MGE detailed information
MGE type: Conjugative plasmid MGE length: 62468 bp
Accession: NZ_CP026931 Location: 1..62468 Organism: Escherichia coli strain CFS3246 Replicon: plasmid pCFS3246-2
Accession: NZ_CP026931 Location: 1..62468 Organism: Escherichia coli strain CFS3246 Replicon: plasmid pCFS3246-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4962_RS24465 () | 1561..1701 | + | 141 | WP_165488741.1 | hypothetical protein | - |
| C4962_RS23935 () | 1825..2076 | + | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| C4962_RS23940 () | 2073..2360 | + | 288 | WP_000222768.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C4962_RS23945 () | 3506..4849 | + | 1344 | WP_140431778.1 | hypothetical protein | - |
| C4962_RS23950 () | 5062..5412 | + | 351 | Protein_5 | DUF1281 domain-containing protein | - |
| C4962_RS23955 () | 5982..6326 | - | 345 | WP_053913472.1 | hypothetical protein | - |
| C4962_RS23960 () | 6648..7628 | + | 981 | WP_053913466.1 | plasmid segregation protein ParM | - |
| C4962_RS23965 () | 7631..8053 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| C4962_RS23970 () | 8057..8368 | + | 312 | WP_072181373.1 | hypothetical protein | - |
| C4962_RS23975 () | 8445..9128 | + | 684 | WP_010380907.1 | DNA methylase | - |
| C4962_RS23980 () | 9129..9350 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| C4962_RS23985 () | 9362..9796 | + | 435 | WP_087851964.1 | DUF1380 family protein | - |
| C4962_RS23990 () | 9847..10072 | + | 226 | Protein_13 | hypothetical protein | - |
| C4962_RS23995 () | 10496..11064 | + | 569 | Protein_14 | DUF1472 domain-containing protein | - |
| C4962_RS24000 () | 11160..11462 | + | 303 | WP_074151244.1 | antirestriction protein | - |
| C4962_RS24005 () | 11509..11931 | + | 423 | WP_096095854.1 | DUF1380 family protein | - |
| C4962_RS24010 () | 11928..12119 | + | 192 | WP_001027504.1 | hypothetical protein | - |
| C4962_RS24470 () | 12388..12636 | - | 249 | WP_077815099.1 | hypothetical protein | - |
| C4962_RS24020 () | 13153..13383 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C4962_RS24025 () | 13435..14796 | + | 1362 | WP_063078170.1 | DUF3560 domain-containing protein | - |
| C4962_RS24030 () | 14842..15405 | + | 564 | WP_042634411.1 | class I SAM-dependent methyltransferase | - |
| C4962_RS24475 () | 15386..15760 | - | 375 | WP_000388242.1 | hypothetical protein | - |
| C4962_RS24035 () | 15822..16009 | + | 188 | Protein_23 | hypothetical protein | - |
| C4962_RS24040 () | 16243..16773 | + | 531 | WP_032214168.1 | single-stranded DNA-binding protein | - |
| C4962_RS24045 () | 16829..17062 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| C4962_RS24050 () | 17126..19084 | + | 1959 | WP_096095944.1 | ParB/RepB/Spo0J family partition protein | - |
| C4962_RS24055 () | 19139..19573 | + | 435 | WP_042634413.1 | conjugation system SOS inhibitor PsiB | - |
| C4962_RS24060 () | 19570..20289 | + | 720 | WP_042634414.1 | plasmid SOS inhibition protein A | - |
| C4962_RS24065 () | 20289..20807 | + | 519 | WP_001178554.1 | hypothetical protein | - |
| - () | 20783..20931 | + | 149 | NuclAT_0 | - | - |
| - () | 20783..20931 | + | 149 | NuclAT_0 | - | - |
| - () | 20783..20931 | + | 149 | NuclAT_0 | - | - |
| - () | 20783..20931 | + | 149 | NuclAT_0 | - | - |
| C4962_RS24070 () | 20983..21141 | + | 159 | WP_042634416.1 | type I toxin-antitoxin system Hok family toxin | - |
| C4962_RS24075 () | 21465..21687 | + | 223 | Protein_31 | hypothetical protein | - |
| C4962_RS24080 () | 21962..22258 | + | 297 | WP_001272240.1 | hypothetical protein | - |
| C4962_RS24085 () | 22361..23183 | + | 823 | Protein_33 | DUF945 domain-containing protein | - |
| C4962_RS24090 () | 23480..24070 | - | 591 | WP_165850686.1 | hypothetical protein | VF |
| C4962_RS24095 () | 24403..24786 | + | 384 | WP_001151530.1 | relaxosome protein TraM | - |
| C4962_RS24100 () | 24978..25625 | + | 648 | WP_042634329.1 | transcriptional regulator TraJ family protein | - |
| C4962_RS24105 () | 25733..25972 | + | 240 | WP_042357785.1 | conjugal transfer relaxosome protein TraY | - |
