MGE detailed information
MGE type: Prophage MGE length: 81354 bp
Accession: NZ_CP026828 Location: 2610983..2692336 Organism: Shigella dysenteriae strain ATCC 12037 Replicon: chromosome
Accession: NZ_CP026828 Location: 2610983..2692336 Organism: Shigella dysenteriae strain ATCC 12037 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P70_RS13325 () | 2606542..2606737 | - | 196 | Protein_2565 | DUF905 family protein | - |
| C1P70_RS13330 () | 2606808..2609654 | - | 2847 | WP_134807080.1 | Ag43/Cah family autotransporter adhesin | - |
| C1P70_RS13335 () | 2610026..2610898 | - | 873 | WP_001407301.1 | GTPase family protein | - |
| C1P70_RS13340 () | 2610983..2611900 | - | 918 | WP_045146287.1 | hypothetical protein | - |
| C1P70_RS13360 () | 2613087..2613689 | - | 603 | WP_000813456.1 | hypothetical protein | - |
| C1P70_RS13365 () | 2613784..2613990 | - | 207 | WP_000235221.1 | AlpA family transcriptional regulator | - |
| C1P70_RS13385 () | 2614731..2614874 | + | 144 | Protein_2571 | hemolysin activation protein | - |
| C1P70_RS26680 () | 2615220..2615423 | - | 204 | WP_134807081.1 | hypothetical protein | - |
| C1P70_RS13400 () | 2616885..2617454 | + | 570 | WP_000221554.1 | inovirus Gp2 family protein | - |
| C1P70_RS13405 () | 2617620..2618012 | + | 393 | WP_000271005.1 | putative zinc ribbon protein | - |
| C1P70_RS13410 () | 2618022..2618990 | - | 969 | Protein_2576 | IS110 family transposase | - |
| C1P70_RS13415 () | 2619176..2619580 | + | 405 | WP_001221631.1 | zinc-ribbon domain-containing protein | - |
| C1P70_RS13420 () | 2619871..2620533 | + | 663 | Protein_2578 | ISL3 family transposase | - |
| C1P70_RS13425 () | 2620597..2620857 | + | 261 | Protein_2579 | IS3 family transposase ISSfl10 | Transposase |
| C1P70_RS13430 () | 2620867..2622041 | - | 1175 | Protein_2580 | IS30 family transposase IS30D | Transposase |
| C1P70_RS13440 () | 2623352..2623597 | - | 246 | Protein_2582 | IS3 family transposase ISEhe3 | Transposase |
| C1P70_RS26685 () | 2624158..2624346 | + | 189 | Protein_2583 | IS4 family transposase | - |
| C1P70_RS26690 () | 2624325..2624498 | + | 174 | Protein_2584 | cobalamin biosynthesis protein | - |
| C1P70_RS13455 () | 2624650..2625195 | + | 546 | WP_000973155.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| C1P70_RS13460 () | 2625192..2625935 | + | 744 | WP_001297350.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| C1P70_RS13465 () | 2625947..2627026 | + | 1080 | WP_134807083.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| C1P70_RS13470 () | 2627088..2628023 | + | 936 | WP_134807084.1 | L,D-transpeptidase | - |
| C1P70_RS13480 () | 2628482..2629399 | + | 918 | WP_134807085.1 | nitrogen assimilation transcriptional regulator NAC | - |
| C1P70_RS13485 () | 2629501..2630451 | + | 951 | WP_001010986.1 | HTH-type transcriptional regulator Cbl | - |
| C1P70_RS13495 () | 2630569..2631366 | + | 798 | Protein_2591 | MATE family efflux transporter | - |
| C1P70_RS13515 () | 2633035..2633763 | + | 729 | Protein_2594 | toxic metabolite efflux MATE transporter YeeO | - |
| C1P70_RS13525 () | 2634390..2634719 | - | 330 | WP_000460100.1 | transcriptional regulatory protein YeeN | VF |
