MGE detailed information
MGE type: Prophage MGE length: 56838 bp
Accession: NZ_CP026840 Location: 3983842..4040679 Organism: Shigella dysenteriae strain ATCC 9753 Replicon: chromosome
Accession: NZ_CP026840 Location: 3983842..4040679 Organism: Shigella dysenteriae strain ATCC 9753 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P67_RS20665 () | 3979037..3980041 | + | 1005 | WP_000994889.1 | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF | - |
| C1P67_RS20670 () | 3980094..3980423 | - | 330 | WP_000366959.1 | HI1450 family dsDNA-mimic protein | - |
| C1P67_RS20675 () | 3980458..3981918 | - | 1461 | WP_000214508.1 | cardiolipin synthase | - |
| C1P67_RS20680 () | 3982061..3982234 | + | 174 | WP_001309467.1 | YciY family protein | - |
| C1P67_RS20685 () | 3982289..3983542 | - | 1254 | WP_005031395.1 | voltage-gated potassium channel protein | - |
| C1P67_RS20690 () | 3983842..3984138 | - | 297 | WP_000967595.1 | YciI family protein | - |
| C1P67_RS20695 () | 3984353..3985081 | + | 729 | WP_162281807.1 | Protein TonB | VF |
| C1P67_RS20700 () | 3985121..3985519 | - | 399 | WP_000108160.1 | acyl-CoA thioester hydrolase YciA | - |
| C1P67_RS20705 () | 3985624..3986163 | - | 540 | WP_000808667.1 | septation protein A | - |
| C1P67_RS20710 () | 3986193..3986936 | - | 744 | WP_000028541.1 | YciC family protein | - |
| C1P67_RS20715 () | 3986964..3987053 | - | 90 | Protein_3986 | YkgJ family cysteine cluster protein | - |
| C1P67_RS20720 () | 3987293..3987931 | + | 639 | WP_000737224.1 | outer membrane protein OmpW | - |
| C1P67_RS20725 () | 3987977..3989107 | - | 1131 | WP_000113662.1 | hypothetical protein ; Integrase | Integrase |
| C1P67_RS20730 () | 3989085..3989333 | - | 249 | WP_000113189.1 | excisionase | - |
| C1P67_RS20735 () | 3989398..3991872 | - | 2475 | WP_000048473.1 | exonuclease | - |
| C1P67_RS20740 () | 3991968..3992156 | - | 189 | WP_000199480.1 | DUF1482 family protein | - |
| C1P67_RS27695 () | 3992153..3992446 | - | 294 | WP_012601940.1 | cell division inhibition protein DicB | - |
| C1P67_RS20750 () | 3992874..3993248 | - | 375 | WP_005031383.1 | hypothetical protein | - |
| C1P67_RS20755 () | 3993260..3993412 | - | 153 | WP_000379596.1 | DUF1391 family protein | - |
| C1P67_RS20760 () | 3993601..3994008 | - | 408 | WP_001003379.1 | helix-turn-helix domain-containing protein | - |
| C1P67_RS20765 () | 3994086..3994313 | + | 228 | WP_000476986.1 | Cro/CI family transcriptional regulator | - |
| C1P67_RS20770 () | 3994297..3994848 | + | 552 | WP_000705383.1 | toxin YdaT family protein | - |
| C1P67_RS20775 () | 3994820..3995860 | + | 1041 | WP_000020541.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| C1P67_RS20780 () | 3995853..3996314 | + | 462 | WP_000139457.1 | replication protein P | - |
| C1P67_RS20785 () | 3996348..3997118 | + | 771 | WP_000450707.1 | DUF1627 domain-containing protein | - |
| C1P67_RS20790 () | 3997134..3997526 | + | 393 | WP_001141099.1 | DUF977 family protein | - |
| C1P67_RS20795 () | 3997523..3997819 | + | 297 | WP_001266130.1 | DUF4406 domain-containing protein | - |
| C1P67_RS20800 () | 3997816..3998277 | + | 462 | WP_001209470.1 | sigma-E factor regulatory protein RseB domain-containing protein | - |
| C1P67_RS20805 () | 3998255..3998611 | + | 357 | WP_000403782.1 | hypothetical protein | - |
| C1P67_RS20810 () | 3998707..3998889 | + | 183 | WP_001224665.1 | hypothetical protein | - |
| C1P67_RS26775 () | 3998882..3999058 | + | 177 | WP_000753053.1 | hypothetical protein | - |
| C1P67_RS20815 () | 3999055..3999414 | + | 360 | WP_001289986.1 | hypothetical protein | - |
| C1P67_RS20820 () | 3999415..3999630 | + | 216 | WP_000510387.1 | hypothetical protein | - |
| C1P67_RS20825 () | 3999632..3999850 | + | 219 | WP_001142588.1 | DUF4014 family protein | - |
| C1P67_RS20830 () | 3999852..4000115 | + | 264 | WP_000224215.1 | hypothetical protein | - |
| C1P67_RS20835 () | 4000126..4000293 | + | 168 | WP_000207997.1 | hypothetical protein | - |
| C1P67_RS20840 () | 4000494..4001722 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| C1P67_RS20845 () | 4001737..4001970 | + | 234 | WP_000350274.1 | hypothetical protein | - |
| - | 4002192..4002250 | - | 59 | - | - | Antitoxin Detail |
| C1P67_RS20850 () | 4002262..4002417 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| C1P67_RS20855 () | 4002634..4002885 | + | 252 | WP_000980988.1 | protein Rem | - |
| C1P67_RS27350 () | 4002952..4003230 | + | 279 | WP_032336987.1 | hypothetical protein | - |
