MGE detailed information
MGE type: Prophage MGE length: 69837 bp
Accession: NZ_CP027105 Location: 2321233..2391069 Organism: Escherichia coli strain RM14721 Replicon: chromosome
Accession: NZ_CP027105 Location: 2321233..2391069 Organism: Escherichia coli strain RM14721 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5097_RS12200 () | 2316839..2318256 | - | 1418 | Protein_2183 | diguanylate cyclase | - |
| C5097_RS12210 () | 2318395..2318754 | - | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| C5097_RS12215 () | 2318754..2319680 | - | 927 | WP_089588123.1 | glutaminase B | - |
| C5097_RS12220 () | 2319744..2321132 | - | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| C5097_RS12225 () | 2321233..2322114 | + | 882 | WP_000366501.1 | HTH-type transcriptional regulator GltR | VF |
| C5097_RS12230 () | 2322192..2323307 | + | 1116 | WP_089588124.1 | putative protein YneK | - |
| C5097_RS12235 () | 2323457..2324647 | + | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| C5097_RS12240 () | 2324672..2325337 | - | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| C5097_RS12245 () | 2325458..2325742 | - | 285 | WP_000268704.1 | helix-turn-helix domain-containing protein | - |
| C5097_RS12250 () | 2325732..2326052 | - | 321 | WP_000273128.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C5097_RS12255 () | 2326272..2326706 | + | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| C5097_RS12260 () | 2326727..2327110 | + | 384 | WP_000091199.1 | Multiple antibiotic resistance protein MarA | VF |
| C5097_RS12265 () | 2327142..2327360 | + | 219 | WP_000803653.1 | multiple antibiotic resistance protein MarB | - |
| C5097_RS12270 () | 2327391..2328290 | - | 900 | WP_000087211.1 | O-acetylserine/cysteine exporter | - |
| C5097_RS12275 () | 2328485..2329672 | + | 1188 | WP_086625503.1 | efflux MFS transporter YdeE | - |
| C5097_RS12280 () | 2329799..2329894 | + | 96 | WP_000901367.1 | protein MgtS | - |
| C5097_RS25445 () | 2329894..2329998 | + | 105 | WP_211180496.1 | protein MgtT | - |
| C5097_RS12285 () | 2330113..2331003 | - | 891 | WP_000592802.1 | diguanylate cyclase DgcZ | - |
| C5097_RS12290 () | 2331258..2331650 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| C5097_RS12295 () | 2331928..2332446 | + | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| C5097_RS12300 () | 2332490..2334535 | - | 2046 | WP_089588125.1 | peptidyl-dipeptidase Dcp | - |
| C5097_RS12305 () | 2334672..2335418 | + | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| C5097_RS12310 () | 2335507..2336193 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C5097_RS12315 () | 2336370..2336573 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C5097_RS12320 () | 2336608..2338068 | - | 1461 | WP_089588126.1 | mannitol dehydrogenase family protein | - |
| C5097_RS12325 () | 2338157..2339524 | - | 1368 | Protein_2208 | MHS family MFS transporter | - |
| C5097_RS25100 () | 2340045..2340158 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| C5097_RS12330 () | 2340227..2340460 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| C5097_RS12335 () | 2340777..2341367 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| C5097_RS12340 () | 2341465..2342040 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| C5097_RS12345 () | 2342040..2345114 | - | 3075 | WP_000279139.1 | phage tail protein | - |
| C5097_RS12350 () | 2345179..2345778 | - | 600 | Protein_2214 | Outer membrane protein X | VF |
| C5097_RS12355 () | 2345849..2349262 | - | 3414 | WP_089588128.1 | host specificity protein J | - |
| C5097_RS12360 () | 2349322..2349954 | - | 633 | WP_000090873.1 | tail assembly protein | - |
| C5097_RS12365 () | 2349891..2350634 | - | 744 | WP_089588129.1 | C40 family peptidase | - |
| C5097_RS12370 () | 2350640..2351338 | - | 699 | WP_089588130.1 | phage minor tail protein L | - |
| C5097_RS12375 () | 2351338..2351667 | - | 330 | WP_000847321.1 | phage tail protein | - |
| C5097_RS12380 () | 2351664..2354243 | - | 2580 | WP_089588131.1 | phage tail tape measure protein | - |
| C5097_RS12385 () | 2354236..2354670 | - | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| C5097_RS12390 () | 2354652..2355074 | - | 423 | WP_000479169.1 | phage minor tail protein G | - |
| C5097_RS12395 () | 2355090..2355830 | - | 741 | WP_089568597.1 | phage tail protein | - |
| C5097_RS12400 () | 2355838..2356233 | - | 396 | WP_000683142.1 | phage minor tail U family protein | - |
| C5097_RS12405 () | 2356230..2356808 | - | 579 | WP_000975081.1 | phage tail protein | - |
| C5097_RS12410 () | 2356820..2357173 | - | 354 | WP_000753006.1 | head-tail joining protein | - |
| C5097_RS12415 () | 2357185..2357583 | - | 399 | WP_077780954.1 | DNA-packaging protein FI | - |
| C5097_RS12420 () | 2357625..2358650 | - | 1026 | WP_000063284.1 | major capsid protein | - |
| C5097_RS12425 () | 2358706..2359038 | - | 333 | WP_001295978.1 | head decoration protein | - |
| C5097_RS12430 () | 2359048..2360367 | - | 1320 | WP_000123305.1 | S49 family peptidase | - |
