MGE detailed information
MGE type: IScluster/Tn MGE length: 10500 bp
Accession: NZ_CP026846 Location: 1205212..1215711 Organism: Shigella boydii strain 59-2708 Replicon: chromosome
Accession: NZ_CP026846 Location: 1205212..1215711 Organism: Shigella boydii strain 59-2708 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P57_RS05860 (1200289) | 1200289..1201014 | + | 726 | WP_000246882.1 | 30S ribosomal protein S2 | - |
| C1P57_RS05865 (1201272) | 1201272..1202123 | + | 852 | WP_000818114.1 | translation elongation factor Ts | - |
| C1P57_RS05870 (1202270) | 1202270..1202995 | + | 726 | WP_000224573.1 | UMP kinase | - |
| C1P57_RS05875 (1203287) | 1203287..1203844 | + | 558 | WP_000622418.1 | ribosome recycling factor | - |
| C1P57_RS05880 (1203936) | 1203936..1205132 | + | 1197 | WP_000811951.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| C1P57_RS05885 (1205212) | 1205212..1206515 | - | 1304 | Protein_1148 | IS4-like element IS4 family transposase | - |
| C1P57_RS05890 (1206720) | 1206720..1207394 | + | 675 | WP_004967157.1 | IS66-like element accessory protein TnpA | - |
| C1P57_RS05895 (1207391) | 1207391..1207738 | + | 348 | WP_000631709.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P57_RS05900 (1207758) | 1207758..1208401 | + | 644 | Protein_1151 | IS66-like element ISSfl3 family transposase | - |
| C1P57_RS05910 (1209744) | 1209744..1209878 | + | 135 | Protein_1153 | transposase | - |
| C1P57_RS05915 (1209948) | 1209948..1211481 | + | 1534 | WP_119181915.1 | IS3 family transposase | - |
| C1P57_RS05925 (1211933) | 1211933..1212055 | - | 123 | WP_223200913.1 | Hok/Gef family protein | Toxin Detail |
| C1P57_RS25060 (1212000) | 1212000..1212152 | - | 153 | Protein_1156 | DUF5431 family protein | - |
| - (1212140) | 1212140..1212346 | - | 207 | NuclAT_5 | - | Antitoxin Detail |
| - (1212140) | 1212140..1212346 | - | 207 | NuclAT_5 | - | Antitoxin Detail |
| - (1212140) | 1212140..1212346 | - | 207 | NuclAT_5 | - | Antitoxin Detail |
| - (1212140) | 1212140..1212346 | - | 207 | NuclAT_5 | - | Antitoxin Detail |
| C1P57_RS25065 (1212532) | 1212532..1212630 | - | 99 | Protein_1157 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P57_RS05940 (1212614) | 1212614..1213555 | - | 942 | Protein_1158 | IS66 family transposase | - |
| C1P57_RS05945 (1213575) | 1213575..1213921 | - | 347 | Protein_1159 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P57_RS05950 (1213921) | 1213921..1214298 | - | 378 | Protein_1160 | IS66-like element accessory protein TnpA | - |
| C1P57_RS05955 (1214365) | 1214365..1215711 | + | 1347 | WP_000483769.1 | IS4-like element IS4 family transposase | - |
| C1P57_RS05960 (1215902) | 1215902..1216660 | + | 759 | WP_001295562.1 | (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | - |
| C1P57_RS05965 (1216673) | 1216673..1217530 | + | 858 | WP_000922456.1 | phosphatidate cytidylyltransferase | - |
| C1P57_RS05970 (1217542) | 1217542..1218893 | + | 1352 | Protein_1164 | sigma E protease regulator RseP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|