MGE detailed information
MGE type: Genomic_island MGE length: 25530 bp
Accession: NZ_CP026983 Location: 1446805..1472334 Organism: Pectobacterium parmentieri strain IFB5604 Replicon: chromosome
Accession: NZ_CP026983 Location: 1446805..1472334 Organism: Pectobacterium parmentieri strain IFB5604 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5E23_RS06815 () | 1442343..1443290 | + | 948 | WP_014699058.1 | omptin family outer membrane protease | - |
| C5E23_RS06820 () | 1443404..1443769 | + | 366 | WP_014699059.1 | DUF4751 family protein | - |
| C5E23_RS06825 () | 1443867..1444898 | - | 1032 | WP_014699060.1 | methionine synthase | - |
| C5E23_RS06830 () | 1444926..1445903 | - | 978 | WP_014699061.1 | DUF1852 domain-containing protein | - |
| C5E23_RS06835 () | 1446383..1446625 | - | 243 | WP_103808481.1 | GIY-YIG nuclease family protein | - |
| C5E23_RS06840 () | 1446772..1447230 | + | 459 | WP_071822844.1 | NUDIX domain-containing protein | - |
| C5E23_RS06845 () | 1447303..1447872 | + | 570 | WP_014699063.1 | TetR family transcriptional regulator | - |
| C5E23_RS06850 () | 1447935..1448405 | + | 471 | Protein_1310 | nuclear transport factor 2 family protein | - |
| C5E23_RS06855 () | 1448495..1448914 | - | 420 | WP_081439987.1 | IS3 family transposase ISStau1 | Transposase |
| C5E23_RS06860 () | 1449074..1449364 | - | 291 | WP_014699065.1 | IS3 family transposase ISHar2 | Transposase |
| C5E23_RS06865 () | 1449430..1449759 | + | 330 | Protein_1313 | IS30 family transposase | - |
| C5E23_RS06870 () | 1449933..1450562 | - | 630 | WP_103808445.1 | hypothetical protein | - |
| C5E23_RS06875 () | 1450993..1452207 | - | 1215 | WP_103808444.1 | Prophage integrase IntS ; Integrase | Integrase |
| C5E23_RS06880 () | 1452920..1453753 | - | 834 | WP_103808443.1 | DUF4942 domain-containing protein | - |
| C5E23_RS06885 () | 1453871..1454191 | - | 321 | WP_103808442.1 | TA system toxin CbtA family protein | Toxin Detail |
| C5E23_RS06890 () | 1454261..1454596 | - | 336 | WP_103808441.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C5E23_RS06895 () | 1454633..1455106 | - | 474 | WP_121301511.1 | DNA repair protein RadC | - |
| C5E23_RS06900 () | 1455190..1455423 | - | 234 | WP_103808798.1 | hypothetical protein | - |
| C5E23_RS06905 () | 1455441..1455914 | - | 474 | WP_103808799.1 | hypothetical protein | - |
| C5E23_RS06910 () | 1455950..1456519 | - | 570 | Protein_1322 | hypothetical protein | - |
| C5E23_RS06915 () | 1456701..1457399 | - | 699 | WP_121247005.1 | DeoR family transcriptional regulator | - |
| C5E23_RS06920 () | 1457769..1458644 | - | 876 | WP_103808734.1 | GTPase family protein | - |
| C5E23_RS06925 () | 1458733..1459650 | - | 918 | WP_103808735.1 | hypothetical protein | - |
| C5E23_RS06930 () | 1460153..1460365 | + | 213 | WP_103808736.1 | AlpA family phage regulatory protein | - |
| C5E23_RS06935 () | 1460471..1461004 | + | 534 | WP_103808737.1 | secretoglobin family protein | - |
| C5E23_RS06940 () | 1461014..1461392 | + | 379 | Protein_1328 | hypothetical protein | - |
| C5E23_RS06945 () | 1461777..1462388 | + | 612 | WP_103808745.1 | inovirus Gp2 family protein | - |
| C5E23_RS06950 () | 1462769..1464658 | + | 1890 | WP_103808738.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| C5E23_RS06955 () | 1464881..1465417 | + | 537 | WP_103808739.1 | hypothetical protein | - |
| C5E23_RS06960 () | 1465427..1467109 | + | 1683 | WP_103808740.1 | hypothetical protein | - |
| C5E23_RS06965 () | 1467844..1468350 | - | 507 | WP_103808741.1 | hypothetical protein | - |
| C5E23_RS06970 () | 1468337..1469221 | - | 885 | WP_103808742.1 | hypothetical protein | - |
| C5E23_RS06975 () | 1469668..1472334 | - | 2667 | WP_146052179.1 | hypothetical protein | - |
| C5E23_RS06980 () | 1472842..1474056 | - | 1215 | WP_121247008.1 | tyrosine-type recombinase/integrase | - |
| C5E23_RS06990 () | 1474743..1477196 | + | 2454 | WP_103808086.1 | mechanosensitive ion channel family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|