MGE detailed information
MGE type: Prophage MGE length: 75935 bp
Accession: NZ_CP026840 Location: 71996..147930 Organism: Shigella dysenteriae strain ATCC 9753 Replicon: chromosome
Accession: NZ_CP026840 Location: 71996..147930 Organism: Shigella dysenteriae strain ATCC 9753 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P67_RS00400 () | 67420..69114 | - | 1695 | WP_077897108.1 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
| C1P67_RS00405 () | 69285..69467 | - | 183 | WP_000009307.1 | DUF2158 domain-containing protein | - |
| C1P67_RS00410 () | 69546..70463 | - | 918 | WP_000922682.1 | DUF808 domain-containing protein | - |
| C1P67_RS00415 () | 70636..71556 | + | 921 | WP_001212273.1 | drug/metabolite exporter YedA | - |
| C1P67_RS00420 () | 71545..72015 | - | 471 | WP_000786008.1 | VSPR family DNA mismatch endonuclease | - |
| C1P67_RS00425 () | 71996..73414 | - | 1419 | WP_001157236.1 | DNA-cytosine methyltransferase | - |
| C1P67_RS00430 () | 73481..74176 | - | 696 | WP_000365568.1 | phosphohydrolase | - |
| C1P67_RS00435 () | 74216..74497 | - | 282 | WP_001297704.1 | cell division protein DrpB | - |
| C1P67_RS00440 () | 75148..75726 | + | 579 | Protein_82 | porin | - |
| C1P67_RS00450 () | 77060..77557 | + | 498 | Protein_84 | porin | - |
| C1P67_RS00455 () | 77667..78364 | + | 698 | WP_226342157.1 | IS1 family transposase IS1X2 | Transposase |
| C1P67_RS26575 () | 78926..79009 | + | 84 | Protein_86 | protein deglycase HchA | - |
| C1P67_RS00465 () | 79063..79760 | + | 698 | WP_261949748.1 | IS1 family transposase IS1X2 | Transposase |
| C1P67_RS00470 () | 79778..80554 | + | 777 | Protein_88 | protein deglycase HchA | - |
| C1P67_RS00475 () | 80662..82020 | - | 1359 | WP_000826751.1 | two-component system sensor histidine kinase HprS | - |
| C1P67_RS00480 () | 82020..82691 | - | 672 | WP_001339045.1 | putative transcriptional regulatory protein YedW | VF |
| C1P67_RS00485 () | 82824..83237 | + | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| C1P67_RS00490 () | 83346..84350 | + | 1005 | WP_000740100.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| C1P67_RS00495 () | 84351..84986 | + | 636 | WP_001241113.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| C1P67_RS00500 () | 85243..85893 | + | 651 | WP_001007759.1 | metal-binding protein ZinT | - |
| C1P67_RS00505 () | 86111..87267 | + | 1157 | WP_094096479.1 | IS3 family transposase IS600 | Transposase |
| C1P67_RS00510 () | 87503..87598 | + | 96 | Protein_96 | cytochrome B | - |
| C1P67_RS00520 () | 88962..89369 | + | 408 | Protein_98 | cytochrome b | - |
| C1P67_RS00525 () | 90271..91439 | + | 1169 | WP_134807406.1 | IS3 family transposase ISLad1 | Transposase |
| C1P67_RS00535 () | 91599..91868 | - | 270 | WP_000937487.1 | tail fiber assembly protein | - |
| C1P67_RS00540 () | 91925..92593 | + | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| C1P67_RS00545 () | 92909..94552 | + | 1644 | WP_134807407.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| C1P67_RS00555 () | 94732..95355 | - | 624 | WP_000551126.1 | DUF4376 domain-containing protein | - |
| C1P67_RS00560 () | 95306..96574 | - | 1269 | WP_134807408.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C1P67_RS00565 () | 96598..97143 | - | 546 | WP_000902849.1 | tail fiber assembly protein | - |
| C1P67_RS26585 () | 97146..97376 | - | 231 | Protein_106 | hypothetical protein | - |
| C1P67_RS00575 () | 97428..98125 | + | 698 | WP_284520991.1 | IS1 family transposase IS1R | Transposase |
| C1P67_RS26590 () | 98142..98444 | - | 303 | Protein_108 | phage tail protein | - |
| C1P67_RS00585 () | 99121..99711 | - | 591 | Protein_109 | DUF2313 domain-containing protein | - |
| C1P67_RS00590 () | 99711..99935 | - | 225 | WP_073691608.1 | hypothetical protein | - |
| C1P67_RS00595 () | 99951..101107 | + | 1157 | WP_094096479.1 | IS3 family transposase IS600 | Transposase |
| C1P67_RS00605 () | 101157..101906 | - | 750 | Protein_112 | hypothetical protein | - |
| C1P67_RS00610 () | 101908..102186 | - | 279 | WP_000929754.1 | hypothetical protein | - |
| C1P67_RS00620 () | 102354..102509 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 102521..102579 | + | 59 | - | - | Antitoxin Detail |
| C1P67_RS00635 () | 103161..103577 | - | 417 | WP_005069274.1 | hypothetical protein | - |
| C1P67_RS00640 () | 103689..104069 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P67_RS00645 () | 104066..104413 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P67_RS00650 () | 104462..106000 | + | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| C1P67_RS00655 () | 106050..106505 | - | 456 | WP_000335375.1 | ead/Ea22-like family protein | - |
