MGE detailed information
MGE type: Prophage MGE length: 65154 bp
Accession: NZ_CP026935 Location: 2166627..2231780 Organism: Escherichia coli strain CFS3292 Replicon: chromosome
Accession: NZ_CP026935 Location: 2166627..2231780 Organism: Escherichia coli strain CFS3292 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5F72_RS10360 () | 2162710..2163351 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| C5F72_RS10365 () | 2163407..2164585 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| C5F72_RS10370 () | 2164719..2165009 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| C5F72_RS10375 () | 2165076..2165432 | + | 357 | WP_001295500.1 | protein YebF | - |
| C5F72_RS10380 () | 2165759..2166418 | + | 660 | WP_000024757.1 | tellurite resistance TerB family protein | - |
| C5F72_RS10385 () | 2166627..2168687 | + | 2061 | WP_000936927.1 | oligopeptidase B | - |
| C5F72_RS10390 () | 2168684..2169346 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| C5F72_RS10395 () | 2169370..2170026 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| C5F72_RS10400 () | 2170128..2170358 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| C5F72_RS10405 () | 2170497..2170871 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| C5F72_RS10410 () | 2170875..2171747 | + | 873 | WP_000879289.1 | copper homeostasis membrane protein CopD | - |
| C5F72_RS10415 () | 2171760..2172101 | + | 342 | WP_000976476.1 | YebY family protein | - |
| C5F72_RS10420 () | 2172494..2173570 | - | 1077 | WP_001189085.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| C5F72_RS10425 () | 2173536..2173817 | - | 282 | WP_001311878.1 | excisionase | - |
| C5F72_RS10430 () | 2173924..2174112 | - | 189 | WP_024165285.1 | DUF1187 family protein | - |
| - () | 2173928..2174106 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2173928..2174106 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2173928..2174106 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2173928..2174106 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| C5F72_RS10435 () | 2174105..2174299 | - | 195 | WP_010989194.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| C5F72_RS10440 () | 2174363..2175415 | - | 1053 | WP_159375964.1 | recombinase RecT | - |
| C5F72_RS10445 () | 2175427..2178498 | - | 3072 | WP_159375965.1 | exodeoxyribonuclease VIII | - |
| C5F72_RS10450 () | 2178598..2178873 | - | 276 | WP_001417976.1 | hypothetical protein | - |
| C5F72_RS10455 () | 2178948..2179124 | - | 177 | WP_000245528.1 | hypothetical protein | - |
| C5F72_RS10460 () | 2179118..2179339 | - | 222 | WP_099368359.1 | cell division protein FtsZ | - |
| C5F72_RS10465 () | 2179735..2179929 | + | 195 | WP_001419881.1 | hypothetical protein | - |
| C5F72_RS10470 () | 2179895..2180113 | - | 219 | WP_089553251.1 | hypothetical protein | - |
| C5F72_RS10475 () | 2180414..2180833 | - | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| C5F72_RS10480 () | 2180930..2181172 | + | 243 | WP_001033914.1 | helix-turn-helix domain-containing protein | - |
| C5F72_RS10485 () | 2181169..2181591 | + | 423 | WP_000702025.1 | hypothetical protein | - |
| C5F72_RS10490 () | 2181669..2182463 | + | 795 | WP_001435989.1 | hypothetical protein | - |
| C5F72_RS10495 () | 2182470..2183216 | + | 747 | WP_044805258.1 | ATP-binding protein | - |
