MGE detailed information
MGE type: Prophage MGE length: 40728 bp
Accession: NZ_CP026979 Location: 3352045..3392772 Organism: Pectobacterium parmentieri strain IFB5432 Replicon: chromosome
Accession: NZ_CP026979 Location: 3352045..3392772 Organism: Pectobacterium parmentieri strain IFB5432 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5E19_RS15725 () | 3347658..3348644 | - | 987 | WP_121265739.1 | GTPase | - |
| C5E19_RS15730 () | 3348661..3348864 | - | 204 | WP_005976130.1 | YbdD/YjiX family protein | - |
| C5E19_RS15735 () | 3349010..3351163 | - | 2154 | WP_015730958.1 | carbon starvation protein A | - |
| C5E19_RS15740 () | 3351456..3351680 | - | 225 | WP_205577248.1 | hypothetical protein | - |
| C5E19_RS15750 () | 3352063..3352389 | + | 327 | WP_121266691.1 | DinI family protein | - |
| C5E19_RS15755 () | 3352346..3352927 | - | 582 | WP_121265743.1 | hypothetical protein | - |
| C5E19_RS15760 () | 3352937..3355003 | - | 2067 | WP_121265745.1 | tail fiber protein | - |
| C5E19_RS15765 () | 3355069..3357015 | - | 1947 | WP_121265747.1 | hypothetical protein | - |
| C5E19_RS15770 () | 3357018..3357767 | - | 750 | WP_121266693.1 | DUF2612 domain-containing protein | - |
| C5E19_RS15775 () | 3357993..3358793 | - | 801 | WP_162940851.1 | hypothetical protein | - |
| C5E19_RS15780 () | 3358844..3360040 | - | 1197 | WP_121265751.1 | baseplate J/gp47 family protein | - |
| C5E19_RS15785 () | 3360033..3360383 | - | 351 | WP_121265753.1 | hypothetical protein | - |
| C5E19_RS15790 () | 3360392..3361072 | - | 681 | WP_121265756.1 | hypothetical protein | - |
| C5E19_RS15795 () | 3361051..3361896 | - | 846 | WP_121265758.1 | hypothetical protein | - |
| C5E19_RS15800 () | 3361893..3362195 | - | 303 | WP_121265760.1 | hypothetical protein | - |
| C5E19_RS15805 () | 3362192..3362722 | - | 531 | WP_121265762.1 | hypothetical protein | - |
| C5E19_RS15810 () | 3362719..3364272 | - | 1554 | WP_121265764.1 | hypothetical protein | - |
| C5E19_RS15815 () | 3364376..3364810 | - | 435 | WP_121265766.1 | hypothetical protein | - |
| C5E19_RS15820 () | 3364810..3365253 | - | 444 | WP_121265768.1 | hypothetical protein | - |
| C5E19_RS15825 () | 3365267..3366760 | - | 1494 | WP_121265770.1 | DUF3383 domain-containing protein | - |
| C5E19_RS15830 () | 3366774..3367316 | - | 543 | WP_121265772.1 | hypothetical protein | - |
| C5E19_RS15835 () | 3367313..3367678 | - | 366 | WP_121265774.1 | hypothetical protein | - |
| C5E19_RS15840 () | 3367675..3368178 | - | 504 | WP_121265776.1 | hypothetical protein | - |
| C5E19_RS15845 () | 3368178..3368615 | - | 438 | WP_121265778.1 | DUF4054 domain-containing protein | - |
| C5E19_RS15850 () | 3368625..3368993 | - | 369 | WP_121265780.1 | hypothetical protein | - |
| C5E19_RS15855 () | 3369050..3370189 | - | 1140 | WP_121265782.1 | DUF2184 domain-containing protein | - |
| C5E19_RS15860 () | 3370202..3370699 | - | 498 | WP_121265784.1 | hypothetical protein | - |
| C5E19_RS15865 () | 3370699..3371889 | - | 1191 | WP_121265786.1 | DUF2213 domain-containing protein | - |
| C5E19_RS15870 () | 3371886..3372761 | - | 876 | WP_121265788.1 | head morphogenesis protein | - |
| C5E19_RS15875 () | 3372709..3374253 | - | 1545 | WP_121265790.1 | DUF1073 domain-containing protein | - |
| C5E19_RS15880 () | 3374258..3375865 | - | 1608 | WP_121265792.1 | terminase large subunit | - |
