MGE detailed information
MGE type: Genomic_island MGE length: 20682 bp
Accession: NZ_CP026853 Location: 264180..284861 Organism: Escherichia coli strain MS7163 Replicon: chromosome
Accession: NZ_CP026853 Location: 264180..284861 Organism: Escherichia coli strain MS7163 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MS7163_RS01240 () | 260295..260720 | - | 426 | WP_000946067.1 | type VI secretion system baseplate subunit TssE | - |
| MS7163_RS01245 () | 260725..262209 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| MS7163_RS01250 () | 262232..262735 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| MS7163_RS01255 () | 263441..263959 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| MS7163_RS01260 () | 264180..266162 | + | 1983 | WP_000053636.1 | Actin cross-linking toxin VgrG1 | VF |
| MS7163_RS01265 () | 266269..267315 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| MS7163_RS01270 () | 267308..268747 | + | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| MS7163_RS01275 () | 268722..269012 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| MS7163_RS01280 () | 269270..270034 | + | 765 | Protein_239 | ISAs1 family transposase ISEc1 | Transposase |
| MS7163_RS01285 () | 270263..270766 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| MS7163_RS01290 () | 270860..271348 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| MS7163_RS01295 () | 271374..271568 | + | 195 | Protein_242 | ISAs1 family transposase | - |
| MS7163_RS01300 () | 271619..272389 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| MS7163_RS01305 () | 272570..273016 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| MS7163_RS01310 () | 273059..275503 | - | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| MS7163_RS01315 () | 275743..276321 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| MS7163_RS01320 () | 276526..277293 | + | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| MS7163_RS01325 () | 277264..278004 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| MS7163_RS01330 () | 278316..279065 | + | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| MS7163_RS01335 () | 279241..279738 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| MS7163_RS28065 () | 279821..279979 | - | 159 | WP_014639450.1 | hypothetical protein | - |
| MS7163_RS01340 () | 280058..281770 | - | 1713 | Protein_252 | Flagellar biosynthesis protein FlhA | VF |
| MS7163_RS01345 () | 281742..282527 | + | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| MS7163_RS01350 () | 282598..283653 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| MS7163_RS01355 () | 283705..283998 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| MS7163_RS01360 () | 284001..284399 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| MS7163_RS01365 () | 284409..284861 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| MS7163_RS01370 () | 285051..286190 | + | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| MS7163_RS01375 () | 286187..286801 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| MS7163_RS01380 () | 286858..288315 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| MS7163_RS01385 () | 288576..289034 | + | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| - () | 289630..289710 | + | 81 | NuclAT_4 | - | - |
| - () | 289630..289710 | + | 81 | NuclAT_4 | - | - |
| - () | 289630..289710 | + | 81 | NuclAT_4 | - | - |
| - () | 289630..289710 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|