MGE detailed information
MGE type: Conjugative plasmid MGE length: 84078 bp
Accession: NZ_CP026855 Location: 1..84078 Organism: Escherichia coli strain MS7163 Replicon: plasmid pMS7163B
Accession: NZ_CP026855 Location: 1..84078 Organism: Escherichia coli strain MS7163 Replicon: plasmid pMS7163B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MS7163_RS27470 () | 259..571 | - | 313 | Protein_1 | hypothetical protein | - |
| MS7163_RS27475 () | 568..1470 | - | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| MS7163_RS27485 () | 1879..2127 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| MS7163_RS27490 () | 2124..2561 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| MS7163_RS27495 () | 2561..3832 | + | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| MS7163_RS27500 () | 4052..4678 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| MS7163_RS28505 () | 4675..4977 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| MS7163_RS27515 () | 5488..6834 | - | 1347 | WP_001132022.1 | hypothetical protein | - |
| MS7163_RS27525 () | 7188..7790 | + | 603 | WP_000517694.1 | hypothetical protein | - |
| MS7163_RS28510 () | 7846..8028 | + | 183 | Protein_10 | hypothetical protein | - |
| MS7163_RS28515 () | 8028..8294 | + | 267 | WP_000627831.1 | hypothetical protein | - |
| MS7163_RS27545 () | 8485..8766 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| MS7163_RS27550 () | 8872..9147 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| MS7163_RS27555 () | 9147..9431 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| MS7163_RS27575 () | 10334..11206 | - | 873 | WP_000729437.1 | incFII family plasmid replication initiator RepA | - |
| MS7163_RS27590 () | 11909..12550 | + | 642 | WP_000335849.1 | transcription termination factor NusG | - |
| MS7163_RS27595 () | 12691..13353 | + | 663 | WP_000154142.1 | hypothetical protein | - |
| MS7163_RS28520 () | 13620..13763 | + | 144 | WP_072105535.1 | hypothetical protein | - |
| MS7163_RS27605 () | 13769..14086 | + | 318 | WP_001330559.1 | PilI type IV pilus biogenesis protein | - |
| MS7163_RS27610 () | 14202..14537 | + | 336 | WP_001335624.1 | hypothetical protein | - |
| MS7163_RS27615 () | 14764..15834 | + | 1071 | WP_000730430.1 | hypothetical protein | VF |
| MS7163_RS27620 () | 15838..16275 | + | 438 | WP_000539952.1 | hypothetical protein | VF |
| MS7163_RS27625 () | 16307..17926 | + | 1620 | WP_001035565.1 | Outer membrane lipoprotein BfpB | VF |
| MS7163_RS27630 () | 17947..19242 | + | 1296 | WP_000129882.1 | type 4b pilus protein PilO2 | - |
| MS7163_RS27635 () | 19232..19690 | + | 459 | WP_000095885.1 | hypothetical protein | VF |
| MS7163_RS27640 () | 19794..21302 | + | 1509 | WP_000880805.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| MS7163_RS27645 () | 21304..22398 | + | 1095 | WP_000697158.1 | type II secretion system F family protein | - |
| MS7163_RS27650 () | 22460..22996 | + | 537 | WP_000111534.1 | hypothetical protein | VF |
| MS7163_RS27655 () | 23041..23526 | + | 486 | WP_001080767.1 | hypothetical protein | VF |
| MS7163_RS27660 () | 23542..24168 | + | 627 | WP_000939245.1 | prepilin peptidase | - |
| MS7163_RS27665 () | 24186..25547 | + | 1362 | WP_001168171.1 | hypothetical protein | VF |
| MS7163_RS27675 () | 26020..26841 | + | 822 | WP_000845373.1 | hypothetical protein | - |
| MS7163_RS27680 () | 26943..28145 | + | 1203 | WP_000979993.1 | conjugal transfer protein TraF | - |
| MS7163_RS27685 () | 28249..28707 | + | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| MS7163_RS27690 () | 28704..29540 | + | 837 | WP_000745049.1 | hypothetical protein | VF |
| MS7163_RS27695 () | 29524..30672 | + | 1149 | WP_000775210.1 | putative protein YggR | VF |
| MS7163_RS27700 () | 30669..30959 | + | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| MS7163_RS27705 () | 31023..35084 | + | 4062 | WP_000842456.1 | DNA primase | - |
| MS7163_RS27710 () | 35101..35451 | + | 351 | WP_001056367.1 | hypothetical protein | - |
| MS7163_RS27715 () | 35463..36158 | + | 696 | WP_001287545.1 | DotI/IcmL family type IV secretion protein | - |
| MS7163_RS27720 () | 36169..37143 | + | 975 | WP_000547386.1 | hypothetical protein | VF |
| MS7163_RS27725 () | 37147..38484 | + | 1338 | WP_001272020.1 | conjugal transfer protein TraO | - |
| MS7163_RS27730 () | 38481..39194 | + | 714 | WP_000787002.1 | conjugal transfer protein TraP | - |
| MS7163_RS27735 () | 39194..39721 | + | 528 | WP_001388619.1 | conjugal transfer protein TraQ | - |
| MS7163_RS27740 () | 39768..40166 | + | 399 | WP_000088813.1 | hypothetical protein | - |
| MS7163_RS27745 () | 40223..40474 | + | 252 | WP_001277573.1 | hypothetical protein | - |
| MS7163_RS27750 () | 40389..41207 | + | 819 | WP_000753550.1 | hypothetical protein | - |
