MGE detailed information
MGE type: Genomic_island MGE length: 18927 bp
Accession: NZ_CP026836 Location: 2320262..2339188 Organism: Shigella boydii strain ATCC 49812 Replicon: chromosome
Accession: NZ_CP026836 Location: 2320262..2339188 Organism: Shigella boydii strain ATCC 49812 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P56_RS12305 (2315411) | 2315411..2315788 | - | 378 | WP_001188905.1 | DUF454 family protein | - |
| C1P56_RS12310 (2315858) | 2315858..2316385 | + | 528 | WP_000844845.1 | primosomal replication protein N'' | - |
| C1P56_RS12315 (2316399) | 2316399..2316560 | + | 162 | WP_000051146.1 | pleiotropic regulatory protein RsmS | - |
| C1P56_RS12320 (2316772) | 2316772..2320134 | - | 3363 | Protein_2396 | mechanosensitive channel MscK | - |
| C1P56_RS12325 (2320262) | 2320262..2320908 | - | 647 | Protein_2397 | multidrug efflux transporter transcriptional repressor AcrR | - |
| C1P56_RS12330 (2321050) | 2321050..2322243 | + | 1194 | WP_134796460.1 | Multidrug resistance protein MdtA | VF |
| C1P56_RS12335 (2322266) | 2322266..2325415 | + | 3150 | WP_001132466.1 | Multidrug resistance protein MdtC | VF |
| C1P56_RS12340 (2325961) | 2325961..2326335 | + | 375 | WP_119171621.1 | Hha toxicity modulator TomB | Antitoxin Detail |
| C1P56_RS12345 (2326361) | 2326361..2326579 | + | 219 | WP_001291435.1 | HHA domain-containing protein | Toxin Detail |
| C1P56_RS12350 (2326751) | 2326751..2327302 | + | 552 | WP_000102564.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| C1P56_RS12355 (2327418) | 2327418..2327888 | + | 471 | WP_000136192.1 | YlaC family protein | - |
| C1P56_RS12360 (2328052) | 2328052..2329602 | + | 1551 | WP_134796461.1 | hypothetical protein | VF |
| C1P56_RS12365 (2329644) | 2329644..2329997 | - | 354 | WP_000878140.1 | DUF1428 domain-containing protein | - |
| C1P56_RS28495 (2330529) | 2330529..2330852 | - | 324 | WP_241559939.1 | hypothetical protein | - |
| C1P56_RS12375 (2331053) | 2331053..2331280 | - | 228 | WP_000513895.1 | DUF2188 domain-containing protein | - |
| C1P56_RS12380 (2331498) | 2331498..2332118 | - | 621 | WP_001267010.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| C1P56_RS12385 (2332780) | 2332780..2333205 | - | 426 | WP_000723065.1 | lysozyme inhibitor LprI family protein | - |
| C1P56_RS12390 (2333207) | 2333207..2334109 | - | 903 | WP_119172650.1 | hypothetical protein | - |
| C1P56_RS12395 (2335084) | 2335084..2336520 | - | 1437 | WP_134796462.1 | type III restriction endonuclease subunit R | - |
| C1P56_RS27855 (2336894) | 2336894..2337058 | - | 165 | WP_000936700.1 | hypothetical protein | - |
| C1P56_RS12400 (2337438) | 2337438..2338508 | - | 1071 | WP_134796463.1 | hypothetical protein ; Integrase | Integrase |
| C1P56_RS12410 (2338877) | 2338877..2339188 | + | 312 | WP_000409911.1 | MGMT family protein | - |
| C1P56_RS12415 (2339218) | 2339218..2340564 | - | 1347 | WP_004969946.1 | IS4-like element IS4 family transposase | - |
| C1P56_RS12420 (2340657) | 2340657..2341229 | - | 573 | WP_000779826.1 | YbaY family lipoprotein | - |
| C1P56_RS12425 (2341447) | 2341447..2342307 | + | 861 | WP_134796464.1 | acyl-CoA thioesterase II | - |
| C1P56_RS12430 (2342356) | 2342356..2343570 | - | 1215 | WP_134796465.1 | ammonium transporter | - |
| C1P56_RS12435 (2343600) | 2343600..2343938 | - | 339 | WP_000780338.1 | P-II family nitrogen regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|