| C1P70_RS13535 () | 2635475..2635648 | - | 174 | Protein_2597 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| C1P70_RS13545 () | 2636912..2643180 | - | 6269 | Protein_2599 | Ig-like domain-containing protein | - |
| C1P70_RS13555 () | 2643670..2644467 | - | 798 | WP_001302302.1 | DgsA anti-repressor MtfA | - |
| C1P70_RS13565 () | 2644678..2645405 | - | 728 | Protein_2601 | hypothetical protein ; Integrase | Integrase |
| C1P70_RS13580 () | 2647868..2648938 | + | 1071 | WP_047204729.1 | phage replisome organizer | - |
| C1P70_RS13585 () | 2648979..2649401 | + | 423 | WP_001151146.1 | DUF977 family protein | - |
| C1P70_RS13590 () | 2649398..2649703 | + | 306 | WP_001266147.1 | DUF4406 domain-containing protein | - |
| C1P70_RS13595 () | 2649690..2650145 | + | 456 | WP_000335375.1 | ead/Ea22-like family protein | - |
| C1P70_RS13600 () | 2650195..2651732 | - | 1538 | Protein_2608 | IS66 family transposase ISEc22 | Transposase |
| C1P70_RS13605 () | 2651781..2652128 | - | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| C1P70_RS13610 () | 2652125..2652505 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| C1P70_RS13615 () | 2652617..2652865 | + | 249 | Protein_2611 | hypothetical protein | - |
| C1P70_RS13625 () | 2653622..2653810 | + | 189 | WP_134807086.1 | hypothetical protein | - |
| - | 2654391..2654449 | - | 59 | - | - | Antitoxin Detail |
| C1P70_RS13640 () | 2654461..2654616 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| C1P70_RS13650 () | 2654784..2655062 | + | 279 | WP_000929754.1 | hypothetical protein | - |
| C1P70_RS13655 () | 2655064..2655813 | + | 750 | Protein_2616 | hypothetical protein | - |
| C1P70_RS13670 () | 2657083..2657325 | - | 243 | Protein_2618 | Regulator of RpoS | VF |
| C1P70_RS13675 () | 2657458..2657871 | + | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| C1P70_RS13680 () | 2657980..2658980 | + | 1001 | Protein_2620 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| C1P70_RS13685 () | 2658981..2659616 | + | 636 | WP_001241113.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| C1P70_RS13690 () | 2659873..2660523 | + | 651 | WP_001007759.1 | metal-binding protein ZinT | - |
| C1P70_RS13695 () | 2660741..2661897 | + | 1157 | WP_094110543.1 | IS3 family transposase IS600 | Transposase |
| C1P70_RS13700 () | 2662133..2662228 | + | 96 | Protein_2624 | cytochrome B | - |
| C1P70_RS13710 () | 2663592..2663999 | + | 408 | Protein_2626 | cytochrome b | - |
| C1P70_RS13715 () | 2664901..2666069 | + | 1169 | WP_094096743.1 | IS3 family transposase ISLad1 | Transposase |
| C1P70_RS13725 () | 2666229..2666477 | - | 249 | WP_134807320.1 | tail fiber assembly protein | - |
| C1P70_RS13730 () | 2666603..2666959 | + | 357 | WP_000239757.1 | IS66 family transposase IS682 | Transposase |
| C1P70_RS13735 () | 2666956..2667306 | + | 351 | WP_134801370.1 | IS66 family transposase ISEc47 | Transposase |
| C1P70_RS13740 () | 2667337..2668929 | + | 1593 | WP_001072394.1 | IS66 family transposase ISEc43 | Transposase |
| C1P70_RS13745 () | 2669069..2669737 | + | 669 | WP_134807087.1 | class I SAM-dependent methyltransferase | - |
| C1P70_RS13750 () | 2670053..2671696 | + | 1644 | WP_134807088.1 | hypothetical protein | VF |
