MGE detailed information
MGE type: Genomic_island MGE length: 75897 bp
Accession: NZ_CP027126 Location: 2320870..2396766 Organism: Escherichia coli strain AR_0374 Replicon: chromosome
Accession: NZ_CP027126 Location: 2320870..2396766 Organism: Escherichia coli strain AR_0374 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC11_RS12255 () | 2316189..2317091 | - | 903 | WP_000832227.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| CSC11_RS12260 () | 2317111..2317614 | - | 504 | WP_000872004.1 | type 1 fimbria minor subunit FimG | - |
| CSC11_RS12265 () | 2317627..2318157 | - | 531 | WP_001244823.1 | type 1 fimbria minor subunit FimF | - |
| CSC11_RS12270 () | 2318167..2320803 | - | 2637 | WP_000120944.1 | fimbrial usher FimD | - |
| CSC11_RS12275 () | 2320870..2321595 | - | 726 | WP_000066573.1 | 50S ribosomal protein L32 | VF |
| CSC11_RS12280 () | 2321632..2322171 | - | 540 | WP_000824114.1 | Large ribosomal RNA subunit accumulation protein YceD | VF |
| CSC11_RS12285 () | 2322236..2322784 | - | 549 | WP_000695543.1 | Maf-like protein YceF | VF |
| CSC11_RS12295 () | 2323264..2323860 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| CSC11_RS12300 () | 2324338..2324940 | - | 603 | WP_000790583.1 | Ribosomal large subunit pseudouridine synthase C | VF |
| CSC11_RS12315 () | 2326397..2327113 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| CSC11_RS12320 () | 2327133..2328239 | + | 1107 | WP_001331344.1 | N-acetylneuraminate epimerase | - |
| CSC11_RS12325 () | 2328304..2329284 | + | 981 | WP_000991444.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| CSC11_RS12330 () | 2329496..2330368 | + | 873 | WP_000168592.1 | HNH endonuclease | - |
| CSC11_RS12335 () | 2330538..2332613 | + | 2076 | WP_000177023.1 | AAA family ATPase | - |
| CSC11_RS12340 () | 2332606..2333949 | + | 1344 | WP_000504877.1 | McrC family protein | - |
| CSC11_RS12345 () | 2333946..2334332 | + | 387 | WP_000148644.1 | hypothetical protein | - |
| CSC11_RS12350 () | 2334383..2336530 | + | 2148 | WP_001040176.1 | N-6 DNA methylase | - |
| CSC11_RS12355 () | 2336530..2337984 | + | 1455 | WP_000109895.1 | restriction endonuclease subunit S | - |
| CSC11_RS12360 () | 2338020..2339306 | + | 1287 | WP_000377419.1 | hypothetical protein | - |
| CSC11_RS12365 () | 2339303..2343589 | + | 4287 | WP_000007257.1 | hypothetical protein | - |
| CSC11_RS12370 () | 2343600..2344448 | + | 849 | WP_000092642.1 | hypothetical protein | - |
| CSC11_RS12375 () | 2344451..2345608 | + | 1158 | WP_001004904.1 | hypothetical protein | - |
| CSC11_RS12380 () | 2345598..2347283 | + | 1686 | WP_000323666.1 | ATP-binding protein | - |
| CSC11_RS12385 () | 2347420..2347833 | + | 414 | WP_001368082.1 | hypothetical protein | - |
| CSC11_RS12390 () | 2347830..2349299 | + | 1470 | WP_001022619.1 | Flagellar basal body rod protein FlgB | VF |
| CSC11_RS12395 () | 2349500..2350765 | - | 1266 | WP_001218329.1 | Flagella basal body P-ring formation protein FlgA ; Integrase | Integrase |
| CSC11_RS26460 () | 2351227..2351373 | - | 147 | WP_001290178.1 | hypothetical protein | - |
| CSC11_RS12405 () | 2351458..2351655 | - | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| CSC11_RS12410 () | 2351675..2352163 | - | 489 | WP_000761685.1 | hypothetical protein | - |
| CSC11_RS12415 () | 2352160..2352537 | - | 378 | WP_001094443.1 | TA system toxin CbtA family protein | Toxin Detail |
| CSC11_RS12420 () | 2352627..2352995 | - | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CSC11_RS12425 () | 2353075..2353296 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| CSC11_RS12430 () | 2353383..2353859 | - | 477 | WP_001186165.1 | RadC family protein | - |
| CSC11_RS12435 () | 2353874..2354359 | - | 486 | WP_000206664.1 | antirestriction protein | - |
| CSC11_RS12440 () | 2354451..2355269 | - | 819 | WP_001175163.1 | DUF945 domain-containing protein | - |
| CSC11_RS12445 () | 2355359..2355592 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| CSC11_RS12450 () | 2355598..2356275 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| CSC11_RS12455 () | 2356423..2357103 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| CSC11_RS12460 () | 2357306..2358190 | - | 885 | WP_000010383.1 | 50S ribosome-binding GTPase | - |
