MGE detailed information
MGE type: Prophage MGE length: 48219 bp
Accession: NZ_CP026839 Location: 1891603..1939821 Organism: Shigella dysenteriae strain ATCC 9752 Replicon: chromosome
Accession: NZ_CP026839 Location: 1891603..1939821 Organism: Shigella dysenteriae strain ATCC 9752 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P69_RS10080 () | 1887547..1888711 | + | 1165 | Protein_1819 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
| C1P69_RS10085 () | 1888830..1889303 | + | 474 | WP_001105393.1 | DNA gyrase inhibitor SbmC | - |
| C1P69_RS10090 () | 1889501..1890559 | + | 1059 | WP_001200905.1 | FUSC family protein | - |
| C1P69_RS10095 () | 1890731..1891060 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| C1P69_RS10100 () | 1891161..1891385 | - | 225 | WP_000917607.1 | EutP/PduV family microcompartment system protein | - |
| C1P69_RS23490 () | 1891463..1891543 | + | 81 | WP_023441679.1 | hypothetical protein | - |
| C1P69_RS10115 () | 1892342..1893025 | + | 684 | WP_262162387.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| C1P69_RS10120 () | 1893037..1894116 | + | 1080 | WP_001530397.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| C1P69_RS10125 () | 1894178..1895113 | + | 936 | WP_001310930.1 | L,D-transpeptidase | - |
| C1P69_RS10135 () | 1895571..1896488 | + | 918 | WP_001011447.1 | nitrogen assimilation transcriptional regulator NAC | - |
| C1P69_RS10140 () | 1896627..1897324 | + | 698 | WP_284526018.1 | IS1 family transposase IS1R | Transposase |
| C1P69_RS10145 () | 1897367..1898317 | + | 951 | WP_134803555.1 | HTH-type transcriptional regulator Cbl | - |
| C1P69_RS10155 () | 1898606..1900078 | + | 1473 | WP_134803556.1 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P69_RS10165 () | 1900712..1901428 | - | 717 | WP_000532923.1 | putative transcriptional regulatory protein YeeN | VF |
| C1P69_RS10170 () | 1901771..1902373 | - | 603 | Protein_1834 | AMP nucleosidase | - |
| C1P69_RS10180 () | 1903139..1904000 | - | 862 | Protein_1836 | AMP nucleosidase | - |
| C1P69_RS23495 () | 1904102..1905418 | - | 1317 | Protein_1837 | shikimate transporter | - |
| C1P69_RS10190 () | 1905735..1906373 | + | 639 | Protein_1838 | lipopolysaccharide heptosyltransferase family protein | - |
| C1P69_RS10200 () | 1907603..1907839 | + | 237 | WP_134803557.1 | DNA-binding protein | - |
| C1P69_RS10205 () | 1907836..1908261 | + | 426 | WP_000693847.1 | toxin YdaT family protein | - |
| C1P69_RS10210 () | 1908333..1908674 | + | 342 | WP_171765608.1 | hypothetical protein | - |
| C1P69_RS10215 () | 1908771..1909392 | + | 622 | Protein_1843 | phage replisome organizer | - |
| C1P69_RS10220 () | 1909426..1909848 | + | 423 | WP_001151146.1 | DUF977 family protein | - |
| C1P69_RS10225 () | 1909845..1910150 | + | 306 | WP_134803558.1 | DUF4406 domain-containing protein | - |
| C1P69_RS23500 () | 1910188..1910631 | + | 444 | WP_284526212.1 | ead/Ea22-like family protein | - |
| C1P69_RS10235 () | 1910513..1911725 | - | 1213 | Protein_1847 | IS3 family transposase IS629 | Transposase |
| C1P69_RS10240 () | 1911784..1912041 | + | 258 | Protein_1848 | IS3 family transposase ISSd1 | Transposase |
| - | 1912738..1912796 | - | 59 | - | - | Antitoxin Detail |
| C1P69_RS10255 () | 1912808..1912963 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| C1P69_RS10260 () | 1913131..1913407 | + | 277 | Protein_1850 | hypothetical protein | - |
