MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 103367 bp
Accession: NZ_CP026838 Location: 1..103367 Organism: Shigella dysenteriae strain ATCC 9752 Replicon: plasmid unnamed
Accession: NZ_CP026838 Location: 1..103367 Organism: Shigella dysenteriae strain ATCC 9752 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P69_RS00010 | 518..1460 | - | 943 | Protein_1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| C1P69_RS00015 | 1525..2473 | - | 949 | Protein_2 | virulence factor VirK | - |
| C1P69_RS00020 | 2478..3566 | - | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| C1P69_RS00025 | 3569..4358 | - | 790 | Protein_4 | polysaccharide deacetylase family protein | - |
| C1P69_RS00030 | 4890..7753 | + | 2864 | Protein_5 | ankyrin repeat domain-containing protein | - |
| C1P69_RS00035 | 7783..8106 | - | 324 | Protein_6 | IS3 family transposase | - |
| C1P69_RS22895 | 8104..8292 | + | 189 | Protein_7 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P69_RS00050 | 8751..10352 | - | 1602 | WP_134803082.1 | IS66-like element ISEc49 family transposase | - |
| C1P69_RS00055 | 10359..10751 | - | 393 | WP_134803083.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P69_RS00060 | 10738..10851 | - | 114 | Protein_10 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P69_RS00065 | 10928..12096 | + | 1169 | WP_094096507.1 | IS3-like element IS911 family transposase | - |
| C1P69_RS00070 | 12089..12475 | + | 387 | Protein_12 | IS66 family transposase | - |
| C1P69_RS00075 | 12538..13694 | + | 1157 | WP_134803084.1 | IS3-like element IS600 family transposase | - |
| C1P69_RS00080 | 13737..14321 | + | 585 | Protein_14 | IS66 family transposase | - |
| C1P69_RS00085 | 14457..16153 | - | 1697 | Protein_15 | type III secretion system effector OspD3 | - |
| C1P69_RS00090 | 16229..16376 | + | 148 | Protein_16 | IS1 family transposase | - |
| C1P69_RS00095 | 16480..17892 | - | 1413 | WP_001026856.1 | type 3 secretion system effector OspC1 | - |
| C1P69_RS00100 | 18343..18405 | + | 63 | Protein_18 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P69_RS00105 | 18426..18647 | - | 222 | Protein_19 | transposase | - |
| C1P69_RS23225 | 18790..18984 | - | 195 | Protein_20 | HNH endonuclease signature motif containing protein | - |
| C1P69_RS23230 | 19038..19226 | + | 189 | Protein_21 | IS91 family transposase | - |
| C1P69_RS00120 | 19599..20774 | - | 1176 | WP_134803085.1 | enterotoxin production-related protein TieB | - |
| C1P69_RS00130 | 20843..23104 | - | 2262 | WP_134803086.1 | TonB-dependent receptor | - |
| C1P69_RS00135 | 23273..24049 | - | 777 | WP_000981089.1 | energy transducer TonB | - |
| C1P69_RS00140 | 24057..24932 | - | 876 | WP_134803087.1 | ChaN family lipoprotein | - |
| C1P69_RS00145 | 25209..25424 | + | 216 | Protein_26 | IS91 family transposase | - |
| C1P69_RS00150 | 25491..26834 | + | 1344 | Protein_27 | IS4 family transposase | - |
| C1P69_RS00155 | 26848..27138 | + | 291 | Protein_28 | IS91 family transposase | - |
| C1P69_RS23235 | 27311..27424 | - | 114 | Protein_29 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C1P69_RS00160 | 27402..27484 | - | 83 | Protein_30 | CopG family transcriptional regulator | - |
| C1P69_RS00165 | 27514..27909 | - | 396 | WP_000174726.1 | Tn3 family transposase | - |
| C1P69_RS00170 | 27928..28293 | + | 366 | WP_000124126.1 | hypothetical protein | - |
| C1P69_RS00175 | 28293..29480 | + | 1188 | WP_134803088.1 | IS91 family transposase | - |
| C1P69_RS00185 | 30018..30305 | - | 288 | WP_000865087.1 | helix-turn-helix transcriptional regulator | - |
| C1P69_RS00190 | 30305..30616 | - | 312 | WP_000483533.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C1P69_RS00195 | 31080..32276 | + | 1197 | WP_134803089.1 | IS110-like element ISEc20 family transposase | - |
| C1P69_RS00200 | 32645..32911 | - | 267 | WP_000957713.1 | type 3 secretion system effector OspE2 | - |
| C1P69_RS00205 | 33093..33311 | - | 219 | Protein_38 | integrase core domain-containing protein | - |
| C1P69_RS00210 | 33384..33641 | + | 258 | Protein_39 | IS3 family transposase | - |
