MGE detailed information
MGE type: Prophage MGE length: 35242 bp
Accession: NZ_CP026831 Location: 2914120..2949361 Organism: Shigella dysenteriae strain ATCC 12039 Replicon: chromosome
Accession: NZ_CP026831 Location: 2914120..2949361 Organism: Shigella dysenteriae strain ATCC 12039 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P71_RS16295 (2909861) | 2909861..2910145 | + | 285 | WP_128880853.1 | protein YbjH | - |
| C1P71_RS16300 (2910187) | 2910187..2911329 | - | 1143 | WP_128880854.1 | MFS transporter | - |
| C1P71_RS16305 (2911614) | 2911614..2912210 | + | 597 | WP_128880855.1 | undecaprenyl-diphosphate phosphatase | - |
| C1P71_RS16310 (2912268) | 2912268..2913026 | + | 759 | WP_000450121.1 | DNA-binding transcriptional repressor DeoR | - |
| C1P71_RS16315 (2913073) | 2913073..2914110 | - | 1038 | Protein_2920 | serine-type D-Ala-D-Ala carboxypeptidase | - |
| C1P71_RS16320 (2914111) | 2914111..2914452 | + | 342 | Protein_2921 | transposase | - |
| C1P71_RS16325 (2914517) | 2914517..2914777 | + | 261 | Protein_2922 | transposase | - |
| C1P71_RS27000 (2914759) | 2914759..2914845 | + | 87 | Protein_2923 | hypothetical protein | - |
| C1P71_RS16330 (2914842) | 2914842..2915993 | + | 1152 | WP_001254927.1 | IS30-like element IS30 family transposase | - |
| C1P71_RS16335 (2916000) | 2916000..2916896 | + | 897 | Protein_2925 | IS3-like element IS600 family transposase | - |
| C1P71_RS16340 (2916943) | 2916943..2917521 | + | 579 | Protein_2926 | IS3 family transposase | - |
| C1P71_RS16345 (2917552) | 2917552..2918532 | - | 981 | Protein_2927 | aldose sugar dehydrogenase YliI | - |
| C1P71_RS16350 (2918643) | 2918643..2919026 | - | 384 | WP_000497137.1 | biofilm formation regulator BssR | - |
| C1P71_RS16355 (2919239) | 2919239..2920564 | + | 1326 | WP_000049378.1 | 30S ribosomal protein S12 methylthiotransferase RimO | - |
| C1P71_RS16360 (2920790) | 2920790..2921176 | + | 387 | WP_128880857.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C1P71_RS16365 (2921166) | 2921166..2921495 | + | 330 | WP_001280945.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| C1P71_RS16370 (2921622) | 2921622..2922466 | + | 845 | WP_128879749.1 | IS5-like element ISSfl7 family transposase | - |
| C1P71_RS16375 (2922475) | 2922475..2922600 | - | 126 | Protein_2933 | transposase | - |
| C1P71_RS16380 (2922777) | 2922777..2924005 | + | 1229 | WP_097293774.1 | IS3-like element IS2 family transposase | - |
| C1P71_RS16385 (2924016) | 2924016..2924402 | + | 387 | Protein_2935 | lysozyme RrrD | - |
| C1P71_RS26510 (2924399) | 2924399..2924875 | + | 477 | WP_171766292.1 | lysis system i-spanin subunit Rz | - |
| C1P71_RS16395 (2924958) | 2924958..2925470 | - | 513 | WP_166431503.1 | VTT domain-containing protein | - |
| C1P71_RS16400 (2925738) | 2925738..2926286 | - | 549 | WP_284514356.1 | hypothetical protein | - |
| C1P71_RS16405 (2926306) | 2926306..2926857 | + | 552 | WP_128880860.1 | terminase small subunit | - |
| C1P71_RS16410 (2926860) | 2926860..2928479 | + | 1620 | WP_128880861.1 | TerL protein | - |
| C1P71_RS16415 (2928479) | 2928479..2929537 | + | 1059 | Protein_2941 | DUF1073 domain-containing protein | - |
| C1P71_RS16420 (2929551) | 2929551..2930105 | + | 555 | WP_128880862.1 | phage minor head protein | - |
| C1P71_RS16425 (2930102) | 2930102..2930467 | + | 366 | Protein_2943 | DUF2213 domain-containing protein | - |
| C1P71_RS16430 (2930531) | 2930531..2930791 | + | 261 | Protein_2944 | transposase | - |
| C1P71_RS27005 (2930773) | 2930773..2930859 | + | 87 | Protein_2945 | hypothetical protein | - |
