MGE detailed information
MGE type: Prophage MGE length: 77971 bp
Accession: NZ_CP026832 Location: 2726548..2804518 Organism: Shigella dysenteriae strain ATCC 49346 Replicon: chromosome
Accession: NZ_CP026832 Location: 2726548..2804518 Organism: Shigella dysenteriae strain ATCC 49346 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B81_RS14515 () | 2721974..2723668 | - | 1695 | WP_077897541.1 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
| C5B81_RS14520 () | 2723839..2724020 | - | 182 | Protein_2793 | DUF2158 domain-containing protein | - |
| C5B81_RS14525 () | 2724099..2725016 | - | 918 | WP_000922682.1 | DUF808 domain-containing protein | - |
| C5B81_RS14530 () | 2725189..2726108 | + | 920 | Protein_2795 | drug/metabolite exporter YedA | - |
| C5B81_RS14535 () | 2726097..2726567 | - | 471 | WP_000786008.1 | VSPR family DNA mismatch endonuclease | - |
| C5B81_RS14540 () | 2726548..2727966 | - | 1419 | WP_001157235.1 | DNA-cytosine methyltransferase | - |
| C5B81_RS14545 () | 2728033..2728728 | - | 696 | WP_000365569.1 | phosphohydrolase | - |
| C5B81_RS14550 () | 2728768..2729049 | - | 282 | WP_001297704.1 | cell division protein DrpB | - |
| C5B81_RS14555 () | 2729700..2730278 | + | 579 | Protein_2800 | porin | - |
| C5B81_RS14565 () | 2731612..2732109 | + | 498 | Protein_2802 | porin | - |
| C5B81_RS14570 () | 2732219..2732715 | + | 497 | Protein_2803 | IS1 family transposase IS1X2 | Transposase |
| C5B81_RS14575 () | 2732766..2733979 | + | 1214 | WP_167544914.1 | IS3 family transposase IS629 | Transposase |
| C5B81_RS14580 () | 2734023..2734229 | + | 207 | Protein_2805 | IS1 family transposase IS1X2 | Transposase |
| C5B81_RS26190 () | 2734791..2734910 | + | 120 | Protein_2806 | protein deglycase HchA | - |
| C5B81_RS14600 () | 2735679..2736419 | + | 741 | Protein_2808 | protein deglycase HchA | - |
| C5B81_RS14605 () | 2736527..2737885 | - | 1359 | WP_000826750.1 | two-component system sensor histidine kinase HprS | - |
| C5B81_RS14610 () | 2737885..2738556 | - | 672 | WP_001339045.1 | putative transcriptional regulatory protein YedW | VF |
| C5B81_RS14615 () | 2738689..2739102 | + | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| C5B81_RS14620 () | 2739211..2740215 | + | 1005 | WP_000740102.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| C5B81_RS14625 () | 2740216..2740851 | + | 636 | WP_001241113.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| C5B81_RS14630 () | 2741108..2741758 | + | 651 | WP_001007759.1 | metal-binding protein ZinT | - |
| C5B81_RS14635 () | 2741976..2743132 | + | 1157 | WP_129592867.1 | IS3 family transposase IS600 | Transposase |
| C5B81_RS14640 () | 2743368..2743463 | + | 96 | Protein_2816 | cytochrome B | - |
| C5B81_RS14650 () | 2744827..2745234 | + | 408 | Protein_2818 | cytochrome b | - |
| C5B81_RS14655 () | 2746135..2747303 | + | 1169 | WP_094096507.1 | IS3 family transposase ISLad1 | Transposase |
| C5B81_RS14665 () | 2747463..2747732 | - | 270 | Protein_2820 | tail fiber assembly protein | - |
| C5B81_RS14670 () | 2747789..2748457 | + | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| C5B81_RS14680 () | 2749549..2751192 | + | 1644 | WP_046891740.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| C5B81_RS14690 () | 2751372..2751995 | - | 624 | WP_024259614.1 | DUF4376 domain-containing protein | - |
| C5B81_RS14695 () | 2751946..2753214 | - | 1269 | Protein_2825 | prophage tail fiber N-terminal domain-containing protein | - |
| C5B81_RS14700 () | 2753238..2753783 | - | 546 | WP_000902849.1 | tail fiber assembly protein | - |
| C5B81_RS26805 () | 2753786..2753854 | - | 69 | Protein_2827 | phage tail protein | - |
| C5B81_RS14705 () | 2753910..2754607 | + | 698 | WP_252988931.1 | IS1 family transposase IS1R | Transposase |
| C5B81_RS14710 () | 2754623..2755551 | + | 929 | Protein_2829 | IS3 family transposase IS600 | Transposase |
| C5B81_RS14720 () | 2755601..2756350 | - | 750 | Protein_2830 | hypothetical protein | - |
| C5B81_RS14725 () | 2756352..2756630 | - | 279 | WP_000929754.1 | hypothetical protein | - |
| C5B81_RS14735 () | 2756798..2756953 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 2756965..2757023 | + | 59 | - | - | Antitoxin Detail |
| C5B81_RS14750 () | 2757605..2758021 | - | 417 | WP_005069274.1 | hypothetical protein | - |
| C5B81_RS14755 () | 2758133..2758513 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C5B81_RS14760 () | 2758510..2758857 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C5B81_RS14765 () | 2758906..2760444 | + | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| C5B81_RS14770 () | 2760744..2761871 | - | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| C5B81_RS14780 () | 2762014..2762469 | - | 456 | WP_000335375.1 | ead/Ea22-like family protein | - |
