MGE detailed information
MGE type: Genomic_island MGE length: 23692 bp
Accession: NZ_CP026836 Location: 384250..407941 Organism: Shigella boydii strain ATCC 49812 Replicon: chromosome
Accession: NZ_CP026836 Location: 384250..407941 Organism: Shigella boydii strain ATCC 49812 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P56_RS01960 (379453) | 379453..379509 | + | 57 | WP_012767742.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - (379411) | 379411..379546 | - | 136 | NuclAT_9 | - | - |
| - (379411) | 379411..379546 | - | 136 | NuclAT_9 | - | - |
| - (379411) | 379411..379546 | - | 136 | NuclAT_9 | - | - |
| - (379411) | 379411..379546 | - | 136 | NuclAT_9 | - | - |
| C1P56_RS01965 (379846) | 379846..380918 | - | 1073 | Protein_383 | tyrosine-type recombinase/integrase | - |
| C1P56_RS01975 (380896) | 380896..381114 | - | 219 | WP_001303849.1 | excisionase | - |
| C1P56_RS01980 (381199) | 381199..381855 | - | 657 | WP_000235316.1 | ORF6N domain-containing protein | - |
| C1P56_RS01985 (382181) | 382181..382558 | - | 378 | Protein_386 | ORF6N domain-containing protein | - |
| C1P56_RS01990 (382578) | 382578..383598 | - | 1021 | Protein_387 | IS630 family transposase | - |
| C1P56_RS01995 (383745) | 383745..384107 | - | 363 | Protein_388 | ORF6N domain-containing protein | - |
| C1P56_RS02000 (384250) | 384250..384492 | - | 243 | WP_000457738.1 | DUF4222 domain-containing protein | - |
| C1P56_RS02010 (384577) | 384577..384972 | - | 396 | WP_004976379.1 | hypothetical protein | - |
| C1P56_RS02015 (385023) | 385023..386155 | - | 1133 | Protein_391 | IS3 family transposase IS2 | Transposase |
| C1P56_RS02020 (386209) | 386209..387418 | + | 1210 | Protein_392 | IS3 family transposase IS629 | Transposase |
| C1P56_RS02025 (387459) | 387459..387605 | - | 147 | Protein_393 | IS3 family transposase IS2 | Transposase |
| C1P56_RS02030 (387636) | 387636..388199 | - | 564 | WP_134796283.1 | ead/Ea22-like family protein | - |
| C1P56_RS02035 (388196) | 388196..388363 | - | 168 | WP_001214453.1 | DUF2737 family protein | - |
| C1P56_RS02040 (388374) | 388374..388499 | - | 126 | Protein_396 | DUF2856 family protein | - |
| C1P56_RS02045 (388564) | 388564..389720 | + | 1157 | WP_134796284.1 | IS3 family transposase ISSd1 | Transposase |
| C1P56_RS02050 (389717) | 389717..391223 | - | 1507 | Protein_398 | DEAD/DEAH box helicase | - |
| C1P56_RS28120 (391356) | 391356..391592 | - | 237 | WP_241560003.1 | hypothetical protein | - |
| C1P56_RS28125 (391814) | 391814..392071 | - | 258 | WP_032333659.1 | hypothetical protein | - |
| C1P56_RS02065 (392118) | 392118..392357 | - | 240 | WP_000171144.1 | helix-turn-helix transcriptional regulator | - |
| C1P56_RS02070 (392463) | 392463..393182 | + | 720 | WP_000162429.1 | LexA family transcriptional regulator | - |
| C1P56_RS27640 (393304) | 393304..393474 | + | 171 | WP_164834428.1 | hypothetical protein | - |
| C1P56_RS02075 (393589) | 393589..393933 | - | 345 | WP_001016018.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| C1P56_RS02080 (393930) | 393930..394178 | - | 249 | WP_000513533.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C1P56_RS02085 (394834) | 394834..395725 | + | 892 | Protein_406 | Rha family transcriptional regulator | - |
| C1P56_RS02090 (395796) | 395796..396008 | + | 213 | WP_000917251.1 | hypothetical protein | - |
| C1P56_RS02095 (396020) | 396020..396301 | + | 282 | WP_000934194.1 | hypothetical protein | - |
| C1P56_RS02100 (396322) | 396322..396603 | + | 282 | Protein_409 | host nuclease inhibitor GamL | - |
| C1P56_RS02105 (396621) | 396621..397220 | + | 600 | Protein_410 | recombinase RecT | - |
| C1P56_RS02110 (397285) | 397285..398441 | + | 1157 | WP_134796284.1 | IS3 family transposase ISSd1 | Transposase |
| C1P56_RS02120 (398835) | 398835..399524 | + | 690 | WP_000187062.1 | YqaJ viral recombinase family protein | - |
| C1P56_RS02125 (399524) | 399524..400110 | + | 587 | Protein_413 | DUF669 domain-containing protein | - |
| C1P56_RS02130 (400135) | 400135..400206 | + | 72 | Protein_414 | DUF2856 family protein | - |
| C1P56_RS02140 (401374) | 401374..402039 | - | 666 | WP_284542160.1 | transposase | - |
| C1P56_RS02145 (402503) | 402503..402826 | - | 324 | WP_128869120.1 | hypothetical protein | - |
| C1P56_RS02150 (402985) | 402985..403272 | - | 288 | WP_000805963.1 | HNH endonuclease | - |
| C1P56_RS02155 (403269) | 403269..403448 | - | 180 | WP_001376843.1 | hypothetical protein | - |
| C1P56_RS02160 (403484) | 403484..403762 | - | 279 | WP_119172707.1 | hypothetical protein | - |
| C1P56_RS02165 (403764) | 403764..404318 | - | 555 | WP_119172706.1 | hypothetical protein | - |
| C1P56_RS02175 (405276) | 405276..405929 | - | 654 | WP_134796285.1 | DNA N-6-adenine-methyltransferase | - |
| C1P56_RS02180 (406266) | 406266..406814 | - | 549 | WP_119172444.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| C1P56_RS02185 (407768) | 407768..407941 | + | 174 | WP_001273658.1 | general stress protein | - |
| C1P56_RS02190 (408199) | 408199..409527 | - | 1329 | WP_134796286.1 | pyrimidine utilization transport protein G | - |
| C1P56_RS02195 (409548) | 409548..410042 | - | 495 | WP_001028095.1 | pyrimidine utilization flavin reductase protein F | - |
| C1P56_RS02200 (410053) | 410053..410643 | - | 591 | WP_001001110.1 | malonic semialdehyde reductase | - |
| C1P56_RS02205 (410653) | 410653..411453 | - | 801 | WP_119172445.1 | pyrimidine utilization protein D | - |
| C1P56_RS02210 (411461) | 411461..411847 | - | 387 | WP_001126789.1 | 3-aminoacrylate deaminase | - |
| C1P56_RS02215 (411859) | 411859..412551 | - | 693 | WP_119172448.1 | peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|