 | - | 699 | WP_020233615.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|