MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 7951 bp
Accession: NZ_CP026982 Location: 1149420..1157370 Organism: Pectobacterium parmentieri strain IFB5486 Replicon: chromosome
Accession: NZ_CP026982 Location: 1149420..1157370 Organism: Pectobacterium parmentieri strain IFB5486 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5E22_RS05130 () | 1144656..1146722 | - | 2067 | WP_033071878.1 | multicopper oxidase domain-containing protein | - |
| C5E22_RS05140 () | 1147641..1148855 | + | 1215 | WP_033071877.1 | tyrosine-type recombinase/integrase | - |
| C5E22_RS05145 () | 1148976..1149197 | - | 222 | Protein_986 | integrase | - |
| C5E22_RS05150 () | 1150233..1151564 | + | 1332 | WP_033071876.1 | hypothetical protein | - |
| C5E22_RS05155 () | 1151566..1152144 | + | 579 | WP_033071875.1 | hypothetical protein | - |
| C5E22_RS05160 () | 1152242..1152779 | - | 538 | Protein_989 | exonuclease SbcC | - |
| C5E22_RS05165 () | 1152885..1153190 | - | 306 | WP_033071873.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C5E22_RS05170 () | 1153193..1153411 | - | 219 | WP_015855076.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C5E22_RS05175 () | 1153470..1154213 | - | 744 | WP_033071872.1 | hypothetical protein | - |
| C5E22_RS23720 () | 1154355..1154525 | + | 171 | WP_154665134.1 | hypothetical protein | - |
| C5E22_RS05185 () | 1155117..1155458 | - | 342 | WP_033071870.1 | hypothetical protein | - |
| C5E22_RS05190 () | 1155644..1155838 | + | 195 | WP_033071869.1 | DUF3950 domain-containing protein | - |
| C5E22_RS05195 () | 1155944..1157203 | - | 1260 | WP_069704166.1 | Prophage integrase IntS ; Integrase | Integrase |
| C5E22_RS05205 () | 1158119..1160272 | + | 2154 | WP_033071867.1 | ornithine decarboxylase | - |
| C5E22_RS05210 () | 1160364..1161815 | - | 1452 | WP_033071866.1 | L-asparagine permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|