MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 7951 bp
Accession: NZ_CP026977 Location: 3689426..3697376 Organism: Pectobacterium parmentieri strain IFB5408 Replicon: chromosome
Accession: NZ_CP026977 Location: 3689426..3697376 Organism: Pectobacterium parmentieri strain IFB5408 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5E17_RS17315 () | 3684981..3686432 | + | 1452 | WP_033071866.1 | L-asparagine permease | - |
| C5E17_RS17320 () | 3686524..3688677 | - | 2154 | WP_033071867.1 | ornithine decarboxylase | - |
| C5E17_RS17330 () | 3689593..3690852 | + | 1260 | WP_069704166.1 | integrase arm-type DNA-binding domain-containing protein | - |
| C5E17_RS17335 () | 3690958..3691152 | - | 195 | WP_033071869.1 | DUF3950 domain-containing protein | - |
| C5E17_RS17340 () | 3691338..3691679 | + | 342 | WP_033071870.1 | hypothetical protein | - |
| C5E17_RS23720 () | 3692271..3692441 | - | 171 | WP_154665134.1 | hypothetical protein | - |
| C5E17_RS17350 () | 3692583..3693326 | + | 744 | WP_033071872.1 | hypothetical protein | - |
| C5E17_RS17355 () | 3693385..3693603 | + | 219 | WP_015855076.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C5E17_RS17360 () | 3693606..3693911 | + | 306 | WP_033071873.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C5E17_RS17365 () | 3694017..3694554 | + | 538 | Protein_3326 | exonuclease SbcC | - |
| C5E17_RS17370 () | 3694652..3695230 | - | 579 | WP_033071875.1 | hypothetical protein | - |
| C5E17_RS17375 () | 3695232..3696563 | - | 1332 | WP_033071876.1 | hypothetical protein | - |
| C5E17_RS17380 () | 3697599..3697820 | + | 222 | Protein_3329 | integrase | - |
| C5E17_RS17385 () | 3697941..3699155 | - | 1215 | WP_033071877.1 | tyrosine-type recombinase/integrase | - |
| C5E17_RS17395 () | 3700074..3702140 | + | 2067 | WP_033071878.1 | multicopper oxidase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|