| C5E19_RS15885 () | 3376085..3376558 | - | 474 | WP_121265794.1 | DUF2280 domain-containing protein | - |
| C5E19_RS15890 () | 3376589..3377227 | - | 639 | WP_121265796.1 | hypothetical protein | - |
| C5E19_RS15895 () | 3377344..3377589 | - | 246 | WP_121265798.1 | hypothetical protein | - |
| C5E19_RS15900 () | 3377682..3378227 | - | 546 | WP_205577247.1 | hypothetical protein | - |
| C5E19_RS15905 () | 3378230..3378670 | - | 441 | WP_121265802.1 | lysozyme | - |
| C5E19_RS15910 () | 3378654..3378995 | - | 342 | WP_121265804.1 | phage holin, lambda family | - |
| C5E19_RS15915 () | 3379093..3379500 | - | 408 | WP_121265806.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| C5E19_RS15920 () | 3379549..3379725 | - | 177 | WP_072014142.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C5E19_RS15925 () | 3379786..3380511 | - | 726 | WP_121265808.1 | protein mom | - |
| C5E19_RS15930 () | 3380745..3381149 | - | 405 | WP_121265810.1 | antitermination protein | - |
| C5E19_RS15935 () | 3381149..3382006 | - | 858 | WP_121265812.1 | helix-turn-helix domain-containing protein | - |
| C5E19_RS15940 () | 3381996..3383387 | - | 1392 | WP_121265814.1 | replicative DNA helicase | - |
| C5E19_RS15945 () | 3383384..3384253 | - | 870 | WP_121265816.1 | ATP-binding protein | - |
| C5E19_RS15950 () | 3384250..3385173 | - | 924 | WP_121265818.1 | hypothetical protein | - |
| C5E19_RS15960 () | 3385466..3386332 | - | 867 | WP_121265822.1 | ORF6N domain-containing protein | - |
| C5E19_RS23770 () | 3386329..3386613 | - | 285 | WP_162940852.1 | hypothetical protein | - |
| C5E19_RS15965 () | 3386615..3386848 | - | 234 | WP_121265824.1 | helix-turn-helix domain-containing protein | - |
| C5E19_RS15970 () | 3386981..3387667 | + | 687 | WP_121265826.1 | helix-turn-helix transcriptional regulator | - |
| C5E19_RS15975 () | 3387830..3388135 | + | 306 | WP_121265828.1 | hypothetical protein | - |
| C5E19_RS15980 () | 3388140..3388406 | + | 267 | WP_121265830.1 | hypothetical protein | - |
| C5E19_RS15985 () | 3388393..3388764 | + | 372 | WP_121265832.1 | S24/S26 family peptidase | - |
| C5E19_RS15990 () | 3388852..3389232 | + | 381 | WP_162940853.1 | hypothetical protein | - |
| C5E19_RS15995 () | 3389225..3389497 | + | 273 | WP_121265836.1 | hypothetical protein | - |
| C5E19_RS23775 () | 3389490..3389663 | + | 174 | WP_162940854.1 | hypothetical protein | - |
| C5E19_RS16000 () | 3389653..3389853 | + | 201 | WP_121265838.1 | hypothetical protein | - |
| C5E19_RS16005 () | 3389846..3390079 | + | 234 | WP_121265840.1 | hypothetical protein | - |
| C5E19_RS16010 () | 3390069..3390575 | + | 507 | WP_121265842.1 | hypothetical protein | - |
| C5E19_RS16015 () | 3390624..3391040 | + | 417 | WP_121266695.1 | hypothetical protein | - |
| C5E19_RS16020 () | 3391024..3391425 | + | 402 | WP_121265844.1 | hypothetical protein | - |
| C5E19_RS16025 () | 3391422..3391664 | + | 243 | WP_121265846.1 | excisionase | - |
| C5E19_RS16030 () | 3391648..3392772 | + | 1125 | WP_121265848.1 | hypothetical protein ; Integrase | Integrase |
| C5E19_RS16035 () | 3392888..3394537 | - | 1650 | WP_014700805.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| C5E19_RS16040 () | 3395207..3396892 | + | 1686 | WP_015730960.1 | Kef family K(+) transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|