| C1P69_RS00220 | 34995..35888 | + | 894 | Protein_41 | IS3-like element IS911 family transposase | - |
| C1P69_RS00225 | 36065..37278 | + | 1214 | WP_171765583.1 | IS3 family transposase | - |
| C1P69_RS00230 | 37320..37544 | + | 225 | Protein_43 | IS3 family transposase | - |
| C1P69_RS00235 | 37650..37928 | - | 279 | Protein_44 | transposase zinc-binding domain-containing protein | - |
| C1P69_RS22900 | 37938..38113 | - | 176 | Protein_45 | hypothetical protein | - |
| C1P69_RS00240 | 38259..38414 | + | 156 | Protein_46 | IS256 family transposase | - |
| C1P69_RS00245 | 38444..40171 | - | 1728 | WP_134802530.1 | T3SS effector E3 ubiquitin-protein ligase IpaH1.4 | - |
| C1P69_RS00250 | 40560..40828 | - | 269 | Protein_48 | hypothetical protein | - |
| C1P69_RS00255 | 40937..41106 | - | 170 | Protein_49 | IS1 family transposase | - |
| C1P69_RS00260 | 41667..42189 | + | 523 | Protein_50 | IS3-like element ISSfl11 family transposase | - |
| C1P69_RS00265 | 42232..43441 | - | 1210 | Protein_51 | IS3 family transposase | - |
| C1P69_RS00270 | 43479..44642 | + | 1164 | WP_134803091.1 | IS91-like element ISSbo1 family transposase | - |
| C1P69_RS00280 | 44819..45663 | + | 845 | Protein_53 | IS5-like element ISSfl7 family transposase | - |
| C1P69_RS00285 | 45778..46809 | + | 1032 | WP_004998488.1 | IS630-like element IS630 family transposase | - |
| C1P69_RS23240 | 46832..46924 | - | 93 | Protein_55 | hypothetical protein | - |
| C1P69_RS00295 | 47003..47693 | + | 691 | Protein_56 | IS1 family transposase | - |
| C1P69_RS00300 | 47710..47889 | - | 180 | Protein_57 | transposase | - |
| C1P69_RS00305 | 48218..49915 | + | 1698 | WP_134803093.1 | T3SS effector E3 ubiquitin-protein ligase IpaH7.8 | - |
| C1P69_RS00310 | 50343..52067 | + | 1725 | WP_012421703.1 | T3SS effector E3 ubiquitin-protein ligase IpaH4.5 | - |
| C1P69_RS00315 | 52119..53327 | + | 1209 | Protein_60 | IS3 family transposase | - |
| C1P69_RS00320 | 53364..53543 | + | 180 | Protein_61 | transposase | - |
| C1P69_RS23245 | 53860..54197 | - | 338 | Protein_62 | hypothetical protein | - |
| C1P69_RS00330 | 54104..55246 | + | 1143 | Protein_63 | group II intron reverse transcriptase/maturase | - |
| C1P69_RS00335 | 55329..55508 | + | 180 | Protein_64 | transposase domain-containing protein | - |
| C1P69_RS00340 | 55535..56020 | - | 486 | WP_000003223.1 | IS110 family transposase | - |
| C1P69_RS00345 | 56276..57256 | - | 981 | WP_000431558.1 | ParB family protein | - |
| C1P69_RS00350 | 57256..58455 | - | 1200 | WP_000200287.1 | AAA family ATPase | - |
| C1P69_RS23250 | 58629..58763 | - | 135 | Protein_68 | hypothetical protein | - |
| C1P69_RS00360 | 58777..59114 | - | 338 | Protein_69 | IS1 family transposase | - |
| C1P69_RS00365 | 59181..59963 | - | 783 | WP_077633117.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| C1P69_RS00370 | 59960..60981 | - | 1022 | Protein_71 | IS21 family transposase | - |
| C1P69_RS00380 | 61068..61429 | - | 362 | Protein_72 | IS1 family transposase | - |
| C1P69_RS00385 | 61769..62323 | - | 555 | Protein_73 | IS3-like element IS3H family transposase | - |
| C1P69_RS00390 | 62466..62588 | + | 123 | Protein_74 | transposase domain-containing protein | - |
| C1P69_RS00400 | 62850..63416 | - | 567 | WP_000901798.1 | type III secretion effector IpgB2 | - |
| C1P69_RS22910 | 63697..64011 | - | 315 | WP_011114726.1 | hypothetical protein | - |
| C1P69_RS22695 | 64089..64199 | - | 111 | Protein_77 | IS3 family transposase | - |
| C1P69_RS22915 | 64523..65199 | - | 677 | Protein_78 | type 3 secretion system effector/anti-activator OspD1 | - |
| C1P69_RS00425 | 65569..65706 | - | 138 | Protein_79 | IS630 family transposase | - |
| C1P69_RS00430 | 65788..66086 | - | 299 | Protein_80 | transposase | - |
| C1P69_RS00435 | 66675..66834 | - | 160 | Protein_81 | IS3 family transposase | - |
| C1P69_RS00440 | 66838..67992 | - | 1155 | Protein_82 | IS66 family transposase | - |
| C1P69_RS00445 | 68012..68359 | - | 348 | WP_134803096.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P69_RS00450 | 68359..68735 | - | 377 | Protein_84 | IS66-like element accessory protein TnpA | - |
