MGE detailed information
MGE type: Genomic_island MGE length: 25531 bp
Accession: NZ_CP026985 Location: 1450273..1475803 Organism: Pectobacterium parmentieri strain IFB5619 Replicon: chromosome
Accession: NZ_CP026985 Location: 1450273..1475803 Organism: Pectobacterium parmentieri strain IFB5619 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5E25_RS06840 () | 1445811..1446758 | + | 948 | WP_014699058.1 | omptin family outer membrane protease | - |
| C5E25_RS06845 () | 1446872..1447237 | + | 366 | WP_014699059.1 | DUF4751 family protein | - |
| C5E25_RS06850 () | 1447335..1448366 | - | 1032 | WP_014699060.1 | methionine synthase | - |
| C5E25_RS06855 () | 1448394..1449371 | - | 978 | WP_014699061.1 | DUF1852 domain-containing protein | - |
| C5E25_RS06860 () | 1449851..1450093 | - | 243 | WP_103808481.1 | GIY-YIG nuclease family protein | - |
| C5E25_RS06865 () | 1450240..1450698 | + | 459 | WP_071822844.1 | NUDIX domain-containing protein | - |
| C5E25_RS06870 () | 1450771..1451340 | + | 570 | WP_014699063.1 | TetR family transcriptional regulator | - |
| C5E25_RS06875 () | 1451403..1451873 | + | 471 | Protein_1318 | nuclear transport factor 2 family protein | - |
| C5E25_RS06880 () | 1451963..1452382 | - | 420 | WP_081439987.1 | IS3 family transposase ISStau1 | Transposase |
| C5E25_RS06885 () | 1452542..1452832 | - | 291 | WP_014699065.1 | IS3 family transposase ISHar2 | Transposase |
| C5E25_RS06890 () | 1452898..1453227 | + | 330 | Protein_1321 | IS30 family transposase | - |
| C5E25_RS06895 () | 1453401..1454030 | - | 630 | WP_103808445.1 | hypothetical protein | - |
| C5E25_RS06900 () | 1454461..1455675 | - | 1215 | WP_103808444.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C5E25_RS06905 () | 1456388..1457221 | - | 834 | WP_103808443.1 | DUF4942 domain-containing protein | - |
| C5E25_RS06910 () | 1457339..1457659 | - | 321 | WP_103808442.1 | TA system toxin CbtA family protein | Toxin Detail |
| C5E25_RS06915 () | 1457729..1458064 | - | 336 | WP_103808441.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C5E25_RS06920 () | 1458101..1458574 | - | 474 | WP_121247002.1 | DNA repair protein RadC | - |
| C5E25_RS06925 () | 1458659..1458892 | - | 234 | WP_040034648.1 | membrane protein | - |
| C5E25_RS06930 () | 1458910..1459383 | - | 474 | WP_103808732.1 | hypothetical protein | - |
| C5E25_RS06935 () | 1459419..1459988 | - | 570 | Protein_1330 | hypothetical protein | - |
| C5E25_RS06940 () | 1460170..1460868 | - | 699 | WP_121247005.1 | DeoR family transcriptional regulator | - |
| C5E25_RS06945 () | 1461238..1462113 | - | 876 | WP_103808734.1 | GTPase family protein | - |
| C5E25_RS06950 () | 1462202..1463119 | - | 918 | WP_103808735.1 | hypothetical protein | - |
| C5E25_RS06955 () | 1463622..1463834 | + | 213 | WP_103808736.1 | AlpA family phage regulatory protein | - |
| C5E25_RS06960 () | 1463940..1464473 | + | 534 | WP_103808737.1 | secretoglobin family protein | - |
| C5E25_RS06965 () | 1464483..1464861 | + | 379 | Protein_1336 | hypothetical protein | - |
| C5E25_RS06970 () | 1465246..1465857 | + | 612 | WP_103808745.1 | inovirus Gp2 family protein | - |
| C5E25_RS06975 () | 1466238..1468127 | + | 1890 | WP_103808738.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| C5E25_RS06980 () | 1468350..1468886 | + | 537 | WP_103808739.1 | hypothetical protein | - |
| C5E25_RS06985 () | 1468896..1470578 | + | 1683 | WP_103808740.1 | hypothetical protein | - |
| C5E25_RS06990 () | 1471313..1471819 | - | 507 | WP_103808741.1 | hypothetical protein | - |
| C5E25_RS06995 () | 1471806..1472690 | - | 885 | WP_103808742.1 | hypothetical protein | - |
| C5E25_RS07000 () | 1473137..1475803 | - | 2667 | WP_146052179.1 | hypothetical protein | - |
| C5E25_RS07005 () | 1476311..1477525 | - | 1215 | WP_121247008.1 | tyrosine-type recombinase/integrase | - |
| C5E25_RS07015 () | 1478212..1480665 | + | 2454 | WP_103808086.1 | mechanosensitive ion channel family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|