MGE detailed information
MGE type: Prophage MGE length: 46472 bp
Accession: NZ_CP026828 Location: 3411558..3458029 Organism: Shigella dysenteriae strain ATCC 12037 Replicon: chromosome
Accession: NZ_CP026828 Location: 3411558..3458029 Organism: Shigella dysenteriae strain ATCC 12037 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P70_RS17890 () | 3407942..3409303 | + | 1362 | WP_000983895.1 | bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF | - |
| C1P70_RS17895 () | 3409315..3410508 | + | 1194 | WP_000209504.1 | tryptophan synthase subunit beta | - |
| C1P70_RS17900 () | 3410508..3411314 | + | 807 | WP_000443067.1 | tryptophan synthase subunit alpha | - |
| C1P70_RS17910 () | 3412366..3412491 | - | 126 | Protein_3453 | outer membrane protein OmpW | - |
| C1P70_RS26335 () | 3412796..3412966 | - | 171 | WP_000251936.1 | hypothetical protein | - |
| C1P70_RS17915 () | 3413081..3413349 | - | 269 | Protein_3455 | tail fiber assembly protein | - |
| C1P70_RS17920 () | 3413406..3414074 | + | 669 | WP_134807185.1 | class I SAM-dependent methyltransferase | - |
| C1P70_RS17930 () | 3414129..3414701 | - | 573 | WP_252988936.1 | tail fiber assembly protein | - |
| C1P70_RS17935 () | 3414713..3417688 | - | 2976 | WP_119178572.1 | phage tail protein | - |
| C1P70_RS17940 () | 3417753..3418352 | - | 600 | WP_134807187.1 | hypothetical protein | VF |
| C1P70_RS17945 () | 3418420..3421899 | - | 3480 | WP_134807188.1 | host specificity protein J | - |
| C1P70_RS26135 () | 3421966..3422304 | - | 339 | WP_153933134.1 | hypothetical protein | - |
| C1P70_RS17955 () | 3422377..3422926 | - | 550 | Protein_3462 | tail assembly protein | - |
| C1P70_RS17960 () | 3422923..3423666 | - | 744 | WP_000140704.1 | C40 family peptidase | - |
| C1P70_RS17965 () | 3423671..3424369 | - | 699 | WP_001152648.1 | phage minor tail protein L | - |
| C1P70_RS17970 () | 3424369..3424698 | - | 330 | WP_000847332.1 | phage tail protein | - |
| C1P70_RS17975 () | 3424695..3427268 | - | 2574 | WP_134807189.1 | phage tail tape measure protein | - |
| C1P70_RS17980 () | 3427249..3427662 | - | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| C1P70_RS17985 () | 3427689..3428120 | - | 432 | WP_000479095.1 | phage minor tail protein G | - |
| C1P70_RS17990 () | 3428134..3428745 | - | 612 | Protein_3469 | Ig domain-containing protein | - |
| C1P70_RS17995 () | 3428747..3429142 | - | 396 | WP_000683086.1 | phage minor tail U family protein | - |
| C1P70_RS18000 () | 3429139..3429672 | - | 534 | WP_000974980.1 | phage tail protein | - |
| C1P70_RS18005 () | 3429688..3430041 | - | 354 | WP_134807191.1 | head-tail joining protein | - |
| C1P70_RS18010 () | 3430034..3430417 | - | 384 | WP_134807192.1 | DNA-packaging protein FI | - |
| C1P70_RS18015 () | 3430468..3431496 | - | 1029 | WP_000522588.1 | major capsid protein | - |
| C1P70_RS18020 () | 3431554..3431901 | - | 348 | WP_134807193.1 | head decoration protein | - |
| C1P70_RS18025 () | 3431938..3433444 | - | 1507 | Protein_3476 | S49 family peptidase | - |
| C1P70_RS18030 () | 3433434..3435026 | - | 1593 | WP_134807194.1 | phage portal protein | - |
| C1P70_RS18035 () | 3435023..3435229 | - | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| C1P70_RS18040 () | 3435213..3437141 | - | 1929 | WP_024259736.1 | phage terminase large subunit family protein | - |