| C1P70_RS26695 () | 2671766..2671870 | - | 105 | Protein_2634 | tail fiber assembly protein | - |
| C1P70_RS13760 () | 2671876..2672499 | - | 624 | WP_000551126.1 | DUF4376 domain-containing protein | - |
| C1P70_RS13765 () | 2672450..2673718 | - | 1269 | Protein_2636 | prophage tail fiber N-terminal domain-containing protein | - |
| C1P70_RS13770 () | 2673742..2674287 | - | 546 | WP_134807089.1 | tail fiber assembly protein | - |
| C1P70_RS13775 () | 2674361..2675058 | + | 698 | WP_252988889.1 | IS1 family transposase IS1R | Transposase |
| C1P70_RS26270 () | 2675075..2675377 | - | 303 | Protein_2639 | phage tail protein | - |
| C1P70_RS13785 () | 2676051..2676641 | - | 591 | WP_000377820.1 | DUF2313 domain-containing protein | - |
| C1P70_RS26000 () | 2676641..2676799 | - | 159 | WP_000281422.1 | hypothetical protein | - |
| C1P70_RS13790 () | 2676881..2678037 | + | 1157 | WP_094110543.1 | IS3 family transposase IS600 | Transposase |
| C1P70_RS13795 () | 2678079..2678513 | + | 435 | Protein_2643 | hypothetical protein | VF |
| C1P70_RS13800 () | 2678513..2679871 | + | 1359 | WP_000826751.1 | two-component system sensor histidine kinase HprS | - |
| C1P70_RS13805 () | 2679979..2680830 | - | 852 | WP_134807091.1 | protein deglycase HchA | - |
| C1P70_RS13820 () | 2682199..2682675 | - | 477 | Protein_2647 | porin | - |
| C1P70_RS13825 () | 2682790..2684018 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| C1P70_RS13830 () | 2684036..2684608 | - | 573 | Protein_2649 | porin | - |
| C1P70_RS13835 () | 2685259..2685540 | + | 282 | WP_001297704.1 | cell division protein DrpB | - |
| C1P70_RS13840 () | 2685580..2686275 | + | 696 | WP_000365568.1 | phosphohydrolase | - |
| C1P70_RS13845 () | 2686342..2687760 | + | 1419 | WP_001157236.1 | DNA-cytosine methyltransferase | - |
| C1P70_RS13850 () | 2687741..2688211 | + | 471 | WP_000786008.1 | VSPR family DNA mismatch endonuclease | - |
| C1P70_RS13855 () | 2688200..2689120 | - | 921 | WP_001212273.1 | drug/metabolite exporter YedA | - |
| C1P70_RS13860 () | 2689293..2690210 | + | 918 | WP_000922682.1 | DUF808 domain-containing protein | - |
| C1P70_RS13865 () | 2690289..2690471 | + | 183 | WP_000009307.1 | DUF2158 domain-containing protein | - |
| C1P70_RS13870 () | 2690642..2692336 | + | 1695 | WP_077897108.1 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
| C1P70_RS13875 () | 2692333..2693148 | - | 816 | WP_000491513.1 | mannosyl-3-phosphoglycerate phosphatase-related protein | - |
| C1P70_RS13880 () | 2693446..2693673 | - | 228 | WP_000844800.1 | peroxide/acid resistance protein YodD | - |
| C1P70_RS13885 () | 2693836..2694024 | + | 189 | WP_000867217.1 | protein DsrB | - |
| C1P70_RS13890 () | 2694135..2694832 | + | 698 | WP_094106546.1 | IS1 family transposase | - |
| C1P70_RS13895 () | 2694848..2695467 | - | 620 | Protein_2662 | transcriptional regulator RcsA | - |
| C1P70_RS13900 () | 2695751..2696532 | - | 782 | Protein_2663 | flagellar type III secretion system protein FliR | - |
| C1P70_RS13905 () | 2696541..2696810 | - | 270 | WP_000187358.1 | flagellar biosynthesis protein FliQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|