| C4962_RS24110 () | 26006..26368 | + | 363 | WP_033566647.1 | type IV conjugative transfer system pilin TraA | - |
| C4962_RS24115 () | 26373..26684 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| C4962_RS24120 () | 26706..27272 | + | 567 | WP_000399793.1 | type IV conjugative transfer system protein TraE | - |
| C4962_RS24125 () | 27283..27987 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| C4962_RS24130 () | 27987..29413 | + | 1427 | Protein_42 | conjugal transfer protein TraB | - |
| C4962_RS24135 () | 29403..29975 | + | 573 | WP_000002780.1 | conjugal transfer protein TraP | - |
| C4962_RS24140 () | 29972..30289 | + | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| C4962_RS24145 () | 30286..30537 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| C4962_RS24150 () | 30534..31049 | + | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C4962_RS24155 () | 31183..31404 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| C4962_RS24160 () | 31564..34191 | + | 2628 | WP_159373761.1 | type IV secretion system protein TraC | - |
| C4962_RS24165 () | 34188..34574 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| C4962_RS24170 () | 34571..35203 | + | 633 | WP_001377749.1 | type-F conjugative transfer system protein TraW | - |
| C4962_RS24175 () | 35200..36192 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| C4962_RS24180 () | 36218..36679 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| C4962_RS24185 () | 36709..37161 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| C4962_RS24190 () | 37189..37827 | + | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C4962_RS24195 () | 37824..39632 | + | 1809 | WP_000821821.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C4962_RS24200 () | 39659..39916 | + | 258 | WP_000864317.1 | conjugal transfer protein TrbE | - |
| C4962_RS24205 () | 39909..40652 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C4962_RS24210 () | 40668..41015 | + | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| C4962_RS24215 () | 41017..41331 | - | 315 | WP_000415566.1 | protein ArtA | - |
| C4962_RS24220 () | 41412..41696 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C4962_RS24225 () | 41683..42228 | + | 546 | WP_042634328.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C4962_RS24230 () | 42158..42499 | + | 342 | WP_071528036.1 | P-type conjugative transfer protein TrbJ | - |
| C4962_RS24235 () | 42453..42878 | + | 426 | WP_072043015.1 | F-type conjugal transfer protein TrbF | - |
| C4962_RS24240 () | 42865..44238 | + | 1374 | WP_042634326.1 | conjugal transfer protein TraH | - |
| C4962_RS24245 () | 44235..47054 | + | 2820 | WP_096095908.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C4962_RS24250 () | 47073..47570 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| C4962_RS24255 () | 47603..48334 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| C4962_RS24260 () | 48537..49274 | + | 738 | WP_000199911.1 | hypothetical protein | - |
| C4962_RS24265 () | 49325..51559 | + | 2235 | WP_159373762.1 | type IV conjugative transfer system coupling protein TraD | - |
| C4962_RS24270 () | 51559..56829 | + | 5271 | WP_096174268.1 | Multifunctional conjugation protein TraI | Relaxase |
| C4962_RS24275 () | 56849..57595 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| C4962_RS24280 () | 57650..58210 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| C4962_RS24285 () | 58342..58554 | + | 213 | WP_001385659.1 | hypothetical protein | - |
| C4962_RS24290 () | 58841..59518 | + | 678 | WP_089564147.1 | hypothetical protein | - |
| C4962_RS24295 () | 59897..60088 | + | 192 | WP_071849536.1 | hypothetical protein | - |
| C4962_RS24300 () | 60332..60793 | + | 462 | WP_069040904.1 | thermonuclease family protein | - |
| C4962_RS24305 () | 60839..61048 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| C4962_RS24310 () | 61086..61676 | + | 591 | WP_012817838.1 | DUF2726 domain-containing protein | - |
| C4962_RS24315 () | 61916..62176 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|