| C1P67_RS20865 () | 4003232..4004278 | + | 1047 | WP_001265101.1 | DUF968 domain-containing protein | - |
| C1P67_RS20870 () | 4004291..4004665 | + | 375 | WP_000904114.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C1P67_RS20875 () | 4004662..4005483 | + | 822 | WP_000762933.1 | antitermination protein | - |
| C1P67_RS20880 () | 4005710..4005950 | + | 241 | Protein_4020 | hypothetical protein | - |
| C1P67_RS20885 () | 4006058..4007116 | + | 1059 | WP_000935541.1 | site-specific DNA-methyltransferase | - |
| C1P67_RS20900 () | 4007406..4007516 | + | 111 | WP_046891796.1 | DUF3927 family protein | - |
| C1P67_RS20905 () | 4007799..4008134 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| C1P67_RS20910 () | 4008394..4010250 | + | 1857 | WP_000874316.1 | SASA family carbohydrate esterase | - |
| C1P67_RS20915 () | 4010397..4011625 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| C1P67_RS20920 () | 4011737..4011952 | + | 216 | WP_000284492.1 | class II holin family protein | - |
| C1P67_RS20925 () | 4011957..4012301 | + | 345 | WP_000193262.1 | YdfR family protein | - |
| C1P67_RS20930 () | 4012267..4012539 | - | 273 | WP_005024131.1 | hypothetical protein | - |
| C1P67_RS20935 () | 4012645..4013178 | + | 534 | WP_000992072.1 | lysozyme | - |
| C1P67_RS26780 () | 4013477..4013944 | + | 468 | WP_001082562.1 | lysis protein | - |
| C1P67_RS20950 () | 4014386..4014934 | + | 549 | WP_000867569.1 | terminase small subunit | - |
| C1P67_RS20955 () | 4014906..4016834 | + | 1929 | WP_024259736.1 | phage terminase large subunit family protein | - |
| C1P67_RS20960 () | 4016818..4017024 | + | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| C1P67_RS20965 () | 4017021..4018613 | + | 1593 | WP_005025184.1 | phage portal protein | - |
| C1P67_RS20970 () | 4018603..4020109 | + | 1507 | Protein_4035 | S49 family peptidase | - |
| C1P67_RS20975 () | 4020146..4020493 | + | 348 | WP_000256833.1 | head decoration protein | - |
| C1P67_RS20980 () | 4020551..4021579 | + | 1029 | WP_000522581.1 | major capsid protein | - |
| C1P67_RS20985 () | 4021631..4022014 | + | 384 | WP_005025174.1 | DNA-packaging protein FI | - |
| C1P67_RS20990 () | 4022007..4022360 | + | 354 | WP_001204570.1 | head-tail joining protein | - |
| C1P67_RS20995 () | 4022376..4022951 | + | 576 | WP_000975010.1 | phage tail protein | - |
| C1P67_RS21000 () | 4022948..4023343 | + | 396 | WP_000683089.1 | phage minor tail U family protein | - |
| C1P67_RS21005 () | 4023351..4024103 | + | 753 | WP_000235118.1 | phage tail protein | - |
| C1P67_RS21010 () | 4024117..4024548 | + | 432 | WP_000479098.1 | phage minor tail protein G | - |
| C1P67_RS21015 () | 4024575..4024988 | + | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| C1P67_RS21020 () | 4024969..4027542 | + | 2574 | WP_000082388.1 | phage tail tape measure protein | - |
| C1P67_RS21025 () | 4027539..4027868 | + | 330 | WP_000847332.1 | phage tail protein | - |
| C1P67_RS21030 () | 4027868..4028566 | + | 699 | WP_001152648.1 | phage minor tail protein L | - |
| C1P67_RS21035 () | 4028571..4029314 | + | 744 | WP_134807494.1 | C40 family peptidase | - |
| C1P67_RS21040 () | 4029251..4029860 | + | 610 | Protein_4049 | tail assembly protein | - |
| C1P67_RS26540 () | 4029933..4030271 | + | 339 | WP_001332187.1 | hypothetical protein | - |
| C1P67_RS21050 () | 4030338..4033817 | + | 3480 | WP_134807495.1 | host specificity protein J | - |
| C1P67_RS21055 () | 4033885..4034484 | + | 600 | WP_001233150.1 | Outer membrane protein X | VF |
| C1P67_RS21060 () | 4034549..4037524 | + | 2976 | WP_134807496.1 | phage tail protein | - |
| C1P67_RS21065 () | 4037536..4038108 | + | 573 | WP_001294928.1 | tail fiber assembly protein | - |
| C1P67_RS21075 () | 4038163..4038831 | - | 669 | WP_134807497.1 | class I SAM-dependent methyltransferase | - |
| C1P67_RS21080 () | 4038888..4039156 | + | 269 | Protein_4056 | tail fiber assembly protein | - |
| C1P67_RS26785 () | 4039271..4039441 | + | 171 | WP_000251936.1 | hypothetical protein | - |
| C1P67_RS21085 () | 4039746..4039871 | + | 126 | Protein_4058 | OmpW family outer membrane protein | - |
| C1P67_RS21090 () | 4039982..4040679 | + | 698 | WP_226342157.1 | IS1 family transposase IS1X2 | Transposase |
| C1P67_RS21095 () | 4040923..4041729 | - | 807 | WP_000443067.1 | tryptophan synthase subunit alpha | - |
| C1P67_RS21100 () | 4041729..4042922 | - | 1194 | WP_000209506.1 | tryptophan synthase subunit beta | - |
| C1P67_RS21105 () | 4042934..4044295 | - | 1362 | WP_000983895.1 | bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|