MGE detailed information
MGE type: IScluster/Tn MGE length: 22898 bp
Accession: NZ_CP026839 Location: 1902390..1925287 Organism: Shigella dysenteriae strain ATCC 9752 Replicon: chromosome
Accession: NZ_CP026839 Location: 1902390..1925287 Organism: Shigella dysenteriae strain ATCC 9752 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P69_RS10155 () | 1898606..1900078 | + | 1473 | WP_134803556.1 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P69_RS10165 () | 1900712..1901428 | - | 717 | WP_000532923.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| C1P69_RS10170 () | 1901771..1902373 | - | 603 | Protein_1834 | AMP nucleosidase | - |
| C1P69_RS10180 () | 1903139..1904000 | - | 862 | Protein_1836 | AMP nucleosidase | - |
| C1P69_RS23495 () | 1904102..1905418 | - | 1317 | Protein_1837 | shikimate transporter | - |
| C1P69_RS10190 () | 1905735..1906373 | + | 639 | Protein_1838 | lipopolysaccharide heptosyltransferase family protein | - |
| C1P69_RS10200 () | 1907603..1907839 | + | 237 | WP_134803557.1 | DNA-binding protein | - |
| C1P69_RS10205 () | 1907836..1908261 | + | 426 | WP_000693847.1 | toxin YdaT family protein | - |
| C1P69_RS10210 () | 1908333..1908674 | + | 342 | WP_171765608.1 | hypothetical protein | - |
| C1P69_RS10215 () | 1908771..1909392 | + | 622 | Protein_1843 | phage replisome organizer | - |
| C1P69_RS10220 () | 1909426..1909848 | + | 423 | WP_001151146.1 | DUF977 family protein | - |
| C1P69_RS10225 () | 1909845..1910150 | + | 306 | WP_134803558.1 | DUF4406 domain-containing protein | - |
| C1P69_RS23500 () | 1910188..1910631 | + | 444 | WP_284526212.1 | ead/Ea22-like family protein | - |
| C1P69_RS10235 () | 1910513..1911725 | - | 1213 | Protein_1847 | IS3 family transposase IS629 | Transposase |
| C1P69_RS10240 () | 1911784..1912041 | + | 258 | Protein_1848 | IS3 family transposase ISSd1 | Transposase |
| - | 1912738..1912796 | - | 59 | - | - | Antitoxin Detail |
| C1P69_RS10255 () | 1912808..1912963 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| C1P69_RS10260 () | 1913131..1913407 | + | 277 | Protein_1850 | hypothetical protein | - |
| C1P69_RS10265 () | 1913409..1914158 | + | 750 | Protein_1851 | hypothetical protein | - |
| C1P69_RS10275 () | 1914208..1914987 | - | 780 | Protein_1852 | IS3 family transposase IS600 | Transposase |
| C1P69_RS10285 () | 1916300..1916676 | - | 377 | Protein_1854 | IS3 family transposase ISSd1 | Transposase |
| C1P69_RS10290 () | 1916742..1916876 | + | 135 | Protein_1855 | DUF1133 family protein | - |
| C1P69_RS10315 () | 1917669..1917851 | + | 183 | WP_134803559.1 | phage holin | - |
| C1P69_RS10320 () | 1917903..1918193 | + | 291 | Protein_1857 | IS3 family transposase IS1203 | Transposase |
| C1P69_RS10325 () | 1918284..1919452 | + | 1169 | WP_094096507.1 | IS3 family transposase ISLad1 | Transposase |
| C1P69_RS10330 () | 1919461..1920875 | - | 1415 | Protein_1859 | E3 ubiquitin-protein ligase ipaH3 | VF |
| C1P69_RS10335 () | 1921191..1921730 | - | 540 | Protein_1860 | class I SAM-dependent methyltransferase | - |
| C1P69_RS10340 () | 1921783..1922996 | + | 1214 | WP_171765609.1 | IS3 family transposase IS629 | Transposase |
| C1P69_RS10345 () | 1923283..1923813 | - | 531 | WP_001079074.1 | cytochrome b | - |
| C1P69_RS10350 () | 1924059..1925287 | + | 1229 | WP_171765610.1 | IS3 family transposase IS2 | Transposase |
| C1P69_RS10355 () | 1925492..1926142 | - | 651 | WP_001007759.1 | metal-binding protein ZinT | - |
| C1P69_RS10360 () | 1926399..1927034 | - | 636 | WP_001240105.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| C1P69_RS10365 () | 1927035..1928038 | - | 1004 | Protein_1866 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| C1P69_RS10370 () | 1928147..1928560 | - | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| C1P69_RS10375 () | 1928693..1929363 | + | 671 | Protein_1868 | response regulator transcription factor HprR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|