MGE detailed information
MGE type: Prophage MGE length: 52416 bp
Accession: NZ_CP026832 Location: 2526573..2578988 Organism: Shigella dysenteriae strain ATCC 49346 Replicon: chromosome
Accession: NZ_CP026832 Location: 2526573..2578988 Organism: Shigella dysenteriae strain ATCC 49346 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B81_RS13305 () | 2522431..2523231 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| C5B81_RS13310 () | 2523244..2524094 | + | 851 | Protein_2560 | PTS mannose transporter subunit IID | - |
| C5B81_RS13315 () | 2524149..2524607 | + | 459 | WP_000156259.1 | DUF986 family protein | - |
| C5B81_RS13320 () | 2525035..2525601 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| C5B81_RS13325 () | 2525598..2526407 | - | 810 | WP_000010113.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| C5B81_RS13330 () | 2526573..2526716 | - | 144 | WP_071829664.1 | cold shock domain-containing protein | - |
| C5B81_RS13335 () | 2526729..2526872 | - | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| C5B81_RS13345 () | 2528198..2528485 | - | 288 | WP_001006852.1 | YebO family protein | - |
| C5B81_RS13350 () | 2528560..2528703 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| C5B81_RS13355 () | 2528862..2529101 | + | 240 | WP_001211011.1 | YobH family protein | - |
| C5B81_RS13360 () | 2529244..2530035 | - | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| C5B81_RS13365 () | 2530212..2531585 | + | 1374 | WP_001127216.1 | MFS transporter | - |
| C5B81_RS13370 () | 2531631..2532512 | - | 882 | WP_000984517.1 | protease HtpX | - |
| C5B81_RS13375 () | 2532704..2534752 | - | 2049 | WP_024259617.1 | carboxy terminal-processing peptidase | - |
| C5B81_RS13380 () | 2534772..2535470 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| C5B81_RS13385 () | 2535567..2536064 | - | 498 | WP_001043888.1 | L-methionine (R)-S-oxide reductase | - |
| C5B81_RS13390 () | 2536194..2537477 | + | 1284 | WP_024259618.1 | membrane integrity lipid transport subunit YebS | - |
| C5B81_RS13395 () | 2537446..2540079 | + | 2634 | WP_073816977.1 | hypothetical protein | VF |
| C5B81_RS13400 () | 2540159..2541598 | + | 1440 | WP_005024823.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| C5B81_RS13405 () | 2541716..2541952 | + | 237 | WP_001295499.1 | YebV family protein | - |
| C5B81_RS13410 () | 2542057..2542248 | + | 192 | WP_000457842.1 | YebW family protein | - |
| C5B81_RS13415 () | 2542249..2542905 | - | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| C5B81_RS13425 () | 2543657..2545363 | + | 1707 | WP_024259619.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| C5B81_RS13435 () | 2545543..2546166 | - | 624 | WP_032335698.1 | DUF4376 domain-containing protein | - |
| C5B81_RS13440 () | 2546117..2547323 | - | 1207 | Protein_2584 | prophage tail fiber N-terminal domain-containing protein | - |
| C5B81_RS13445 () | 2547417..2547797 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C5B81_RS13450 () | 2547794..2548141 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C5B81_RS13455 () | 2548190..2549727 | + | 1538 | Protein_2587 | IS66 family transposase ISEc22 | Transposase |
| C5B81_RS13460 () | 2549812..2550168 | - | 357 | WP_284513918.1 | IS66 family transposase IS682 | Transposase |
| C5B81_RS13465 () | 2550317..2551072 | - | 756 | Protein_2589 | IS66 family transposase ISEc22 | Transposase |
| C5B81_RS13470 () | 2551121..2551468 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C5B81_RS13475 () | 2551465..2551845 | - | 381 | WP_001171522.1 | IS66 family transposase ISEc8 | Transposase |
| C5B81_RS13485 () | 2553334..2554263 | - | 930 | Protein_2593 | IS110 family transposase ISSso6 | Transposase |
| C5B81_RS13490 () | 2554538..2554813 | + | 276 | Protein_2594 | hypothetical protein | - |
| C5B81_RS13495 () | 2554913..2556853 | + | 1941 | WP_134801104.1 | exodeoxyribonuclease VIII | - |
| C5B81_RS13500 () | 2556831..2557127 | + | 297 | WP_001277359.1 | host-nuclease inhibitor Gam family protein | - |
| C5B81_RS13505 () | 2557284..2558820 | - | 1537 | Protein_2597 | IS66 family transposase ISEc22 | Transposase |
| C5B81_RS13510 () | 2558869..2559216 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| C5B81_RS13515 () | 2559213..2559593 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C5B81_RS13520 () | 2559699..2560048 | + | 350 | Protein_2600 | IS3 family transposase ISSd1 | Transposase |
| C5B81_RS13530 () | 2561297..2561738 | + | 442 | Protein_2602 | integrase | - |
| C5B81_RS13540 () | 2563003..2563530 | + | 528 | Protein_2604 | hypothetical protein ; Integrase | Integrase |
| - | 2563661..2563895 | + | 235 | - | - | Antitoxin Detail |
| - | 2563662..2563765 | - | 104 | - | - | Toxin Detail |
| C5B81_RS13545 () | 2563923..2564264 | - | 342 | WP_000976476.1 | YebY family protein | - |
| C5B81_RS13550 () | 2564277..2565098 | - | 822 | WP_046891729.1 | copper homeostasis membrane protein CopD | - |
| C5B81_RS13555 () | 2565204..2566432 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| C5B81_RS13560 () | 2566489..2566863 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| C5B81_RS13565 () | 2567002..2567232 | + | 231 | WP_000916761.1 | DNA polymerase III subunit theta | - |
| C5B81_RS13570 () | 2567334..2567990 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| C5B81_RS13575 () | 2568014..2568676 | + | 663 | WP_000944260.1 | exodeoxyribonuclease X | - |
| C5B81_RS13580 () | 2568673..2570732 | - | 2060 | Protein_2612 | oligopeptidase B | - |
| C5B81_RS13585 () | 2570942..2571601 | - | 660 | WP_000024738.1 | tellurite resistance TerB family protein | - |
| C5B81_RS13590 () | 2571667..2572364 | + | 698 | WP_134795416.1 | IS1 family transposase IS1R | Transposase |
| C5B81_RS13595 () | 2572705..2573061 | - | 357 | WP_001295500.1 | protein YebF | - |
| C5B81_RS13600 () | 2573128..2573422 | - | 295 | Protein_2616 | DNA damage-inducible protein YebG | - |
| C5B81_RS13605 () | 2573555..2574733 | + | 1179 | WP_000173486.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| C5B81_RS13610 () | 2574789..2575430 | - | 642 | WP_000800510.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| C5B81_RS13615 () | 2575467..2577278 | - | 1812 | WP_001069475.1 | phosphogluconate dehydratase | - |
| C5B81_RS13620 () | 2577513..2578988 | - | 1476 | WP_000301720.1 | glucose-6-phosphate dehydrogenase | - |
| C5B81_RS13625 () | 2579326..2580195 | + | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| C5B81_RS13630 () | 2580323..2581765 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| C5B81_RS13635 () | 2581821..2582666 | - | 846 | WP_284529220.1 | Nif3-like dinuclear metal center hexameric protein | - |
| C5B81_RS26745 () | 2582689..2583210 | - | 522 | WP_241547528.1 | alpha/beta hydrolase-fold protein | - |
| C5B81_RS26750 () | 2583095..2583514 | - | 420 | WP_241525414.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|