MGE detailed information
MGE type: IScluster/Tn MGE length: 13695 bp
Accession: NZ_CP026878 Location: 382860..396554 Organism: Shigella dysenteriae strain 07-3308 Replicon: chromosome
Accession: NZ_CP026878 Location: 382860..396554 Organism: Shigella dysenteriae strain 07-3308 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P62_RS01965 () | 377903..380530 | + | 2628 | WP_001281279.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
| C1P62_RS01970 () | 380766..381107 | + | 342 | Protein_383 | DUF2138 family protein | - |
| C1P62_RS01975 () | 381104..381664 | + | 561 | WP_001215754.1 | DUF1175 domain-containing protein | - |
| C1P62_RS01980 () | 381722..382726 | - | 1005 | Protein_385 | tyrosine-type recombinase/integrase | - |
| C1P62_RS01985 () | 382860..383404 | + | 545 | Protein_386 | IS3 family transposase ISSfl10 | Transposase |
| C1P62_RS01995 () | 384671..385360 | + | 690 | Protein_388 | IS3 family transposase ISSd1 | Transposase |
| C1P62_RS02000 () | 385413..385823 | + | 411 | WP_000814621.1 | recombination protein NinB | - |
| C1P62_RS02005 () | 385820..386041 | + | 222 | WP_001254231.1 | NinE family protein | - |
| C1P62_RS02010 () | 386038..386346 | - | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| C1P62_RS02015 () | 386336..386665 | - | 330 | WP_024258354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P62_RS02020 () | 386986..387663 | + | 678 | WP_000957540.1 | phage antirepressor Ant | - |
| C1P62_RS02025 () | 387738..388460 | + | 723 | WP_001004003.1 | DNA-binding protein | - |
| C1P62_RS02030 () | 388498..388638 | + | 141 | Protein_395 | HNH endonuclease | - |
| C1P62_RS02040 () | 388695..389389 | + | 695 | WP_134801589.1 | IS1 family transposase IS1N | Transposase |
| C1P62_RS02045 () | 389405..389725 | - | 321 | Protein_397 | ABC transporter arginine-binding protein 1 | VF |
| C1P62_RS02050 () | 390016..390684 | - | 669 | WP_000464490.1 | arginine ABC transporter permease ArtM | - |
| C1P62_RS02055 () | 390684..391400 | - | 717 | WP_001001693.1 | arginine ABC transporter permease ArtQ | - |
| C1P62_RS02060 () | 391407..392138 | - | 732 | WP_000756570.1 | arginine ABC transporter substrate-binding protein | - |
| C1P62_RS02065 () | 392156..392884 | - | 729 | WP_000027205.1 | Arginine transport ATP-binding protein ArtP | VF |
| C1P62_RS02070 () | 393102..393619 | - | 518 | Protein_402 | lipoprotein | - |
| C1P62_RS02085 () | 394775..395536 | - | 762 | Protein_404 | pentapeptide repeat-containing protein | - |
| C1P62_RS02095 () | 395860..396554 | + | 695 | WP_134801557.1 | IS1 family transposase IS1N | Transposase |
| C1P62_RS02100 () | 396570..397091 | + | 522 | Protein_406 | pentapeptide repeat-containing protein | - |
| C1P62_RS02105 () | 397107..397804 | - | 698 | Protein_407 | IS1 family transposase | - |
| C1P62_RS02110 () | 397860..398267 | + | 408 | Protein_408 | pentapeptide repeat-containing protein | - |
| C1P62_RS02120 () | 398478..398801 | + | 324 | WP_001160737.1 | heavy metal-binding domain-containing protein | - |
| C1P62_RS02125 () | 398798..399628 | + | 831 | WP_001255151.1 | N-acetylmuramoyl-L-alanine amidase AmiD | - |
| C1P62_RS02130 () | 399625..400638 | - | 1014 | WP_005016000.1 | NAD(P)-dependent oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|