| C1P69_RS10265 () | 1913409..1914158 | + | 750 | Protein_1851 | hypothetical protein | - |
| C1P69_RS10275 () | 1914208..1914987 | - | 780 | Protein_1852 | IS3 family transposase IS600 | Transposase |
| C1P69_RS10285 () | 1916300..1916676 | - | 377 | Protein_1854 | IS3 family transposase ISSd1 | Transposase |
| C1P69_RS10290 () | 1916742..1916876 | + | 135 | Protein_1855 | DUF1133 family protein | - |
| C1P69_RS10315 () | 1917669..1917851 | + | 183 | WP_134803559.1 | phage holin | - |
| C1P69_RS10320 () | 1917903..1918193 | + | 291 | Protein_1857 | IS3 family transposase IS1203 | Transposase |
| C1P69_RS10325 () | 1918284..1919452 | + | 1169 | WP_094096507.1 | IS3 family transposase ISLad1 | Transposase |
| C1P69_RS10330 () | 1919461..1920875 | - | 1415 | Protein_1859 | E3 ubiquitin-protein ligase ipaH3 | VF |
| C1P69_RS10335 () | 1921191..1921730 | - | 540 | Protein_1860 | class I SAM-dependent methyltransferase | - |
| C1P69_RS10340 () | 1921783..1922996 | + | 1214 | WP_171765609.1 | IS3 family transposase IS629 | Transposase |
| C1P69_RS10345 () | 1923283..1923813 | - | 531 | WP_001079074.1 | cytochrome b | - |
| C1P69_RS10350 () | 1924059..1925287 | + | 1229 | WP_171765610.1 | IS3 family transposase IS2 | Transposase |
| C1P69_RS10355 () | 1925492..1926142 | - | 651 | WP_001007759.1 | metal-binding protein ZinT | - |
| C1P69_RS10360 () | 1926399..1927034 | - | 636 | WP_001240105.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| C1P69_RS10365 () | 1927035..1928038 | - | 1004 | Protein_1866 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| C1P69_RS10370 () | 1928147..1928560 | - | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| C1P69_RS10375 () | 1928693..1929363 | + | 671 | Protein_1868 | putative transcriptional regulatory protein YedW | VF |
| C1P69_RS10380 () | 1929363..1930721 | + | 1359 | WP_000826745.1 | two-component system sensor histidine kinase HprS | - |
| C1P69_RS10385 () | 1930829..1931680 | - | 852 | WP_000218204.1 | protein deglycase HchA | - |
| C1P69_RS10390 () | 1931827..1932111 | + | 285 | WP_158252686.1 | hypothetical protein | - |
| C1P69_RS10395 () | 1932163..1933376 | + | 1214 | WP_134810244.1 | IS3 family transposase IS629 | Transposase |
| C1P69_RS10405 () | 1934362..1934859 | - | 498 | Protein_1874 | porin | - |
| C1P69_RS10410 () | 1934953..1936181 | + | 1229 | WP_171765611.1 | IS3 family transposase IS2 | Transposase |
| C1P69_RS10415 () | 1936211..1936672 | - | 462 | Protein_1876 | porin | - |
| C1P69_RS10420 () | 1937323..1937603 | + | 281 | Protein_1877 | cell division protein DrpB | - |
| C1P69_RS10425 () | 1937643..1938336 | + | 694 | Protein_1878 | phosphohydrolase | - |
| C1P69_RS10430 () | 1938403..1939821 | + | 1419 | WP_001157236.1 | DNA-cytosine methyltransferase | - |
| C1P69_RS10435 () | 1939802..1940272 | + | 471 | WP_000786008.1 | VSPR family DNA mismatch endonuclease | - |
| C1P69_RS10440 () | 1940261..1941178 | - | 918 | Protein_1881 | drug/metabolite exporter YedA | - |
| C1P69_RS10445 () | 1941351..1942267 | + | 917 | Protein_1882 | DUF808 domain-containing protein | - |
| C1P69_RS10450 () | 1942346..1942527 | + | 182 | Protein_1883 | DUF2158 domain-containing protein | - |
| C1P69_RS10455 () | 1942698..1944392 | + | 1695 | WP_134803564.1 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
| C1P69_RS23505 () | 1944389..1944463 | - | 75 | Protein_1885 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|