| MS7163_RS27760 () | 41502..44546 | + | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| MS7163_RS27765 () | 44546..45166 | + | 621 | WP_042960560.1 | hypothetical protein | - |
| MS7163_RS27770 () | 45124..46329 | + | 1206 | WP_001189549.1 | conjugal transfer protein TraW | - |
| MS7163_RS27775 () | 46326..46895 | + | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| MS7163_RS27780 () | 46970..49135 | + | 2166 | WP_000691810.1 | DotA/TraY family protein | - |
| MS7163_RS27785 () | 49224..49874 | + | 651 | WP_001044247.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| MS7163_RS27790 () | 50148..51734 | + | 1587 | WP_000004564.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| MS7163_RS27795 () | 51872..52024 | - | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| MS7163_RS27800 () | 52354..52596 | + | 243 | WP_001363144.1 | hypothetical protein | - |
| MS7163_RS27810 () | 52895..53263 | + | 369 | WP_001302696.1 | hypothetical protein | - |
| MS7163_RS27815 () | 53267..53482 | + | 216 | WP_000266544.1 | hypothetical protein | - |
| MS7163_RS27825 () | 53680..54303 | - | 624 | WP_001155250.1 | DNA-binding protein | - |
| MS7163_RS27830 () | 54463..54930 | + | 468 | WP_000598962.1 | thermonuclease family protein | - |
| MS7163_RS28525 () | 55080..55256 | + | 177 | WP_001054907.1 | hypothetical protein | - |
| MS7163_RS27835 () | 55319..55570 | - | 252 | WP_001081067.1 | hypothetical protein | - |
| MS7163_RS27845 () | 56211..57509 | + | 1299 | WP_001402878.1 | IncI1-type conjugal transfer protein TrbA | - |
| MS7163_RS27850 () | 57506..58630 | + | 1125 | WP_000152380.1 | DsbC family protein | - |
| MS7163_RS27855 () | 58611..60914 | + | 2304 | WP_106919447.1 | TraM recognition domain-containing protein | - |
| MS7163_RS27875 () | 61778..62593 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| MS7163_RS27880 () | 62654..63181 | + | 528 | Protein_67 | phosphotransferase | - |
| MS7163_RS27885 () | 63202..63675 | + | 474 | WP_021529707.1 | Dihydrofolate reductase type 1 | ARG |
| MS7163_RS27890 () | 63750..64025 | + | 276 | Protein_69 | aminoglycoside phosphotransferase APH(3') | - |
| MS7163_RS27895 () | 64025..64861 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| MS7163_RS27900 () | 64968..65372 | - | 405 | Protein_71 | IS91 family transposase ISPps1 | Transposase |
| MS7163_RS27905 () | 65730..66080 | - | 351 | Protein_72 | cell envelope integrity protein TolA | - |
| MS7163_RS27910 () | 66148..68859 | - | 2712 | WP_042002545.1 | Protein TraI | Relaxase |
| MS7163_RS27915 () | 68871..69203 | - | 333 | WP_001291058.1 | hypothetical protein | - |
| MS7163_RS27920 () | 69436..69771 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| MS7163_RS27925 () | 69857..70705 | - | 849 | WP_001077030.1 | DUF4942 domain-containing protein | - |
| MS7163_RS28530 () | 71054..71251 | + | 198 | WP_053882462.1 | hypothetical protein | - |
| MS7163_RS27940 () | 71285..71536 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| MS7163_RS27945 () | 71567..71800 | - | 234 | WP_162861757.1 | hypothetical protein | - |
| MS7163_RS27950 () | 71800..72714 | - | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| MS7163_RS27955 () | 72711..73100 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| MS7163_RS27960 () | 73277..73543 | - | 267 | WP_001247860.1 | hypothetical protein | - |
| MS7163_RS27965 () | 73636..74070 | - | 435 | WP_000218862.1 | hypothetical protein | - |
| MS7163_RS27980 () | 74803..75303 | - | 501 | WP_014065718.1 | antirestriction protein ArdA | - |
| MS7163_RS27990 () | 75765..76361 | - | 597 | WP_000977998.1 | hypothetical protein | - |
| MS7163_RS27995 () | 76358..77077 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| MS7163_RS28000 () | 77074..77508 | - | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| MS7163_RS28005 () | 77563..79521 | - | 1959 | WP_001401579.1 | ParB/RepB/Spo0J family partition protein | - |
| MS7163_RS28010 () | 79580..79813 | - | 234 | WP_001401999.1 | DUF905 domain-containing protein | - |
| MS7163_RS28015 () | 79871..80398 | - | 528 | WP_021532391.1 | single-stranded DNA-binding protein | - |
| MS7163_RS28025 () | 80782..81153 | - | 372 | WP_072105516.1 | hypothetical protein | - |
| MS7163_RS28030 () | 81167..81358 | - | 192 | WP_001024838.1 | hypothetical protein | - |
| MS7163_RS28035 () | 81355..81777 | - | 423 | WP_000271732.1 | DUF1380 family protein | - |
| MS7163_RS28040 () | 81824..82126 | - | 303 | WP_072105978.1 | antirestriction protein | - |
| MS7163_RS28050 () | 82908..83342 | - | 435 | WP_000274421.1 | DUF1380 family protein | - |
| MS7163_RS28055 () | 83356..83577 | - | 222 | WP_001104873.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|