| CSC11_RS12465 () | 2358296..2359258 | + | 963 | WP_000126799.1 | hypothetical protein | - |
| CSC11_RS12470 () | 2359255..2360109 | - | 855 | WP_000110727.1 | hypothetical protein | - |
| CSC11_RS12480 () | 2361729..2362259 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| CSC11_RS12490 () | 2362929..2363660 | + | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| CSC11_RS12495 () | 2363876..2364658 | - | 783 | WP_072133117.1 | IS21 family transposase IS100kyp | Transposase |
| CSC11_RS12500 () | 2364655..2365677 | - | 1023 | WP_001295213.1 | IS21 family transposase IS100kyp | Transposase |
| CSC11_RS26190 () | 2365691..2366185 | - | 495 | WP_123906543.1 | phage terminase large subunit family protein | - |
| CSC11_RS12510 () | 2366130..2366612 | - | 483 | WP_000538703.1 | hypothetical protein | - |
| CSC11_RS12515 () | 2366816..2367319 | + | 504 | WP_001072164.1 | SLATT domain-containing protein | - |
| CSC11_RS12520 () | 2367322..2368098 | + | 777 | WP_000218942.1 | nucleotidyltransferase domain-containing protein | - |
| CSC11_RS12525 () | 2368377..2368724 | - | 348 | WP_001617303.1 | hypothetical protein | - |
| CSC11_RS12530 () | 2369375..2370178 | + | 804 | WP_001609855.1 | hypothetical protein | - |
| CSC11_RS12540 () | 2370364..2370915 | + | 552 | WP_000387046.1 | hypothetical protein | - |
| CSC11_RS12545 () | 2371164..2371613 | + | 450 | WP_001609859.1 | hypothetical protein | - |
| CSC11_RS12550 () | 2371651..2372472 | + | 822 | WP_000900255.1 | hypothetical protein | - |
| CSC11_RS12555 () | 2372543..2373334 | + | 792 | WP_000902464.1 | hypothetical protein | - |
| CSC11_RS12570 () | 2375093..2375694 | + | 602 | Protein_2233 | IS481 family transposase ISKpn28 | Transposase |
| CSC11_RS26470 () | 2377390..2377527 | + | 138 | WP_001611300.1 | hypothetical protein | - |
| CSC11_RS12580 () | 2377597..2378805 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| CSC11_RS12585 () | 2378821..2378940 | - | 120 | Protein_2236 | LysR family transcriptional regulator | - |
| CSC11_RS12590 () | 2379171..2380376 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| CSC11_RS12595 () | 2380820..2381140 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| CSC11_RS12600 () | 2381133..2381519 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| CSC11_RS12605 () | 2381527..2382213 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| CSC11_RS12610 () | 2382191..2382814 | - | 624 | WP_000088605.1 | Bifunctional protein PutA | VF |
| CSC11_RS12615 () | 2382896..2384101 | + | 1206 | WP_001089068.1 | Bifunctional protein PutA | ARG |
| CSC11_RS12620 () | 2384214..2384807 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| CSC11_RS12625 () | 2384940..2385311 | + | 372 | WP_035689358.1 | Ribulokinase | VF |
| CSC11_RS12630 () | 2385321..2386529 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| CSC11_RS12640 () | 2386636..2387112 | + | 477 | Protein_2246 | inovirus-type Gp2 protein | - |
| CSC11_RS12645 () | 2387359..2387934 | + | 576 | WP_000991584.1 | hypothetical protein | - |
| CSC11_RS12650 () | 2388003..2388239 | + | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| CSC11_RS26475 () | 2388236..2388394 | + | 159 | WP_000831911.1 | hypothetical protein | - |
| CSC11_RS12655 () | 2388482..2389030 | + | 549 | WP_001167422.1 | hypothetical protein | - |
| CSC11_RS12660 () | 2389049..2389393 | - | 345 | WP_000166952.1 | ProQ/FinO family protein | - |
| CSC11_RS12670 () | 2390026..2391111 | + | 1086 | WP_000179014.1 | DNA sulfur modification protein DndB | - |
| CSC11_RS12675 () | 2391108..2392742 | + | 1635 | WP_000041168.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| CSC11_RS12680 () | 2392732..2394732 | + | 2001 | WP_000905895.1 | DNA sulfur modification protein DndD | - |
| CSC11_RS12685 () | 2394732..2395088 | + | 357 | WP_000937304.1 | DNA sulfur modification protein DndE | - |
| CSC11_RS12690 () | 2395147..2395953 | - | 807 | WP_071533805.1 | DGQHR domain-containing protein | - |
| CSC11_RS12695 () | 2396002..2396307 | - | 306 | WP_000071509.1 | hypothetical protein | - |
| CSC11_RS12700 () | 2396470..2396766 | + | 297 | WP_001611271.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|