| C1P71_RS16435 (2930856) | 2930856..2932007 | + | 1152 | WP_128879741.1 | IS30-like element IS30 family transposase | - |
| C1P71_RS16440 (2932014) | 2932014..2932910 | + | 897 | Protein_2947 | IS3-like element IS600 family transposase | - |
| C1P71_RS16445 (2932947) | 2932947..2933075 | - | 129 | Protein_2948 | DUF977 family protein | - |
| C1P71_RS16450 (2933091) | 2933091..2933852 | - | 762 | WP_128880863.1 | DUF1627 domain-containing protein | - |
| C1P71_RS26515 (2933858) | 2933858..2934019 | - | 162 | WP_001190994.1 | hypothetical protein | - |
| C1P71_RS16455 (2934019) | 2934019..2934975 | - | 957 | WP_284514358.1 | DnaB helicase C-terminal domain-containing protein | - |
| C1P71_RS27010 (2934923) | 2934923..2935411 | - | 489 | WP_284514359.1 | DnaB-like helicase N-terminal domain-containing protein | - |
| C1P71_RS16460 (2935401) | 2935401..2936156 | - | 756 | WP_128880864.1 | helix-turn-helix domain-containing protein | - |
| C1P71_RS16465 (2936247) | 2936247..2936669 | - | 423 | WP_128880865.1 | toxin YdaT family protein | - |
| C1P71_RS16470 (2936653) | 2936653..2936928 | - | 276 | WP_128880866.1 | YdaS family helix-turn-helix protein | - |
| C1P71_RS16475 (2937036) | 2937036..2937497 | + | 462 | WP_128880867.1 | helix-turn-helix domain-containing protein | - |
| C1P71_RS16480 (2937751) | 2937751..2937906 | + | 156 | WP_000379555.1 | DUF1391 family protein | - |
| C1P71_RS16485 (2937908) | 2937908..2938111 | + | 204 | WP_001005968.1 | hypothetical protein | - |
| C1P71_RS16505 (2940116) | 2940116..2940964 | + | 849 | WP_128880870.1 | Rha family phage regulatory protein | - |
| C1P71_RS16510 (2940981) | 2940981..2941262 | + | 282 | WP_001068999.1 | YdaE family protein | - |
| C1P71_RS16515 (2941289) | 2941289..2941633 | + | 345 | WP_284514363.1 | DNA breaking-rejoining protein | - |
| C1P71_RS16520 (2941657) | 2941657..2943596 | + | 1940 | Protein_2963 | exodeoxyribonuclease VIII | - |
| C1P71_RS16530 (2943574) | 2943574..2943870 | + | 297 | WP_001277359.1 | host-nuclease inhibitor Gam family protein | - |
| C1P71_RS16535 (2943930) | 2943930..2944973 | + | 1044 | WP_284514364.1 | ATP-binding protein | - |
| - (2945030) | 2945030..2945208 | - | 179 | NuclAT_0 | - | - |
| - (2945030) | 2945030..2945208 | - | 179 | NuclAT_0 | - | - |
| - (2945030) | 2945030..2945208 | - | 179 | NuclAT_0 | - | - |
| - (2945030) | 2945030..2945208 | - | 179 | NuclAT_0 | - | - |
| C1P71_RS16540 (2945024) | 2945024..2945212 | + | 189 | WP_000276804.1 | DUF1187 family protein | - |
| C1P71_RS16545 (2945321) | 2945321..2946556 | + | 1236 | WP_128880874.1 | excisionase | - |
| C1P71_RS16550 (2946792) | 2946792..2947610 | + | 819 | WP_128881637.1 | bifunctional pyridoxal phosphate/fructose-1,6-bisphosphate phosphatase | - |
| C1P71_RS16555 (2947611) | 2947611..2948669 | - | 1059 | WP_000891660.1 | molybdenum ABC transporter ATP-binding protein ModC | - |
| C1P71_RS16560 (2948672) | 2948672..2949361 | - | 690 | WP_000604034.1 | molybdate ABC transporter permease subunit | - |
| C1P71_RS16565 (2949361) | 2949361..2950134 | - | 774 | WP_000101994.1 | molybdate ABC transporter substrate-binding protein | - |
| C1P71_RS16570 (2950300) | 2950300..2950449 | - | 150 | WP_000891515.1 | multidrug efflux pump accessory protein AcrZ | - |
| C1P71_RS16575 (2950578) | 2950578..2951366 | + | 789 | WP_001147439.1 | molybdenum-dependent transcriptional regulator | - |
| C1P71_RS16580 (2951434) | 2951434..2952906 | + | 1473 | WP_128880875.1 | molybdate ABC transporter ATP-binding protein ModF | - |
| C1P71_RS16585 (2953169) | 2953169..2954185 | + | 1017 | WP_128880876.1 | UDP-glucose 4-epimerase GalE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|