MGE detailed information
MGE type: Prophage MGE length: 45914 bp
Accession: NZ_CP027035 Location: 1024133..1070046 Organism: Mycobacterium tuberculosis variant bovis strain 2002/0476 Replicon: chromosome
Accession: NZ_CP027035 Location: 1024133..1070046 Organism: Mycobacterium tuberculosis variant bovis strain 2002/0476 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1D11_RS05020 () | 1020326..1021597 | - | 1272 | WP_003404747.1 | PPE family protein | - |
| C1D11_RS05025 () | 1021612..1021911 | - | 300 | WP_003404748.1 | PE family protein | - |
| C1D11_RS05030 () | 1022355..1024136 | + | 1782 | WP_003404749.1 | BCCT family transporter | - |
| C1D11_RS05035 () | 1024133..1024390 | + | 258 | WP_003404750.1 | hypothetical protein | - |
| C1D11_RS05040 () | 1024479..1024955 | + | 477 | WP_003404754.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1D11_RS05045 () | 1024952..1025452 | + | 501 | WP_003404756.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1D11_RS05055 () | 1025765..1027084 | - | 1320 | WP_010950468.1 | IS256-like element IS1554 family transposase | - |
| C1D11_RS05060 () | 1027372..1027953 | + | 582 | WP_003404760.1 | IS607-like element IS1535 family transposase | - |
| C1D11_RS05065 () | 1027953..1029605 | + | 1653 | WP_003404761.1 | IS607 family element transposase accessory protein TnpB | - |
| C1D11_RS05070 () | 1029781..1030845 | - | 1065 | WP_003898648.1 | poly-gamma-glutamate hydrolase family protein | - |
| C1D11_RS05075 () | 1030846..1032132 | - | 1287 | WP_105577716.1 | Nramp family divalent metal transporter | - |
| C1D11_RS05080 () | 1032164..1032901 | - | 738 | WP_003404764.1 | flavodoxin family protein | - |
| C1D11_RS05085 () | 1032978..1034054 | - | 1077 | WP_003404767.1 | hypothetical protein | - |
| C1D11_RS05090 () | 1034108..1034899 | - | 792 | WP_003404769.1 | SDR family oxidoreductase | - |
| C1D11_RS05095 () | 1035171..1036283 | + | 1113 | WP_003404775.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| C1D11_RS05100 () | 1036296..1037270 | + | 975 | WP_003404779.1 | phosphate ABC transporter permease subunit PstC | - |
| C1D11_RS05105 () | 1037267..1038181 | + | 915 | WP_003898651.1 | phosphate ABC transporter permease PstA | - |
| C1D11_RS21475 () | 1038188..1040183 | - | 1996 | Protein_964 | serine/threonine protein kinase PknD | - |
| C1D11_RS05120 () | 1040205..1041317 | - | 1113 | WP_003404784.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| C1D11_RS05130 () | 1041533..1042364 | + | 832 | Protein_966 | phosphate ABC transporter ATP-binding protein | - |
| C1D11_RS05135 () | 1042385..1043509 | + | 1125 | WP_003404786.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| C1D11_RS05140 () | 1043569..1044585 | + | 1017 | WP_003404792.1 | phosphate ABC transporter permease subunit PstC | - |
| C1D11_RS05145 () | 1044587..1045492 | + | 906 | WP_003404794.1 | phosphate ABC transporter permease PstA | - |
| C1D11_RS05150 () | 1045469..1046290 | - | 822 | WP_003404795.1 | Ku protein | - |
| C1D11_RS05155 () | 1046406..1048685 | + | 2280 | WP_003898655.1 | ATP-dependent DNA ligase | - |
| C1D11_RS05160 () | 1048682..1050616 | + | 1935 | WP_003404801.1 | fumarylacetoacetate hydrolase family protein | - |
| C1D11_RS05165 () | 1050863..1051729 | - | 867 | WP_003404819.1 | TIGR03619 family F420-dependent LLM class oxidoreductase | - |
| C1D11_RS05170 () | 1051814..1052587 | - | 774 | WP_003404823.1 | STAS domain-containing protein | - |
| C1D11_RS05175 () | 1052630..1052908 | + | 279 | WP_003901948.1 | hypothetical protein | - |
| C1D11_RS05180 () | 1052966..1054006 | - | 1041 | WP_003898656.1 | DUF4873 domain-containing protein | - |
| C1D11_RS05185 () | 1054035..1054511 | + | 477 | WP_003404828.1 | Fpg/Nei family DNA glycosylase | - |
| C1D11_RS05190 () | 1054517..1055278 | + | 762 | WP_003404829.1 | SDR family oxidoreductase | - |
| C1D11_RS05195 () | 1055294..1056955 | - | 1662 | WP_003404830.1 | glucose-6-phosphate isomerase | - |
| C1D11_RS05210 () | 1057717..1057911 | + | 195 | WP_003404835.1 | hypothetical protein | - |
| C1D11_RS05215 () | 1057916..1058233 | - | 318 | WP_003404838.1 | chorismate mutase | - |
| C1D11_RS05220 () | 1058530..1060845 | + | 2316 | WP_003404859.1 | DNA helicase PcrA | - |
| C1D11_RS05225 () | 1060926..1061924 | - | 999 | WP_003404862.1 | M23 family metallopeptidase | - |
| C1D11_RS05230 () | 1062234..1063397 | + | 1164 | WP_003404866.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| C1D11_RS05235 () | 1063419..1064321 | + | 903 | WP_003404870.1 | succinate--CoA ligase subunit alpha | - |
| C1D11_RS05240 () | 1064384..1065232 | - | 849 | WP_003404873.1 | LLM class F420-dependent oxidoreductase | - |
| C1D11_RS05250 () | 1065397..1066308 | + | 912 | WP_003404875.1 | DUF5336 domain-containing protein | - |
| C1D11_RS05255 () | 1066348..1067715 | + | 1368 | WP_003901049.1 | hypothetical protein | - |
| C1D11_RS05260 () | 1067831..1068478 | + | 648 | WP_003898661.1 | phosphoribosylglycinamide formyltransferase | - |
| C1D11_RS05265 () | 1068475..1070046 | + | 1572 | WP_003404890.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| C1D11_RS05270 () | 1070153..1071532 | + | 1380 | WP_003404892.1 | sigma 54-interacting transcriptional regulator | - |
| C1D11_RS05275 () | 1071525..1073543 | + | 2019 | WP_003404895.1 | VWA domain-containing protein | - |
| C1D11_RS05280 () | 1073597..1073818 | + | 222 | WP_003404898.1 | antitoxin VapB9 | - |
| C1D11_RS05285 () | 1073815..1074198 | + | 384 | WP_003404903.1 | PIN domain-containing protein | - |
| C1D11_RS05290 () | 1074344..1074691 | + | 348 | WP_003404907.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|