MGE detailed information
MGE type: Genomic_island MGE length: 19393 bp
Accession: NZ_CP026834 Location: 663127..682519 Organism: Shigella dysenteriae strain ATCC 49347 Replicon: chromosome
Accession: NZ_CP026834 Location: 663127..682519 Organism: Shigella dysenteriae strain ATCC 49347 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B83_RS03625 () | 658324..660957 | + | 2634 | WP_073816977.1 | lipid-binding membrane homeostasis protein YebT | - |
| C5B83_RS03630 () | 661037..662476 | + | 1440 | WP_005024823.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| C5B83_RS03635 () | 662594..662830 | + | 237 | WP_001295499.1 | YebV family protein | - |
| C5B83_RS03640 () | 662935..663126 | + | 192 | WP_000457842.1 | YebW family protein | - |
| C5B83_RS03645 () | 663127..663783 | - | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| C5B83_RS03655 () | 664535..666241 | + | 1707 | WP_024259619.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| C5B83_RS03665 () | 666421..667044 | - | 624 | WP_024259614.1 | DUF4376 domain-containing protein | - |
| C5B83_RS03670 () | 666995..668216 | - | 1222 | Protein_716 | prophage tail fiber N-terminal domain-containing protein | - |
| C5B83_RS03675 () | 668194..668949 | - | 756 | Protein_717 | IS66 family transposase ISEc22 | Transposase |
| C5B83_RS03680 () | 668998..669345 | - | 348 | WP_129592866.1 | IS66 family transposase ISKpn24 | Transposase |
| C5B83_RS03685 () | 669342..669722 | - | 381 | WP_001171522.1 | IS66 family transposase ISEc8 | Transposase |
| C5B83_RS03695 () | 671390..672517 | - | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C5B83_RS03700 () | 672792..673066 | + | 275 | Protein_722 | hypothetical protein | - |
| C5B83_RS03705 () | 673166..675106 | + | 1941 | WP_005029490.1 | exodeoxyribonuclease VIII | - |
| C5B83_RS03710 () | 675084..675380 | + | 297 | WP_001277359.1 | host-nuclease inhibitor Gam family protein | - |
| C5B83_RS03715 () | 675537..677075 | - | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| C5B83_RS03720 () | 677124..677471 | - | 348 | WP_046891812.1 | IS66 family transposase ISKpn24 | Transposase |
| C5B83_RS03725 () | 677468..677848 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C5B83_RS03730 () | 677954..678303 | + | 350 | Protein_728 | IS3 family transposase ISSd1 | Transposase |
| C5B83_RS03740 () | 679552..679993 | + | 442 | Protein_730 | integrase | - |
| C5B83_RS03750 () | 681258..681785 | + | 528 | Protein_732 | hypothetical protein ; Integrase | Integrase |
| - | 681916..682150 | + | 235 | - | - | Antitoxin Detail |
| - | 681917..682020 | - | 104 | - | - | Toxin Detail |
| C5B83_RS03755 () | 682178..682519 | - | 342 | WP_000976476.1 | YebY family protein | - |
| C5B83_RS03760 () | 682532..683353 | - | 822 | WP_046891729.1 | copper homeostasis membrane protein CopD | - |
| C5B83_RS03765 () | 683459..684687 | + | 1229 | WP_088895425.1 | IS3-like element IS2 family transposase | - |
| C5B83_RS03770 () | 684744..685118 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| C5B83_RS03775 () | 685257..685487 | + | 231 | WP_000916761.1 | DNA polymerase III subunit theta | - |
| C5B83_RS03780 () | 685589..686245 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| C5B83_RS03785 () | 686269..686931 | + | 663 | WP_000944260.1 | exodeoxyribonuclease X | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|