| C5B81_RS14785 () | 2762456..2762761 | - | 306 | WP_001266147.1 | DUF4406 domain-containing protein | - |
| C5B81_RS14790 () | 2762758..2763180 | - | 423 | WP_001151146.1 | DUF977 family protein | - |
| C5B81_RS14795 () | 2763221..2764291 | - | 1071 | WP_024259707.1 | hypothetical protein | - |
| C5B81_RS14800 () | 2764363..2764788 | - | 426 | WP_000693856.1 | toxin YdaT family protein | - |
| C5B81_RS14805 () | 2764785..2765054 | - | 270 | WP_001117462.1 | helix-turn-helix domain-containing protein | - |
| C5B81_RS14810 () | 2765070..2765306 | + | 237 | Protein_2844 | IS3 family transposase ISSd1 | Transposase |
| C5B81_RS14815 () | 2765362..2766059 | + | 698 | WP_284513892.1 | IS1 family transposase IS1R | Transposase |
| C5B81_RS14825 () | 2767450..2768316 | + | 867 | Protein_2847 | IS3 family transposase IS600 | Transposase |
| C5B81_RS14830 () | 2768357..2768949 | + | 593 | Protein_2848 | hypothetical protein ; Integrase | Integrase |
| C5B81_RS14840 () | 2769160..2769957 | + | 798 | WP_001302302.1 | DgsA anti-repressor MtfA | - |
| C5B81_RS14850 () | 2770447..2774086 | + | 3640 | Protein_2850 | inverse autotransporter beta domain-containing protein | - |
| C5B81_RS14860 () | 2775561..2778026 | + | 2466 | Protein_2852 | Ig-like domain-containing protein | - |
| C5B81_RS14865 () | 2778091..2779247 | + | 1157 | WP_094112617.1 | IS3 family transposase IS600 | Transposase |
| C5B81_RS14870 () | 2779290..2781014 | + | 1725 | Protein_2854 | Ig-like domain-containing protein | - |
| C5B81_RS14875 () | 2781276..2781422 | - | 147 | Protein_2855 | lipopolysaccharide heptosyltransferase family protein | - |
| C5B81_RS14885 () | 2782211..2783104 | - | 894 | Protein_2857 | lipopolysaccharide heptosyltransferase family protein | - |
| C5B81_RS14895 () | 2784196..2785512 | + | 1317 | Protein_2859 | shikimate transporter | - |
| C5B81_RS14900 () | 2785614..2787067 | + | 1454 | Protein_2860 | AMP nucleosidase | - |
| C5B81_RS14905 () | 2787410..2787766 | + | 357 | Protein_2861 | putative transcriptional regulatory protein YeeN | VF |
| C5B81_RS14910 () | 2787823..2788520 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C5B81_RS14915 () | 2788535..2788903 | + | 369 | Protein_2863 | putative transcriptional regulatory protein YeeN | VF |
| C5B81_RS14925 () | 2789530..2790380 | - | 851 | Protein_2864 | toxic metabolite efflux MATE transporter YeeO | - |
| C5B81_RS14930 () | 2790436..2791133 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C5B81_RS14935 () | 2791149..2791790 | - | 642 | Protein_2866 | toxic metabolite efflux MATE transporter YeeO | - |
| C5B81_RS14945 () | 2792064..2793014 | - | 951 | WP_001010986.1 | HTH-type transcriptional regulator Cbl | - |
| C5B81_RS14950 () | 2793116..2794033 | - | 918 | WP_001011482.1 | nitrogen assimilation transcriptional regulator NAC | - |
| C5B81_RS14960 () | 2794492..2795427 | - | 936 | WP_000986350.1 | L,D-transpeptidase | - |
| C5B81_RS14965 () | 2795489..2796568 | - | 1080 | WP_001166156.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| C5B81_RS14970 () | 2796580..2797323 | - | 744 | WP_005042779.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| C5B81_RS14975 () | 2797320..2797865 | - | 546 | WP_000973150.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| C5B81_RS26810 () | 2798017..2798190 | - | 174 | Protein_2873 | cobalamin biosynthesis protein | - |
| C5B81_RS26815 () | 2798169..2798357 | - | 189 | Protein_2874 | IS4 family transposase | - |
| C5B81_RS14995 () | 2800094..2801322 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| C5B81_RS15005 () | 2801404..2802426 | + | 1023 | WP_000255950.1 | IS21 family transposase IS100kyp | Transposase |
| C5B81_RS15010 () | 2802423..2802899 | + | 477 | Protein_2878 | IS21 family transposase IS100 | Transposase |
| C5B81_RS15015 () | 2802954..2804167 | + | 1214 | WP_167544914.1 | IS3 family transposase IS629 | Transposase |
| C5B81_RS15020 () | 2804207..2804518 | + | 312 | Protein_2880 | IS21 family transposase IS100kyp | Transposase |
| C5B81_RS15030 () | 2804708..2804974 | + | 267 | WP_064717141.1 | EutP/PduV family microcompartment system protein | - |
| C5B81_RS15035 () | 2805075..2805404 | - | 330 | WP_000450409.1 | DUF496 family protein | - |
| C5B81_RS15040 () | 2805576..2806634 | - | 1059 | WP_001200876.1 | FUSC family protein | - |
| C5B81_RS15045 () | 2806832..2807305 | - | 474 | WP_001105385.1 | DNA gyrase inhibitor SbmC | - |
| C5B81_RS15050 () | 2807423..2808589 | - | 1167 | Protein_2885 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
| C5B81_RS26200 () | 2808516..2808674 | + | 159 | WP_001302630.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|