MGE detailed information
MGE type: IScluster/Tn MGE length: 29942 bp
Accession: NZ_CP026846 Location: 2682433..2712374 Organism: Shigella boydii strain 59-2708 Replicon: chromosome
Accession: NZ_CP026846 Location: 2682433..2712374 Organism: Shigella boydii strain 59-2708 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P57_RS13500 (2677926) | 2677926..2678621 | + | 696 | WP_078167299.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| C1P57_RS13505 (2678618) | 2678618..2679282 | + | 665 | Protein_2618 | respiratory nitrate reductase subunit gamma | - |
| C1P57_RS13510 (2679361) | 2679361..2680254 | + | 894 | WP_078167298.1 | PhzF family isomerase | - |
| C1P57_RS13515 (2680350) | 2680350..2681194 | - | 845 | Protein_2620 | N-hydroxyarylamine O-acetyltransferase | - |
| C1P57_RS13520 (2681366) | 2681366..2681935 | + | 570 | WP_000085896.1 | flavin reductase family protein | - |
| C1P57_RS13525 (2681939) | 2681939..2682166 | - | 228 | WP_001120145.1 | tautomerase PptA | - |
| C1P57_RS13530 (2682266) | 2682266..2682391 | - | 126 | Protein_2623 | ISAs1 family transposase | - |
| C1P57_RS13545 (2683653) | 2683653..2683751 | - | 99 | Protein_2625 | IS66 family transposase ISSfl3 | Transposase |
| C1P57_RS13550 (2683914) | 2683914..2685142 | + | 1229 | WP_171764987.1 | IS3 family transposase IS2 | Transposase |
| C1P57_RS13555 (2685165) | 2685165..2685257 | + | 93 | Protein_2627 | type 1 fimbrial protein | - |
| C1P57_RS13560 (2685270) | 2685270..2685773 | + | 504 | WP_000825446.1 | Protein FimG | VF |
| C1P57_RS13565 (2685833) | 2685833..2686648 | + | 816 | Protein_2629 | Type 1 fimbrin D-mannose specific adhesin | VF |
| C1P57_RS13570 (2686646) | 2686646..2687992 | - | 1347 | WP_000483770.1 | IS4 family transposase IS4 | Transposase |
| C1P57_RS13575 (2688054) | 2688054..2688185 | + | 132 | Protein_2631 | fimbrial protein | - |
| C1P57_RS13580 (2688519) | 2688519..2690798 | + | 2280 | WP_078167387.1 | acid resistance putative oxidoreductase YdeP | - |
| C1P57_RS13585 (2691046) | 2691046..2691243 | + | 198 | WP_000543393.1 | two-component system connector SafA | - |
| C1P57_RS13590 (2691318) | 2691318..2692079 | + | 762 | WP_000060459.1 | acid stress response transcriptional regulator YdeO | - |
| C1P57_RS13595 (2692481) | 2692481..2692891 | + | 411 | Protein_2635 | sulfatase-like hydrolase/transferase | - |
| C1P57_RS13600 (2692972) | 2692972..2694161 | + | 1190 | Protein_2636 | IS4 family transposase ISSfl1 | Transposase |
| C1P57_RS24785 (2694192) | 2694192..2695115 | + | 924 | Protein_2637 | IS4 family transposase ISSfl1 | Transposase |
| C1P57_RS13605 (2695181) | 2695181..2696337 | + | 1157 | WP_134795745.1 | IS3 family transposase ISSd1 | Transposase |
| C1P57_RS13610 (2696377) | 2696377..2696742 | + | 366 | Protein_2639 | sulfatase | - |
| C1P57_RS13615 (2696794) | 2696794..2697951 | + | 1158 | WP_078167417.1 | anaerobic sulfatase maturase | - |
| C1P57_RS13620 (2697917) | 2697917..2698039 | - | 123 | WP_120795387.1 | protein YneP | - |
| C1P57_RS13625 (2698242) | 2698242..2699926 | + | 1685 | Protein_2642 | ABC transporter ATP-binding protein/permease | - |
| C1P57_RS13630 (2700020) | 2700020..2701366 | + | 1347 | WP_000483770.1 | IS4 family transposase IS4 | Transposase |
| C1P57_RS13635 (2701403) | 2701403..2703775 | + | 2373 | WP_078167414.1 | TonB-dependent receptor plug domain-containing protein | - |
| C1P57_RS13640 (2703832) | 2703832..2705058 | + | 1227 | Protein_2645 | pitrilysin family protein | - |
| C1P57_RS25310 (2706324) | 2706324..2706449 | - | 126 | Protein_2647 | protein YdfV | - |
| C1P57_RS13655 (2706474) | 2706474..2706713 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C1P57_RS13660 (2706713) | 2706713..2707000 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C1P57_RS13665 (2707072) | 2707072..2707227 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C1P57_RS13670 (2707445) | 2707445..2707696 | + | 252 | WP_000980987.1 | protein Rem | - |
| C1P57_RS13675 (2707763) | 2707763..2708041 | + | 279 | WP_024258459.1 | hypothetical protein | - |
| C1P57_RS13680 (2708043) | 2708043..2709086 | + | 1044 | WP_134795747.1 | DUF968 domain-containing protein | - |
| C1P57_RS13685 (2709099) | 2709099..2709456 | + | 358 | Protein_2654 | RusA family crossover junction endodeoxyribonuclease | - |
| C1P57_RS13690 (2709471) | 2709471..2710292 | + | 822 | WP_078167389.1 | antitermination protein | - |
| C1P57_RS13710 (2711218) | 2711218..2712374 | + | 1157 | Protein_2656 | IS3 family transposase ISSd1 | Transposase |
| C1P57_RS13715 (2712419) | 2712419..2712733 | - | 315 | Protein_2657 | hypothetical protein | - |
| C1P57_RS13720 (2713518) | 2713518..2713730 | - | 213 | WP_000882238.1 | DUF5445 family protein | - |
| C1P57_RS25315 (2713806) | 2713806..2714423 | - | 618 | Protein_2659 | glutathione S-transferase family protein | - |
| C1P57_RS13730 (2714690) | 2714690..2716189 | + | 1500 | WP_001300590.1 | L-asparagine permease | - |
| C1P57_RS13735 (2716302) | 2716302..2717354 | - | 1053 | WP_078166753.1 | YncE family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|