MGE detailed information
MGE type: Prophage MGE length: 53108 bp
Accession: NZ_CP026834 Location: 866272..919379 Organism: Shigella dysenteriae strain ATCC 49347 Replicon: chromosome
Accession: NZ_CP026834 Location: 866272..919379 Organism: Shigella dysenteriae strain ATCC 49347 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B83_RS04835 () | 861696..863390 | - | 1695 | WP_077897541.1 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
| C5B83_RS04840 () | 863561..863743 | - | 183 | WP_000009307.1 | DUF2158 domain-containing protein | - |
| C5B83_RS04845 () | 863822..864739 | - | 918 | WP_129592878.1 | DUF808 domain-containing protein | - |
| C5B83_RS04850 () | 864912..865832 | + | 921 | WP_001212273.1 | drug/metabolite exporter YedA | - |
| C5B83_RS04855 () | 865821..866291 | - | 471 | WP_000786008.1 | VSPR family DNA mismatch endonuclease | - |
| C5B83_RS04860 () | 866272..867690 | - | 1419 | WP_001157235.1 | DNA-cytosine methyltransferase | - |
| C5B83_RS04865 () | 867757..868452 | - | 696 | WP_000365569.1 | phosphohydrolase | - |
| C5B83_RS04870 () | 868492..868773 | - | 282 | WP_001297704.1 | cell division protein DrpB | - |
| C5B83_RS04875 () | 869424..870002 | + | 579 | Protein_952 | porin | - |
| C5B83_RS04885 () | 871336..871833 | + | 498 | Protein_954 | porin | - |
| C5B83_RS04890 () | 871943..872640 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C5B83_RS25550 () | 873202..873321 | + | 120 | Protein_956 | protein deglycase HchA | - |
| C5B83_RS04910 () | 874090..874830 | + | 741 | Protein_958 | protein deglycase HchA | - |
| C5B83_RS04915 () | 874938..876296 | - | 1359 | WP_129592879.1 | two-component system sensor histidine kinase HprS | - |
| C5B83_RS04920 () | 876296..876967 | - | 672 | WP_001339045.1 | putative transcriptional regulatory protein YedW | VF |
| C5B83_RS04925 () | 877100..877513 | + | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| C5B83_RS04930 () | 877622..878626 | + | 1005 | WP_000740102.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| C5B83_RS04935 () | 878627..879262 | + | 636 | WP_001241113.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| C5B83_RS04940 () | 879519..880169 | + | 651 | WP_162281804.1 | metal-binding protein ZinT | - |
| C5B83_RS04945 () | 880387..881543 | + | 1157 | WP_094096479.1 | IS3 family transposase IS600 | Transposase |
| C5B83_RS04950 () | 881779..881874 | + | 96 | Protein_966 | cytochrome B | - |
| C5B83_RS04960 () | 883238..883645 | + | 408 | Protein_968 | cytochrome b | - |
| C5B83_RS04965 () | 884546..885714 | + | 1169 | WP_129592881.1 | IS3 family transposase ISLad1 | Transposase |
| C5B83_RS04975 () | 885874..886143 | - | 270 | Protein_970 | tail fiber assembly protein | - |
| C5B83_RS04980 () | 886200..886748 | + | 549 | Protein_971 | class I SAM-dependent methyltransferase | - |
| C5B83_RS04990 () | 887513..887644 | + | 132 | Protein_973 | methyltransferase | - |
| C5B83_RS05000 () | 888736..890379 | + | 1644 | WP_046891740.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| C5B83_RS05010 () | 890559..891182 | - | 624 | WP_000551126.1 | DUF4376 domain-containing protein | - |
| C5B83_RS05015 () | 891133..892401 | - | 1269 | Protein_977 | prophage tail fiber N-terminal domain-containing protein | - |
| C5B83_RS05020 () | 892425..892970 | - | 546 | WP_000902849.1 | tail fiber assembly protein | - |
| C5B83_RS25915 () | 892973..893041 | - | 69 | Protein_979 | phage tail protein | - |
| C5B83_RS05025 () | 893097..893794 | + | 698 | WP_134795416.1 | IS1 family transposase IS1R | Transposase |
| C5B83_RS05030 () | 893810..894738 | + | 929 | Protein_981 | IS3 family transposase IS600 | Transposase |
| C5B83_RS05040 () | 894788..895537 | - | 750 | Protein_982 | hypothetical protein | - |
| C5B83_RS05045 () | 895539..895817 | - | 279 | WP_000929754.1 | hypothetical protein | - |
| C5B83_RS05055 () | 895985..896140 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 896152..896210 | + | 59 | - | - | Antitoxin Detail |
| C5B83_RS05070 () | 896792..897208 | - | 417 | WP_005069274.1 | hypothetical protein | - |
| C5B83_RS05075 () | 897320..897700 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C5B83_RS05080 () | 897697..898044 | + | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| C5B83_RS05085 () | 898093..899631 | + | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| C5B83_RS05090 () | 899681..900136 | - | 456 | WP_000335375.1 | ead/Ea22-like family protein | - |
| C5B83_RS05095 () | 900123..900428 | - | 306 | WP_001266147.1 | DUF4406 domain-containing protein | - |
| C5B83_RS05100 () | 900425..900847 | - | 423 | WP_001151146.1 | DUF977 family protein | - |
| C5B83_RS05105 () | 900888..901946 | - | 1059 | WP_129592882.1 | phage replisome organizer | - |
| C5B83_RS05110 () | 902018..902443 | - | 426 | WP_000693856.1 | toxin YdaT family protein | - |
| C5B83_RS05115 () | 902440..902709 | - | 270 | WP_001117462.1 | helix-turn-helix domain-containing protein | - |
| C5B83_RS05120 () | 902725..902961 | + | 237 | Protein_995 | IS3 family transposase ISSd1 | Transposase |
| C5B83_RS05125 () | 903017..903714 | + | 698 | WP_134795416.1 | IS1 family transposase IS1R | Transposase |
| C5B83_RS05130 () | 903730..904658 | + | 929 | Protein_997 | IS3 family transposase IS600 | Transposase |
| C5B83_RS05135 () | 904698..905290 | + | 593 | Protein_998 | hypothetical protein ; Integrase | Integrase |
| C5B83_RS05145 () | 905501..906298 | + | 798 | WP_001302302.1 | DgsA anti-repressor MtfA | - |
| C5B83_RS05155 () | 906788..913049 | + | 6262 | Protein_1000 | Ig-like domain-containing protein | - |
| C5B83_RS05160 () | 913114..914270 | + | 1157 | WP_094112617.1 | IS3 family transposase IS600 | Transposase |
| C5B83_RS05165 () | 914313..916037 | + | 1725 | Protein_1002 | Ig-like domain-containing protein | - |
| C5B83_RS05170 () | 916299..916469 | - | 171 | Protein_1003 | lipopolysaccharide heptosyltransferase family protein | - |
| C5B83_RS05175 () | 916936..916937 | - | 2 | WP_284521009.1 | IS1 family transposase IS1X2 | Transposase |
| C5B83_RS05180 () | 917236..917451 | - | 216 | Protein_1005 | lipopolysaccharide heptosyltransferase family protein | - |
| C5B83_RS05190 () | 918543..919859 | + | 1317 | Protein_1007 | shikimate transporter | - |
| C5B83_RS05195 () | 919961..921415 | + | 1455 | WP_001060213.1 | AMP nucleosidase | - |
| C5B83_RS05200 () | 921758..922474 | + | 717 | WP_000532912.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|