| C1P70_RS18045 () | 3437113..3437661 | - | 549 | WP_000867569.1 | terminase small subunit | - |
| C1P70_RS26340 () | 3438104..3438571 | - | 468 | WP_001082562.1 | lysis protein | - |
| C1P70_RS18055 () | 3438861..3439394 | - | 534 | WP_000992072.1 | lysozyme | - |
| C1P70_RS18060 () | 3439500..3439772 | + | 273 | WP_000369850.1 | hypothetical protein | - |
| C1P70_RS18065 () | 3439738..3440082 | - | 345 | WP_000193262.1 | YdfR family protein | - |
| C1P70_RS18070 () | 3440087..3440302 | - | 216 | WP_000284510.1 | class II holin family protein | - |
| C1P70_RS18080 () | 3441789..3443645 | - | 1857 | WP_000874316.1 | SASA family carbohydrate esterase | - |
| C1P70_RS18085 () | 3443726..3444423 | + | 698 | WP_134795416.1 | IS1 family transposase IS1R | Transposase |
| C1P70_RS18090 () | 3444682..3445017 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| C1P70_RS26835 () | 3445088..3445213 | + | 126 | Protein_3490 | hypothetical protein | - |
| C1P70_RS18100 () | 3445766..3445876 | - | 111 | WP_046891796.1 | DUF3927 family protein | - |
| C1P70_RS18115 () | 3446166..3447224 | - | 1059 | WP_134807195.1 | site-specific DNA-methyltransferase | - |
| C1P70_RS18120 () | 3447333..3447573 | - | 241 | Protein_3493 | hypothetical protein | - |
| C1P70_RS18125 () | 3447800..3448621 | - | 822 | WP_000762933.1 | antitermination protein | - |
| C1P70_RS18130 () | 3448618..3448992 | - | 375 | WP_000904114.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C1P70_RS18135 () | 3449005..3450051 | - | 1047 | WP_001265091.1 | DUF968 domain-containing protein | - |
| C1P70_RS26840 () | 3450053..3450331 | - | 279 | WP_134807196.1 | hypothetical protein | - |
| C1P70_RS18145 () | 3450398..3450649 | - | 252 | WP_000980988.1 | protein Rem | - |
| C1P70_RS18150 () | 3450866..3451021 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 3451033..3451091 | + | 59 | - | - | Antitoxin Detail |
| C1P70_RS18155 () | 3451313..3451576 | - | 264 | WP_242412557.1 | hypothetical protein | - |
| C1P70_RS18165 () | 3452990..3453157 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| C1P70_RS18170 () | 3453225..3454381 | + | 1157 | WP_094110543.1 | IS3 family transposase IS600 | Transposase |
| C1P70_RS18175 () | 3454427..3454909 | + | 483 | Protein_3504 | hypothetical protein ; Integrase | Integrase |
| C1P70_RS18180 () | 3454955..3455593 | - | 639 | WP_000737224.1 | outer membrane protein OmpW | - |
| C1P70_RS18190 () | 3457169..3457258 | + | 90 | Protein_3507 | YkgJ family cysteine cluster protein | - |
| C1P70_RS18195 () | 3457286..3458029 | + | 744 | WP_000028541.1 | YciC family protein | - |
| C1P70_RS18200 () | 3458059..3458598 | + | 540 | WP_000808667.1 | septation protein A | - |
| C1P70_RS18205 () | 3458703..3459101 | + | 399 | WP_000108160.1 | acyl-CoA thioester hydrolase YciA | - |
| C1P70_RS18210 () | 3459141..3459869 | - | 729 | WP_162281807.1 | TonB system transport protein TonB | - |
| C1P70_RS18215 () | 3460084..3460380 | + | 297 | WP_000967595.1 | YciI family protein | - |
| C1P70_RS18220 () | 3460680..3461933 | + | 1254 | WP_005031395.1 | voltage-gated potassium channel protein | - |
| C1P70_RS18225 () | 3461988..3462161 | - | 174 | WP_001309467.1 | YciY family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|