| C5F72_RS10500 () | 2183239..2184000 | + | 762 | WP_159375966.1 | DUF1627 domain-containing protein | - |
| C5F72_RS10505 () | 2184008..2184424 | + | 417 | Protein_2054 | DUF977 family protein | - |
| C5F72_RS10510 () | 2184482..2184837 | + | 356 | Protein_2055 | hypothetical protein | - |
| C5F72_RS10515 () | 2185110..2185688 | + | 579 | WP_001204666.1 | sce7726 family protein | - |
| C5F72_RS10520 () | 2185648..2186745 | - | 1098 | WP_000156214.1 | beta family protein | - |
| C5F72_RS10525 () | 2187303..2187458 | + | 156 | WP_197970453.1 | type I toxin-antitoxin system Hok family toxin | - |
| C5F72_RS10530 () | 2188018..2188617 | + | 600 | WP_021572520.1 | DUF1367 family protein | - |
| C5F72_RS10535 () | 2188617..2188907 | + | 291 | WP_000228018.1 | DUF1364 domain-containing protein | - |
| C5F72_RS10540 () | 2188904..2189458 | + | 555 | WP_021572521.1 | DUF1133 family protein | - |
| C5F72_RS10545 () | 2189731..2190284 | + | 554 | Protein_2062 | ORF6N domain-containing protein | - |
| C5F72_RS10550 () | 2190518..2191087 | + | 570 | WP_001208723.1 | hypothetical protein | - |
| C5F72_RS10555 () | 2191056..2191271 | - | 216 | WP_071779784.1 | hypothetical protein | - |
| C5F72_RS10560 () | 2191435..2191776 | + | 342 | WP_000781775.1 | phage holin, lambda family | - |
| C5F72_RS10565 () | 2191780..2192256 | + | 477 | WP_001194115.1 | glycoside hydrolase family protein | - |
| C5F72_RS10570 () | 2192240..2192632 | + | 393 | WP_159375969.1 | DUF2570 domain-containing protein | - |
| C5F72_RS10575 () | 2192776..2192961 | + | 186 | WP_000113283.1 | hypothetical protein | - |
| C5F72_RS10580 () | 2193099..2193554 | - | 456 | WP_159375970.1 | hypothetical protein | - |
| C5F72_RS10585 () | 2193577..2194128 | + | 552 | WP_072645189.1 | terminase small subunit | - |
| C5F72_RS10590 () | 2194131..2195753 | + | 1623 | WP_159375971.1 | TerL protein | - |
| C5F72_RS10595 () | 2195753..2197219 | + | 1467 | WP_000113487.1 | DUF1073 domain-containing protein | - |
| C5F72_RS10600 () | 2197110..2197844 | + | 735 | WP_159376071.1 | minor capsid protein | - |
| C5F72_RS10605 () | 2197859..2199079 | + | 1221 | WP_042093526.1 | DUF2213 domain-containing protein | - |
| C5F72_RS10610 () | 2199083..2199589 | + | 507 | WP_001066731.1 | hypothetical protein | - |
| C5F72_RS10615 () | 2199601..2200542 | + | 942 | WP_159375972.1 | DUF2184 domain-containing protein | - |
| C5F72_RS10620 () | 2200539..2200773 | - | 235 | Protein_2077 | hypothetical protein | - |
| C5F72_RS10625 () | 2200772..2201179 | + | 408 | WP_032197767.1 | DUF4054 domain-containing protein | - |
| C5F72_RS10630 () | 2201176..2201730 | + | 555 | WP_021517253.1 | hypothetical protein | - |
| C5F72_RS10635 () | 2201717..2202106 | + | 390 | WP_001142484.1 | hypothetical protein | - |
| C5F72_RS10640 () | 2202081..2202644 | + | 564 | WP_001349562.1 | hypothetical protein | - |
| C5F72_RS10645 () | 2202648..2203793 | + | 1146 | WP_159375973.1 | DUF3383 family protein | - |
| C5F72_RS10650 () | 2203804..2204244 | + | 441 | WP_000109249.1 | DUF3277 family protein | - |
| C5F72_RS10655 () | 2204248..2204700 | + | 453 | WP_000393958.1 | hypothetical protein | - |
| C5F72_RS10660 () | 2204878..2206884 | + | 2007 | WP_159375974.1 | lytic transglycosylase catalytic | - |
| C5F72_RS10665 () | 2206884..2207534 | + | 651 | WP_000346972.1 | hypothetical protein | - |
| C5F72_RS10670 () | 2207538..2207840 | + | 303 | WP_000648663.1 | hypothetical protein | - |