| C1P67_RS00660 () | 106492..106797 | - | 306 | WP_001266147.1 | DUF4406 domain-containing protein | - |
| C1P67_RS00665 () | 106794..107216 | - | 423 | WP_001151146.1 | DUF977 family protein | - |
| C1P67_RS00670 () | 107257..108327 | - | 1071 | WP_047204729.1 | phage replisome organizer | - |
| C1P67_RS00675 () | 108399..108824 | - | 426 | WP_000693847.1 | toxin YdaT family protein | - |
| C1P67_RS00680 () | 108821..109090 | - | 270 | WP_001117462.1 | helix-turn-helix domain-containing protein | - |
| C1P67_RS00685 () | 109106..110262 | + | 1157 | WP_094096479.1 | IS3 family transposase IS600 | Transposase |
| C1P67_RS00690 () | 110303..110895 | + | 593 | Protein_126 | hypothetical protein ; Integrase | Integrase |
| C1P67_RS00700 () | 111106..111903 | + | 798 | WP_001302302.1 | DgsA anti-repressor MtfA | - |
| C1P67_RS00710 () | 112393..118465 | + | 6073 | Protein_128 | Ig-like domain-containing protein | - |
| C1P67_RS00720 () | 119703..119909 | + | 207 | WP_005029688.1 | hypothetical protein | - |
| C1P67_RS00725 () | 119971..121127 | + | 1157 | WP_094096479.1 | IS3 family transposase IS600 | Transposase |
| C1P67_RS00730 () | 121170..122894 | + | 1725 | Protein_132 | Ig-like domain-containing protein | - |
| C1P67_RS00735 () | 123156..124208 | - | 1053 | WP_000480514.1 | glycosyltransferase family 9 protein | - |
| C1P67_RS00745 () | 125300..126616 | + | 1317 | WP_000378594.1 | shikimate transporter | - |
| C1P67_RS00750 () | 126718..128171 | + | 1454 | Protein_136 | AMP nucleosidase | - |
| C1P67_RS00755 () | 128514..128870 | + | 357 | Protein_137 | putative transcriptional regulatory protein YeeN | VF |
| C1P67_RS00760 () | 128927..129624 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C1P67_RS00765 () | 129639..130007 | + | 369 | Protein_139 | putative transcriptional regulatory protein YeeN | VF |
| C1P67_RS00775 () | 130642..131493 | - | 852 | Protein_140 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P67_RS00780 () | 131549..132246 | + | 698 | WP_261949748.1 | IS1 family transposase IS1X2 | Transposase |
| C1P67_RS00785 () | 132262..132902 | - | 641 | Protein_142 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P67_RS00795 () | 133176..134126 | - | 951 | WP_001010986.1 | HTH-type transcriptional regulator Cbl | - |
| C1P67_RS00800 () | 134228..135145 | - | 918 | WP_001011480.1 | nitrogen assimilation transcriptional regulator NAC | - |
| C1P67_RS00810 () | 135604..136539 | - | 936 | WP_000986350.1 | L,D-transpeptidase | - |
| C1P67_RS00815 () | 136601..137680 | - | 1080 | WP_001166156.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| C1P67_RS00820 () | 137692..138435 | - | 744 | WP_005042779.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| C1P67_RS00825 () | 138432..138977 | - | 546 | WP_000973150.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| C1P67_RS26910 () | 139129..139302 | - | 174 | Protein_149 | cobalamin biosynthesis protein | - |
| C1P67_RS26915 () | 139281..139469 | - | 189 | Protein_150 | IS4 family transposase | - |
| C1P67_RS00840 () | 140033..140729 | - | 697 | Protein_151 | IS1 family transposase IS1R | Transposase |
| C1P67_RS00845 () | 141205..142433 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| C1P67_RS26920 () | 142445..142546 | - | 102 | Protein_153 | IS66 family transposase ISEc22 | Transposase |
| C1P67_RS00855 () | 142595..142942 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P67_RS00860 () | 142939..143319 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P67_RS26925 () | 144148..144495 | + | 348 | WP_076487038.1 | transposase | - |
| C1P67_RS00875 () | 144833..145855 | + | 1023 | WP_000255950.1 | IS21 family transposase IS100kyp | Transposase |
| C1P67_RS00880 () | 145852..146328 | + | 477 | Protein_158 | IS21 family transposase IS100 | Transposase |
| C1P67_RS00885 () | 146383..147608 | + | 1226 | Protein_159 | IS3 family transposase | - |
| C1P67_RS00890 () | 147640..147930 | + | 291 | Protein_160 | IS21 family transposase IS100kyp | Transposase |
| C1P67_RS00900 () | 148120..148386 | + | 267 | WP_064717141.1 | EutP/PduV family microcompartment system protein | - |
| C1P67_RS00905 () | 148487..148816 | - | 330 | WP_000450409.1 | DUF496 family protein | - |
| C1P67_RS00910 () | 148988..150045 | - | 1058 | Protein_163 | FUSC family protein | - |
| C1P67_RS00920 () | 150243..150716 | - | 474 | WP_001105385.1 | DNA gyrase inhibitor SbmC | - |
| C1P67_RS00925 () | 150834..152000 | - | 1167 | Protein_165 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|