MGE detailed information
MGE type: Prophage MGE length: 17007 bp
Accession: NZ_CP026982 Location: 4352170..4369176 Organism: Pectobacterium parmentieri strain IFB5486 Replicon: chromosome
Accession: NZ_CP026982 Location: 4352170..4369176 Organism: Pectobacterium parmentieri strain IFB5486 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5E22_RS20270 () | 4347498..4350746 | - | 3249 | WP_033070789.1 | type I restriction endonuclease subunit R | - |
| C5E22_RS20275 () | 4350743..4352170 | - | 1428 | WP_033070788.1 | restriction endonuclease subunit S | - |
| C5E22_RS20280 () | 4352170..4354533 | - | 2364 | WP_033070787.1 | type I restriction-modification system subunit M | - |
| C5E22_RS20285 () | 4354881..4356143 | - | 1263 | WP_033070786.1 | Prophage integrase IntA ; Integrase | Integrase |
| C5E22_RS20290 () | 4356685..4356897 | + | 213 | WP_082218588.1 | DUF1133 family protein | - |
| C5E22_RS20295 () | 4356959..4357783 | + | 825 | WP_127087856.1 | hypothetical protein | - |
| C5E22_RS20300 () | 4357770..4358891 | + | 1122 | WP_033070785.1 | XRE family transcriptional regulator | - |
| C5E22_RS20305 () | 4359060..4359635 | - | 576 | WP_033070784.1 | PIN domain-containing protein | Toxin Detail |
| C5E22_RS20310 () | 4359635..4360096 | - | 462 | WP_033070783.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| C5E22_RS20315 () | 4360401..4360619 | + | 219 | Protein_3898 | hypothetical protein | - |
| C5E22_RS20325 () | 4360788..4360862 | - | 75 | Protein_3899 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C5E22_RS23860 () | 4361077..4361328 | + | 252 | WP_127087855.1 | hypothetical protein | - |
| C5E22_RS20330 () | 4361875..4362753 | + | 879 | WP_033070781.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C5E22_RS20335 () | 4362756..4362956 | + | 201 | WP_014698606.1 | AlpA family transcriptional regulator | - |
| C5E22_RS20340 () | 4362953..4363489 | + | 537 | WP_033070780.1 | ash family protein | - |
| C5E22_RS20345 () | 4363482..4365518 | + | 2037 | WP_033070779.1 | AAA family ATPase | - |
| C5E22_RS20350 () | 4365805..4366125 | + | 321 | WP_005971241.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C5E22_RS20355 () | 4366115..4366399 | + | 285 | WP_005971242.1 | helix-turn-helix domain-containing protein | - |
| C5E22_RS20365 () | 4366608..4367839 | - | 1232 | Protein_3907 | hypothetical protein | - |
| C5E22_RS20370 () | 4367923..4369176 | - | 1254 | WP_033070776.1 | Prophage integrase IntA ; Integrase | Integrase |
| C5E22_RS20380 () | 4369698..4370774 | - | 1077 | WP_012822226.1 | LPS export ABC transporter permease LptG | - |
| C5E22_RS20385 () | 4370774..4371886 | - | 1113 | WP_033070775.1 | LPS export ABC transporter permease LptF | - |
| C5E22_RS20390 () | 4372168..4373679 | + | 1512 | WP_010284628.1 | leucyl aminopeptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|