| C5097_RS12435 () | 2360348..2361949 | - | 1602 | WP_001349919.1 | phage portal protein | - |
| C5097_RS12440 () | 2361946..2362152 | - | 207 | WP_000198149.1 | gpW family protein | - |
| C5097_RS12445 () | 2362149..2364074 | - | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| C5097_RS12450 () | 2364049..2364594 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| C5097_RS12460 () | 2364983..2365216 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| C5097_RS12465 () | 2365274..2365684 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| C5097_RS12470 () | 2365836..2366009 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| C5097_RS12475 () | 2366181..2366336 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| C5097_RS25105 () | 2366415..2366480 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| C5097_RS12480 () | 2366483..2366671 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| C5097_RS12485 () | 2366682..2366894 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| C5097_RS12490 () | 2367257..2367754 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| C5097_RS12495 () | 2367751..2368284 | - | 534 | WP_001092971.1 | lysozyme | - |
| C5097_RS12500 () | 2368281..2368541 | - | 261 | Protein_2244 | YdfR family protein | - |
| C5097_RS12505 () | 2368620..2369045 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| C5097_RS12510 () | 2369042..2369392 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| C5097_RS12515 () | 2369423..2371036 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| C5097_RS12520 () | 2371058..2371132 | - | 75 | Protein_2248 | YdfR family protein | - |
| C5097_RS12525 () | 2371137..2371352 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| C5097_RS25450 () | 2371572..2371742 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| C5097_RS12530 () | 2372106..2372321 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| C5097_RS12535 () | 2372622..2372834 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| C5097_RS25110 () | 2372889..2372978 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| C5097_RS12540 () | 2373256..2374008 | - | 753 | WP_001047135.1 | antitermination protein | - |
| C5097_RS12545 () | 2374022..2375071 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| C5097_RS12550 () | 2375073..2375351 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| C5097_RS12555 () | 2375418..2375669 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| C5097_RS12560 () | 2375886..2376041 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C5097_RS12565 () | 2376113..2376400 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C5097_RS12570 () | 2376400..2376639 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C5097_RS12575 () | 2376664..2376969 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| C5097_RS12580 () | 2377172..2377504 | + | 333 | WP_001301033.1 | protein FlxA | - |
| C5097_RS12590 () | 2377941..2379254 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| C5097_RS25330 () | 2380023..2380310 | - | 288 | Protein_2264 | hypothetical protein | - |
| C5097_RS12605 () | 2380921..2381277 | - | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| C5097_RS12610 () | 2381274..2381375 | - | 102 | Protein_2266 | DUF977 family protein | - |
| C5097_RS12620 () | 2382686..2383009 | - | 324 | Protein_2268 | DUF977 family protein | - |
| C5097_RS12625 () | 2383050..2384015 | - | 966 | WP_122991531.1 | hypothetical protein | - |
| C5097_RS12630 () | 2383996..2384517 | - | 522 | WP_000705358.1 | hypothetical protein | - |
| C5097_RS12635 () | 2384501..2384731 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| C5097_RS12640 () | 2384815..2385222 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| C5097_RS12645 () | 2385389..2385544 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| C5097_RS12655 () | 2385704..2385922 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| C5097_RS12665 () | 2386490..2386678 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| C5097_RS12670 () | 2386675..2386866 | + | 192 | WP_089588188.1 | lysis protein YdfD | - |
| C5097_RS12675 () | 2386959..2389430 | + | 2472 | WP_000048342.1 | exonuclease | - |
| C5097_RS12680 () | 2389503..2389754 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| C5097_RS12685 () | 2389789..2391069 | + | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| C5097_RS12695 () | 2391257..2392276 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| C5097_RS12700 () | 2392288..2393502 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| C5097_RS12705 () | 2393708..2394034 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| C5097_RS12710 () | 2394169..2394510 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| C5097_RS12715 () | 2394545..2395105 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C5097_RS12720 () | 2395108..2395818 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|