MGE detailed information
MGE type: Prophage MGE length: 24748 bp
Accession: NZ_CP026935 Location: 2496330..2521077 Organism: Escherichia coli strain CFS3292 Replicon: chromosome
Accession: NZ_CP026935 Location: 2496330..2521077 Organism: Escherichia coli strain CFS3292 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5F72_RS12105 () | 2491817..2492158 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| C5F72_RS12110 () | 2492293..2492619 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| C5F72_RS12115 () | 2492825..2494039 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| C5F72_RS12120 () | 2494051..2494605 | + | 555 | Protein_2374 | Zn-dependent oxidoreductase | - |
| C5F72_RS12125 () | 2494696..2495667 | + | 972 | WP_170386723.1 | IS30-like element ISApl1 family transposase | - |
| C5F72_RS12130 () | 2495687..2496142 | + | 456 | WP_032150768.1 | zinc-binding dehydrogenase | - |
| C5F72_RS12135 () | 2496200..2496310 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| C5F72_RS12140 () | 2496330..2497610 | - | 1281 | WP_000876958.1 | site-specific integrase | - |
| C5F72_RS12145 () | 2497645..2497896 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| C5F72_RS12150 () | 2497969..2499951 | - | 1983 | Protein_2380 | 3'-5' exoribonuclease | - |
| C5F72_RS12155 () | 2499941..2500192 | + | 252 | Protein_2381 | DUF977 family protein | - |
| C5F72_RS12160 () | 2500189..2500545 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| C5F72_RS27435 () | 2501156..2501443 | + | 288 | Protein_2383 | hypothetical protein | - |
| C5F72_RS12165 () | 2502212..2503525 | + | 1314 | WP_000589005.1 | ISNCY family transposase | - |
| C5F72_RS12170 () | 2503962..2504294 | - | 333 | WP_001301033.1 | protein FlxA | - |
| C5F72_RS12175 () | 2504497..2504802 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| C5F72_RS12180 () | 2504827..2505066 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C5F72_RS12185 () | 2505066..2505353 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C5F72_RS12190 () | 2505425..2505580 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C5F72_RS12195 () | 2505797..2506048 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| C5F72_RS12200 () | 2506115..2506393 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| C5F72_RS12205 () | 2506395..2507444 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| C5F72_RS12210 () | 2507458..2508210 | + | 753 | WP_061093371.1 | antitermination protein | - |
| C5F72_RS12215 () | 2508488..2508577 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| C5F72_RS12220 () | 2508632..2508844 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| C5F72_RS12225 () | 2509145..2509360 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| C5F72_RS12230 () | 2510114..2510329 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| C5F72_RS12235 () | 2510334..2510645 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| C5F72_RS12240 () | 2510642..2511175 | + | 534 | WP_001092971.1 | lysozyme | - |
| C5F72_RS12245 () | 2511172..2511654 | + | 483 | WP_159375984.1 | DUF2514 domain-containing protein | - |
| C5F72_RS12250 () | 2511659..2512630 | - | 972 | WP_170386723.1 | IS30-like element ISApl1 family transposase | - |
| C5F72_RS12255 () | 2513104..2513316 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| C5F72_RS12260 () | 2513327..2513515 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| C5F72_RS12265 () | 2513518..2513583 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| C5F72_RS12270 () | 2513663..2513818 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| C5F72_RS12275 () | 2513990..2514163 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| C5F72_RS12280 () | 2514315..2514725 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| C5F72_RS12285 () | 2514783..2515016 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| C5F72_RS12290 () | 2515405..2515647 | + | 243 | Protein_2409 | DNA-packaging protein | - |
| C5F72_RS12295 () | 2515637..2516896 | + | 1260 | Protein_2410 | host specificity protein J | - |
| C5F72_RS12300 () | 2516887..2517195 | + | 309 | WP_071524888.1 | phage tail protein | - |
| C5F72_RS12305 () | 2517195..2517770 | + | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| C5F72_RS12310 () | 2517868..2518458 | - | 591 | WP_000086522.1 | recombinase family protein | - |
| C5F72_RS12315 () | 2518775..2519008 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| C5F72_RS12320 () | 2519077..2519190 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| C5F72_RS12325 () | 2519794..2521077 | + | 1284 | Protein_2416 | MHS family MFS transporter YdfJ | - |
| C5F72_RS12330 () | 2521166..2522626 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| C5F72_RS12335 () | 2522661..2522864 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C5F72_RS12340 () | 2523041..2523727 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C5F72_RS12345 () | 2523816..2524562 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|