| C5F72_RS10675 () | 2207843..2208877 | + | 1035 | WP_057781017.1 | hypothetical protein | - |
| C5F72_RS10680 () | 2208874..2209209 | + | 336 | WP_000755137.1 | hypothetical protein | - |
| C5F72_RS10685 () | 2209349..2209588 | + | 240 | WP_000466689.1 | DUF4282 domain-containing protein | - |
| C5F72_RS10690 () | 2209648..2210400 | + | 753 | WP_053877862.1 | translation initiation factor IF-2 | - |
| C5F72_RS10695 () | 2210400..2210753 | + | 354 | WP_159375975.1 | hypothetical protein | - |
| C5F72_RS10700 () | 2210753..2211952 | + | 1200 | WP_159375976.1 | baseplate J/gp47 family protein | - |
| C5F72_RS10705 () | 2211949..2212629 | + | 681 | WP_159375977.1 | DUF2612 domain-containing protein | - |
| C5F72_RS10710 () | 2212629..2213420 | + | 792 | WP_175188402.1 | hypothetical protein | - |
| C5F72_RS10715 () | 2213423..2213866 | + | 444 | WP_001089533.1 | tail fiber assembly protein | - |
| C5F72_RS10720 () | 2213838..2214440 | - | 603 | WP_181261353.1 | tail fiber assembly protein | - |
| C5F72_RS10725 () | 2214440..2214946 | - | 507 | WP_175188432.1 | phage tail protein | - |
| C5F72_RS10730 () | 2215018..2215572 | + | 555 | WP_159375978.1 | site-specific DNA recombinase | - |
| C5F72_RS10735 () | 2216037..2216693 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| C5F72_RS10740 () | 2216694..2216885 | - | 192 | WP_000457842.1 | YebW family protein | - |
| C5F72_RS10745 () | 2216990..2217226 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| C5F72_RS10750 () | 2217344..2218783 | - | 1440 | WP_001352260.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| C5F72_RS10755 () | 2218863..2221496 | - | 2634 | WP_001326728.1 | lipid-binding membrane homeostasis protein YebT | - |
| C5F72_RS10760 () | 2221465..2222748 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| C5F72_RS10765 () | 2222878..2223375 | + | 498 | WP_001043877.1 | L-methionine (R)-S-oxide reductase | - |
| C5F72_RS10770 () | 2223472..2224170 | + | 699 | WP_000431381.1 | RNA chaperone ProQ | - |
| C5F72_RS10775 () | 2224190..2226238 | + | 2049 | WP_001055791.1 | carboxy terminal-processing peptidase | - |
| C5F72_RS10780 () | 2226430..2227311 | + | 882 | WP_000984520.1 | protease HtpX | - |
| C5F72_RS10785 () | 2227357..2228730 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| C5F72_RS10790 () | 2228907..2229698 | + | 792 | WP_001262203.1 | DNA-binding transcriptional regulator KdgR | - |
| C5F72_RS10795 () | 2229842..2230081 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| C5F72_RS10800 () | 2230240..2230383 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| C5F72_RS10805 () | 2230458..2230745 | + | 288 | WP_001006866.1 | YebO family protein | - |
| C5F72_RS10810 () | 2231415..2231558 | + | 144 | WP_001295496.1 | YobF family protein | - |
| C5F72_RS10815 () | 2231571..2231780 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| C5F72_RS10820 () | 2231946..2232755 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| C5F72_RS10825 () | 2232752..2233318 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| C5F72_RS10830 () | 2233747..2234205 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| C5F72_RS10835 () | 2234260..2235111 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| C5F72_RS10840 () | 2235124..2235924 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|