NZ_CP0269292457896..2470705

MGE detailed information

MGE type: Genomic_island        MGE length: 12810 bp
Accession: NZ_CP026929        Location: 2457896..2470705         Organism: Escherichia coli strain CFS3246       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C4962_RS12065 () 2457896..2458162 + 267 WP_001301023.1 type II toxin-antitoxin system antitoxin HipB Antitoxin Detail
C4962_RS12070 () 2458162..2459484 + 1323 WP_001125439.1 type II toxin-antitoxin system serine/threonine protein kinase toxin HipA Toxin Detail
C4962_RS12075 () 2459796..2460004 + 209 Protein_2369 helix-turn-helix transcriptional regulator -
C4962_RS12080 () 2460259..2461485 + 1227 Protein_2370 fimbrial biogenesis outer membrane usher protein -
C4962_RS12085 () 2461499..2462029 + 531 WP_000876763.1 type 1 fimbrial protein -
C4962_RS12090 () 2462042..2462545 + 504 WP_000825452.1 type 1 fimbrial protein -
C4962_RS12095 () 2462604..2463518 + 915 WP_000520662.1 fimbrial protein -
C4962_RS12100 () 2463852..2466131 + 2280 WP_000726691.1 acid resistance putative oxidoreductase YdeP -
C4962_RS12105 () 2466379..2466576 + 198 WP_000543384.1 two-component system connector SafA -
C4962_RS12110 () 2466651..2467412 + 762 WP_000060492.1 acid stress response transcriptional regulator YdeO -
C4962_RS12115 () 2467814..2469496 + 1683 WP_001295684.1 sulfatase -
C4962_RS12120 () 2469548..2470705 + 1158 WP_001301030.1 anaerobic sulfatase maturase -
C4962_RS12125 () 2470671..2470793 - 123 WP_120795387.1 protein YneP -
C4962_RS12130 () 2470996..2472681 + 1686 WP_000628576.1 ABC transporter ATP-binding protein/permease -
C4962_RS12135 () 2472719..2475091 + 2373 WP_089508029.1 TonB-dependent receptor plug domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20025 CP009789 1561271..1572871 0.003
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20066 HG738867 1469371..1480971 0.003
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1040 NC_000913 1580842..1592442 0.003
Escherichia coli str. K-12 substr. W3110 Genomic island TA21437 NC_007779 1582556..1594156 0.003
Escherichia coli HS Genomic island TA22421 NC_009800 1597665..1609265 0.005
Escherichia coli str. K-12 substr. DH10B Genomic island TA22685 NC_010473 1669461..1680091 0.006
Escherichia coli BW2952 Genomic island TA23853 NC_012759 1470925..1482525 0.003
Escherichia coli DH1 Genomic island TA27403 NC_017638 1563024..1574624 0.003
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29002 NC_020518 1287669..1299269 0.003
Escherichia coli BW25113 Genomic island TA48682 NZ_CP009273 1575099..1586699 0.003
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68424 NZ_CP017979 1484612..1496212 0.003
Escherichia coli strain DH5alpha Genomic island TA90478 NZ_CP025520 438284..449884 0.004
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285016 NZ_HG738867 1469371..1480971 0.003