MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 7745 bp
Accession: NZ_CP026980 Location: 3746209..3753953 Organism: Pectobacterium parmentieri strain IFB5441 Replicon: chromosome
Accession: NZ_CP026980 Location: 3746209..3753953 Organism: Pectobacterium parmentieri strain IFB5441 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5E20_RS24265 () | 3741267..3741857 | + | 591 | WP_198339833.1 | hypothetical protein | - |
| C5E20_RS17695 () | 3741841..3742794 | + | 954 | WP_198339834.1 | DUF4868 domain-containing protein | - |
| C5E20_RS17700 () | 3742934..3744655 | - | 1722 | WP_121265914.1 | DUF87 domain-containing protein | - |
| C5E20_RS17705 () | 3744666..3745679 | - | 1014 | WP_121265916.1 | SIR2 family protein | - |
| C5E20_RS17710 () | 3746391..3747650 | + | 1260 | WP_121265918.1 | Prophage integrase IntS ; Integrase | Integrase |
| C5E20_RS17715 () | 3747757..3747951 | - | 195 | WP_039525031.1 | DUF3950 domain-containing protein | - |
| C5E20_RS17720 () | 3748137..3748478 | + | 342 | WP_025919584.1 | hypothetical protein | - |
| C5E20_RS24155 () | 3749071..3749241 | - | 171 | WP_162939939.1 | hypothetical protein | - |
| C5E20_RS17730 () | 3749383..3750126 | + | 744 | WP_121265922.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| C5E20_RS17735 () | 3750185..3750403 | + | 219 | WP_015855076.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C5E20_RS17740 () | 3750406..3750711 | + | 306 | WP_121265924.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C5E20_RS17745 () | 3751040..3751426 | + | 387 | WP_121265926.1 | hypothetical protein | - |
| C5E20_RS17750 () | 3751419..3751640 | + | 222 | WP_121268934.1 | hypothetical protein | - |
| C5E20_RS17755 () | 3751902..3752396 | - | 495 | WP_121265928.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C5E20_RS17760 () | 3752393..3752686 | - | 294 | WP_121265930.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C5E20_RS17765 () | 3752874..3753560 | - | 687 | WP_121265932.1 | DNA primase | - |
| C5E20_RS17770 () | 3754123..3755352 | + | 1230 | WP_121265934.1 | tyrosine-type recombinase/integrase | - |
| C5E20_RS17775 () | 3755386..3755649 | + | 264 | WP_121265936.1 | XRE family transcriptional regulator | - |
| C5E20_RS17780 () | 3755649..3755881 | + | 233 | Protein_3411 | hypothetical protein | - |
| C5E20_RS17785 () | 3756056..3758026 | + | 1971 | WP_121265938.1 | acyltransferase | - |
| C5E20_RS17790 () | 3758192..3758485 | - | 294 | Protein_3413 | IS3 family transposase | - |
| C5E20_RS17795 () | 3758485..3758589 | + | 105 | Protein_3414 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|