MGE detailed information
MGE type: IScluster/Tn MGE length: 9489 bp
Accession: NZ_CP026831 Location: 2914517..2924005 Organism: Shigella dysenteriae strain ATCC 12039 Replicon: chromosome
Accession: NZ_CP026831 Location: 2914517..2924005 Organism: Shigella dysenteriae strain ATCC 12039 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P71_RS16295 (2909861) | 2909861..2910145 | + | 285 | WP_128880853.1 | protein YbjH | - |
| C1P71_RS16300 (2910187) | 2910187..2911329 | - | 1143 | WP_128880854.1 | MFS transporter | - |
| C1P71_RS16305 (2911614) | 2911614..2912210 | + | 597 | WP_128880855.1 | undecaprenyl-diphosphate phosphatase | - |
| C1P71_RS16310 (2912268) | 2912268..2913026 | + | 759 | WP_000450121.1 | DNA-binding transcriptional repressor DeoR | - |
| C1P71_RS16315 (2913073) | 2913073..2914110 | - | 1038 | Protein_2920 | serine-type D-Ala-D-Ala carboxypeptidase | - |
| C1P71_RS16320 (2914111) | 2914111..2914452 | + | 342 | Protein_2921 | transposase | - |
| C1P71_RS16325 (2914517) | 2914517..2914777 | + | 261 | Protein_2922 | transposase | - |
| C1P71_RS27000 (2914759) | 2914759..2914845 | + | 87 | Protein_2923 | hypothetical protein | - |
| C1P71_RS16330 (2914842) | 2914842..2915993 | + | 1152 | WP_001254927.1 | IS30-like element IS30 family transposase | - |
| C1P71_RS16335 (2916000) | 2916000..2916896 | + | 897 | Protein_2925 | IS3-like element IS600 family transposase | - |
| C1P71_RS16340 (2916943) | 2916943..2917521 | + | 579 | Protein_2926 | IS3 family transposase | - |
| C1P71_RS16345 (2917552) | 2917552..2918532 | - | 981 | Protein_2927 | aldose sugar dehydrogenase YliI | - |
| C1P71_RS16350 (2918643) | 2918643..2919026 | - | 384 | WP_000497137.1 | biofilm formation regulator BssR | - |
| C1P71_RS16355 (2919239) | 2919239..2920564 | + | 1326 | WP_000049378.1 | 30S ribosomal protein S12 methylthiotransferase RimO | - |
| C1P71_RS16360 (2920790) | 2920790..2921176 | + | 387 | WP_128880857.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P71_RS16365 (2921166) | 2921166..2921495 | + | 330 | WP_001280945.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| C1P71_RS16370 (2921622) | 2921622..2922466 | + | 845 | WP_128879749.1 | IS5-like element ISSfl7 family transposase | - |
| C1P71_RS16375 (2922475) | 2922475..2922600 | - | 126 | Protein_2933 | transposase | - |
| C1P71_RS16380 (2922777) | 2922777..2924005 | + | 1229 | WP_097293774.1 | IS3-like element IS2 family transposase | - |
| C1P71_RS16385 (2924016) | 2924016..2924402 | + | 387 | Protein_2935 | lysozyme RrrD | - |
| C1P71_RS26510 (2924399) | 2924399..2924875 | + | 477 | WP_171766292.1 | lysis system i-spanin subunit Rz | - |
| C1P71_RS16395 (2924958) | 2924958..2925470 | - | 513 | WP_166431503.1 | VTT domain-containing protein | - |
| C1P71_RS16400 (2925738) | 2925738..2926286 | - | 549 | WP_284514356.1 | hypothetical protein | - |
| C1P71_RS16405 (2926306) | 2926306..2926857 | + | 552 | WP_128880860.1 | terminase small subunit | - |
| C1P71_RS16410 (2926860) | 2926860..2928479 | + | 1620 | WP_128880861.1 | TerL protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|