MGE detailed information
MGE type: IScluster/Tn MGE length: 9516 bp
Accession: NZ_CP026836 Location: 2535685..2545200 Organism: Shigella boydii strain ATCC 49812 Replicon: chromosome
Accession: NZ_CP026836 Location: 2535685..2545200 Organism: Shigella boydii strain ATCC 49812 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P56_RS13355 () | 2532502..2533854 | - | 1353 | WP_004973152.1 | sigma E protease regulator RseP | - |
| C1P56_RS13360 () | 2533866..2534723 | - | 858 | WP_000922456.1 | phosphatidate cytidylyltransferase | - |
| C1P56_RS13365 () | 2534736..2535494 | - | 759 | WP_004996908.1 | (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | - |
| C1P56_RS13370 () | 2535685..2537031 | - | 1347 | WP_004969946.1 | IS4-like element IS4 family transposase | - |
| C1P56_RS13375 () | 2537098..2537475 | + | 378 | Protein_2603 | IS66-like element accessory protein TnpA | - |
| C1P56_RS13380 () | 2537475..2537822 | + | 348 | WP_000622995.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P56_RS13385 () | 2537886..2538128 | + | 243 | Protein_2605 | transposase | - |
| C1P56_RS28510 () | 2538112..2538210 | + | 99 | Protein_2606 | IS66 family insertion sequence element accessory protein TnpB | - |
| - () | 2538396..2538609 | + | 214 | NuclAT_8 | - | Antitoxin Detail |
| - () | 2538396..2538609 | + | 214 | NuclAT_8 | - | Antitoxin Detail |
| - () | 2538396..2538609 | + | 214 | NuclAT_8 | - | Antitoxin Detail |
| - () | 2538396..2538609 | + | 214 | NuclAT_8 | - | Antitoxin Detail |
| - | 2538399..2538609 | - | 211 | - | - | Antitoxin Detail |
| C1P56_RS28515 () | 2538597..2538749 | + | 153 | Protein_2607 | DUF5431 family protein | - |
| C1P56_RS13400 () | 2538694..2538816 | + | 123 | WP_223200913.1 | Hok/Gef family protein | Toxin Detail |
| C1P56_RS27870 () | 2538909..2539073 | + | 165 | WP_004989787.1 | hypothetical protein | - |
| C1P56_RS13410 () | 2540871..2541005 | - | 135 | Protein_2611 | transposase | - |
| C1P56_RS28520 () | 2541005..2541109 | - | 105 | WP_075288148.1 | transposase domain-containing protein | - |
| C1P56_RS28525 () | 2541131..2541625 | - | 495 | Protein_2613 | IS66 family transposase | - |
| C1P56_RS28530 () | 2541565..2542464 | - | 900 | WP_284542724.1 | IS66 family transposase | - |
| C1P56_RS13420 () | 2542631..2542978 | - | 348 | WP_000631709.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C1P56_RS13425 () | 2542975..2543649 | - | 675 | WP_001088287.1 | IS66-like element accessory protein TnpA | - |
| C1P56_RS13430 () | 2543854..2545200 | + | 1347 | WP_004969946.1 | IS4-like element IS4 family transposase | - |
| C1P56_RS13435 () | 2545238..2546434 | - | 1197 | WP_119172510.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| C1P56_RS13440 () | 2546526..2547083 | - | 558 | WP_000622418.1 | ribosome recycling factor | - |
| C1P56_RS13445 () | 2547375..2548099 | - | 725 | Protein_2620 | UMP kinase | - |
| C1P56_RS13450 () | 2548246..2549097 | - | 852 | WP_000818114.1 | translation elongation factor Ts | - |
| C1P56_RS13455 () | 2549355..2550080 | - | 726 | WP_000246882.1 | 30S ribosomal protein S2 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|