MGE detailed information
MGE type: IS/Tn MGE length: 1143 bp
Accession: NZ_CP026836 Location: 1351013..1352155 Organism: Shigella boydii strain ATCC 49812 Replicon: chromosome
Accession: NZ_CP026836 Location: 1351013..1352155 Organism: Shigella boydii strain ATCC 49812 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P56_RS07110 () | 1346405..1347247 | + | 843 | WP_134796355.1 | Rha family phage regulatory protein | - |
| C1P56_RS07115 () | 1347264..1347545 | + | 282 | WP_134796356.1 | YdaE family protein | - |
| C1P56_RS07120 () | 1347620..1347916 | + | 297 | WP_000022246.1 | hypothetical protein | - |
| C1P56_RS07125 () | 1347940..1349880 | + | 1941 | WP_077788306.1 | exodeoxyribonuclease VIII | - |
| C1P56_RS07130 () | 1349858..1350154 | + | 297 | WP_001277359.1 | host-nuclease inhibitor Gam family protein | - |
| C1P56_RS07135 () | 1350160..1350972 | + | 813 | WP_241560024.1 | AAA family ATPase | - |
| C1P56_RS07140 () | 1351013..1352155 | - | 1143 | WP_134796357.1 | IS3 family transposase ISSd1 | Transposase |
| C1P56_RS07145 () | 1352271..1352510 | + | 240 | WP_000932577.1 | hypothetical protein | - |
| C1P56_RS07150 () | 1352550..1352738 | + | 189 | WP_000276806.1 | DUF1187 family protein | - |
| - () | 1352556..1352734 | - | 179 | NuclAT_1 | - | - |
| - () | 1352556..1352734 | - | 179 | NuclAT_1 | - | - |
| - () | 1352556..1352734 | - | 179 | NuclAT_1 | - | - |
| - () | 1352556..1352734 | - | 179 | NuclAT_1 | - | - |
| C1P56_RS07155 () | 1352845..1353126 | + | 282 | WP_077901267.1 | excisionase | - |
| C1P56_RS07160 () | 1353092..1354168 | + | 1077 | WP_001189098.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| - | 1354299..1354533 | + | 235 | - | - | Antitoxin Detail |
| - | 1354300..1354403 | - | 104 | - | - | Toxin Detail |
| C1P56_RS07165 () | 1354561..1354902 | - | 342 | WP_000976480.1 | YebY family protein | - |
| C1P56_RS07170 () | 1354915..1355787 | - | 873 | WP_000879307.1 | copper homeostasis membrane protein CopD | - |
| C1P56_RS07175 () | 1355791..1356165 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| C1P56_RS07180 () | 1356304..1356534 | + | 231 | WP_000916767.1 | DNA polymerase III subunit theta | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|