MGE detailed information
MGE type: Prophage MGE length: 17007 bp
Accession: NZ_CP026977 Location: 505530..522536 Organism: Pectobacterium parmentieri strain IFB5408 Replicon: chromosome
Accession: NZ_CP026977 Location: 505530..522536 Organism: Pectobacterium parmentieri strain IFB5408 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5E17_RS02395 () | 501027..502538 | - | 1512 | WP_010284628.1 | leucyl aminopeptidase | - |
| C5E17_RS02400 () | 502820..503932 | + | 1113 | WP_033070775.1 | LPS export ABC transporter permease LptF | - |
| C5E17_RS02405 () | 503932..505008 | + | 1077 | WP_012822226.1 | LPS export ABC transporter permease LptG | - |
| C5E17_RS02415 () | 505530..506783 | + | 1254 | WP_033070776.1 | tyrosine-type recombinase/integrase | - |
| C5E17_RS02420 () | 506867..508098 | + | 1232 | Protein_460 | hypothetical protein | - |
| C5E17_RS02430 () | 508307..508591 | - | 285 | WP_005971242.1 | helix-turn-helix domain-containing protein | - |
| C5E17_RS02435 () | 508581..508901 | - | 321 | WP_005971241.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C5E17_RS02440 () | 509188..511224 | - | 2037 | WP_033070779.1 | AAA family ATPase | - |
| C5E17_RS02445 () | 511217..511753 | - | 537 | WP_033070780.1 | ash family protein | - |
| C5E17_RS02450 () | 511750..511950 | - | 201 | WP_014698606.1 | AlpA family transcriptional regulator | - |
| C5E17_RS02455 () | 511953..512831 | - | 879 | WP_033070781.1 | integrase domain-containing protein | - |
| C5E17_RS23590 () | 513378..513629 | - | 252 | WP_127087855.1 | hypothetical protein | - |
| C5E17_RS02460 () | 513844..513918 | + | 75 | Protein_468 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C5E17_RS02470 () | 514087..514305 | - | 219 | Protein_469 | hypothetical protein | - |
| C5E17_RS02475 () | 514610..515071 | + | 462 | WP_033070783.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| C5E17_RS02480 () | 515071..515646 | + | 576 | WP_033070784.1 | PIN domain-containing protein | Toxin Detail |
| C5E17_RS02485 () | 515815..516936 | - | 1122 | WP_033070785.1 | XRE family transcriptional regulator | - |
| C5E17_RS02490 () | 516923..517747 | - | 825 | WP_127087856.1 | hypothetical protein | - |
| C5E17_RS02495 () | 517809..518021 | - | 213 | WP_082218588.1 | DUF1133 family protein | - |
| C5E17_RS02500 () | 518563..519825 | + | 1263 | WP_033070786.1 | integrase arm-type DNA-binding domain-containing protein | - |
| C5E17_RS02505 () | 520173..522536 | + | 2364 | WP_033070787.1 | type I restriction-modification system subunit M | - |
| C5E17_RS02510 () | 522536..523963 | + | 1428 | WP_033070788.1 | restriction endonuclease subunit S | - |
| C5E17_RS02515 () | 523960..527208 | + | 3249 | WP_033070789.1 | type I restriction endonuclease subunit R | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|