| C1P69_RS00455 | 68802..70148 | + | 1347 | WP_171765584.1 | IS4-like element IS4 family transposase | - |
| C1P69_RS22920 | 70162..70443 | - | 282 | Protein_86 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P69_RS00465 | 70606..70791 | + | 186 | WP_005008511.1 | hypothetical protein | - |
| C1P69_RS00470 | 70839..71268 | + | 430 | Protein_88 | transposase | - |
| C1P69_RS00475 | 71454..71691 | + | 238 | Protein_89 | ATP-binding protein | - |
| C1P69_RS23260 | 71805..72063 | + | 259 | Protein_90 | integrase core domain-containing protein | - |
| C1P69_RS00480 | 72112..72690 | + | 579 | WP_134803098.1 | hypothetical protein | - |
| C1P69_RS00485 | 72799..73057 | - | 259 | Protein_92 | IS1 family transposase | - |
| C1P69_RS00490 | 73041..73604 | + | 564 | Protein_93 | transposase | - |
| C1P69_RS00495 | 73729..74448 | + | 720 | WP_001121865.1 | type III secretion system effector phosphothreonine lyase | - |
| C1P69_RS00505 | 75775..76113 | + | 339 | Protein_96 | integrase core domain-containing protein | - |
| C1P69_RS00510 | 76156..76679 | - | 524 | Protein_97 | IS3-like element ISSfl11 family transposase | - |
| C1P69_RS00515 | 76747..77229 | - | 483 | WP_000405248.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C1P69_RS00520 | 77220..77522 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C1P69_RS00530 | 77794..78066 | + | 273 | WP_134803100.1 | hypothetical protein | - |
| C1P69_RS00535 | 78047..78349 | + | 303 | Protein_101 | transposase zinc-binding domain-containing protein | - |
| C1P69_RS00540 | 78388..79601 | - | 1214 | Protein_102 | IS3 family transposase | - |
| C1P69_RS00545 | 79630..80565 | + | 936 | Protein_103 | IS91 family transposase | - |
| C1P69_RS22705 | 80731..80865 | + | 135 | Protein_104 | IS5 family transposase | - |
| C1P69_RS00560 | 81014..82468 | - | 1455 | WP_000701110.1 | type 3 secretion system effector OspC2 | - |
| C1P69_RS00565 | 82936..83779 | + | 844 | Protein_106 | IS5 family transposase | - |
| C1P69_RS23265 | 83874..83951 | + | 78 | Protein_107 | hypothetical protein | - |
| C1P69_RS00570 | 84024..84305 | - | 282 | Protein_108 | transposase domain-containing protein | - |
| C1P69_RS00575 | 84410..84619 | + | 210 | Protein_109 | transposase | - |
| C1P69_RS22925 | 84721..84935 | + | 215 | Protein_110 | hypothetical protein | - |
| C1P69_RS00585 | 84905..86104 | + | 1200 | WP_134803103.1 | IS91-like element ISSbo1 family transposase | - |
| C1P69_RS00590 | 86276..86599 | + | 324 | Protein_112 | transposase | - |
| C1P69_RS00600 | 87584..88438 | - | 855 | Protein_113 | incFII family plasmid replication initiator RepA | - |
| C1P69_RS00605 | 88431..88505 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C1P69_RS00615 | 88729..88989 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| C1P69_RS23270 | 89229..89300 | - | 72 | Protein_116 | hypothetical protein | - |
| C1P69_RS23800 | 89343..89477 | - | 135 | WP_284699270.1 | hypothetical protein | - |
| C1P69_RS00630 | 90727..91823 | - | 1097 | Protein_119 | IS3 family transposase | - |
| C1P69_RS00635 | 91849..92397 | - | 549 | WP_134803107.1 | DUF2726 domain-containing protein | - |
| C1P69_RS00640 | 92436..92645 | - | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| C1P69_RS00645 | 92691..93152 | - | 462 | WP_134803108.1 | thermonuclease family protein | - |
| C1P69_RS00655 | 93395..93607 | - | 213 | WP_011379083.1 | ANR family transcriptional regulator | - |
| C1P69_RS00660 | 93738..94298 | - | 561 | WP_134803109.1 | fertility inhibition protein FinO | - |
| C1P69_RS00665 | 94353..95099 | - | 747 | WP_000205722.1 | conjugal transfer pilus acetylase TraX | - |
| C1P69_RS00670 | 95119..100395 | - | 5277 | WP_284526014.1 | conjugative transfer relaxase/helicase TraI | - |
| C1P69_RS00675 | 100477..100704 | + | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | - |
| C1P69_RS00680 | 100704..101101 | + | 398 | Protein_128 | tRNA(fMet)-specific endonuclease VapC | - |
| C1P69_RS00685 | 101110..103092 | - | 1983 | Protein_129 | type IV conjugative transfer system coupling protein TraD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|