MGE detailed information
MGE type: Prophage MGE length: 33519 bp
Accession: NZ_CP026836 Location: 254832..288350 Organism: Shigella boydii strain ATCC 49812 Replicon: chromosome
Accession: NZ_CP026836 Location: 254832..288350 Organism: Shigella boydii strain ATCC 49812 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P56_RS01240 (250721) | 250721..252154 | + | 1434 | WP_119172575.1 | anion permease | - |
| C1P56_RS01245 (252337) | 252337..254598 | + | 2262 | WP_119172576.1 | hydratase | - |
| C1P56_RS01250 (254832) | 254832..256115 | - | 1284 | WP_119172577.1 | putative acyl-CoA thioester hydrolase | - |
| C1P56_RS01255 (256250) | 256250..256588 | - | 339 | Protein_246 | hypothetical protein ; Integrase | Integrase |
| C1P56_RS01265 (257875) | 257875..258033 | - | 159 | WP_000682559.1 | DUF1317 family protein | - |
| C1P56_RS01270 (258030) | 258030..258710 | - | 681 | WP_134796267.1 | YqaJ viral recombinase family protein | - |
| C1P56_RS01275 (258707) | 258707..259492 | - | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| C1P56_RS01280 (259498) | 259498..259794 | - | 297 | WP_020241285.1 | host-nuclease inhibitor Gam family protein | - |
| C1P56_RS01290 (259870) | 259870..260013 | - | 144 | WP_038341317.1 | host cell division inhibitory peptide Kil | - |
| C1P56_RS01295 (260006) | 260006..260146 | - | 141 | WP_001198866.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| C1P56_RS01300 (260252) | 260252..260875 | - | 624 | WP_134796268.1 | Nmad5 family putative nucleotide modification protein | - |
| C1P56_RS01305 (260937) | 260937..261320 | - | 384 | WP_000198445.1 | hypothetical protein | - |
| C1P56_RS28075 (261817) | 261817..261951 | - | 135 | WP_000929756.1 | hypothetical protein | - |
| C1P56_RS28080 (262125) | 262125..262658 | - | 534 | WP_001193679.1 | hypothetical protein | - |
| C1P56_RS01315 (262848) | 262848..263189 | - | 342 | WP_134796269.1 | DUF3024 domain-containing protein | - |
| C1P56_RS01320 (263227) | 263227..263934 | - | 708 | WP_000846391.1 | helix-turn-helix transcriptional regulator | - |
| C1P56_RS01325 (264046) | 264046..264270 | + | 225 | WP_024196828.1 | helix-turn-helix domain-containing protein | - |
| C1P56_RS01330 (264409) | 264409..264708 | + | 300 | WP_000438538.1 | CII family transcriptional regulator | - |
| C1P56_RS01335 (264731) | 264731..265003 | + | 273 | WP_001244621.1 | hypothetical protein | - |
| C1P56_RS01340 (265066) | 265066..265890 | + | 825 | WP_284542140.1 | replication protein | - |
| C1P56_RS01345 (265880) | 265880..266548 | + | 669 | Protein_264 | DnaB-like helicase N-terminal domain-containing protein | - |
| C1P56_RS01355 (268845) | 268845..269612 | + | 768 | Protein_266 | DnaB-like helicase C-terminal domain-containing protein | - |
| C1P56_RS01360 (269686) | 269686..269964 | + | 279 | WP_134796271.1 | hypothetical protein | - |
| C1P56_RS01365 (269961) | 269961..270371 | + | 411 | WP_000814621.1 | recombination protein NinB | - |
| C1P56_RS01370 (270368) | 270368..270544 | + | 177 | WP_001254220.1 | NinE family protein | - |
| C1P56_RS01375 (270586) | 270586..270894 | - | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| C1P56_RS01380 (270884) | 270884..271213 | - | 330 | WP_024258354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P56_RS01390 (271535) | 271535..272212 | + | 678 | WP_119172668.1 | P22AR C-terminal domain-containing protein | - |
| C1P56_RS01395 (272287) | 272287..273009 | + | 723 | WP_001004003.1 | DNA-binding protein | - |
| C1P56_RS01400 (273047) | 273047..273556 | + | 510 | WP_119172665.1 | NUMOD4 motif-containing HNH endonuclease | - |
| C1P56_RS28085 (273589) | 273589..273810 | + | 222 | WP_134796716.1 | hypothetical protein | - |
| C1P56_RS01415 (275072) | 275072..275977 | + | 906 | Protein_277 | IS66 family transposase ISSfl3 | Transposase |
| C1P56_RS01425 (276229) | 276229..277098 | + | 870 | WP_119172674.1 | hypothetical protein | - |
| C1P56_RS01430 (277079) | 277079..277756 | + | 678 | WP_000068498.1 | Gp138 family membrane-puncturing spike protein | - |
| C1P56_RS01435 (277769) | 277769..278125 | + | 357 | WP_001191864.1 | hypothetical protein | - |
| C1P56_RS01440 (278122) | 278122..279363 | + | 1242 | WP_134796272.1 | baseplate J/gp47 family protein | - |
| C1P56_RS01445 (279365) | 279365..279970 | + | 606 | WP_001181759.1 | DUF2612 domain-containing protein | - |
| C1P56_RS28090 (279957) | 279957..280124 | + | 168 | Protein_283 | phage tail protein | - |
| C1P56_RS01455 (280145) | 280145..281341 | - | 1197 | WP_000140459.1 | IS110 family transposase ISEc20 | Transposase |
| C1P56_RS27615 (282286) | 282286..282807 | + | 522 | WP_071779508.1 | phage tail protein | - |
| C1P56_RS01465 (282810) | 282810..283355 | + | 546 | WP_000902888.1 | tail fiber assembly protein | - |
| C1P56_RS01470 (283379) | 283379..284643 | + | 1265 | Protein_287 | prophage tail fiber N-terminal domain-containing protein | - |
| C1P56_RS01475 (284594) | 284594..285217 | + | 624 | WP_134796264.1 | DUF4376 domain-containing protein | - |
| C1P56_RS01485 (285397) | 285397..287040 | - | 1644 | WP_134796274.1 | hypothetical protein | VF |
| C1P56_RS01490 (287356) | 287356..288024 | - | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| C1P56_RS01495 (288081) | 288081..288350 | + | 270 | WP_000937487.1 | tail fiber assembly protein | - |
| C1P56_RS01500 (288455) | 288455..288703 | - | 249 | WP_001261936.1 | DinI-like family protein | - |
| C1P56_RS01510 (289218) | 289218..290903 | + | 1686 | WP_004979528.1 | two-component regulatory system sensor histidine kinase BtsS | - |
| C1P56_RS01515 (290900) | 290900..291619 | + | 720 | WP_000598641.1 | two-component system response regulator BtsR | - |
| C1P56_RS01520 (291666) | 291666..292136 | + | 471 | WP_119171800.1 | DUF1456 family protein | - |
| C1P56_RS01525 (292177) | 292177..292638 | - | 462 | WP_004991169.1 | YehR family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|