MGE detailed information
MGE type: IScluster/Tn MGE length: 19723 bp
Accession: NZ_CP026826 Location: 40205..59927 Organism: Shigella dysenteriae strain ATCC 12021 Replicon: plasmid unnamed
Accession: NZ_CP026826 Location: 40205..59927 Organism: Shigella dysenteriae strain ATCC 12021 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B75_RS00265 | 36262..39570 | + | 3309 | WP_038341661.1 | outer membrane autotransporter IcsA | - |
| C5B75_RS00270 | 39714..40032 | + | 319 | Protein_47 | fimbria/pilus outer membrane usher protein | - |
| C5B75_RS00275 | 40205..41414 | + | 1210 | Protein_48 | IS3 family transposase IS629 | Transposase |
| C5B75_RS00280 | 41755..43407 | + | 1653 | WP_000612524.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| C5B75_RS00285 | 43418..43588 | - | 171 | Protein_50 | transposase | - |
| C5B75_RS25590 | 43721..43840 | - | 120 | Protein_51 | transposase domain-containing protein | - |
| C5B75_RS00295 | 43914..44216 | - | 303 | WP_225620366.1 | group II intron maturase-specific domain-containing protein | - |
| C5B75_RS00300 | 44525..45192 | - | 668 | Protein_53 | reverse transcriptase domain-containing protein | - |
| C5B75_RS00305 | 45212..46402 | - | 1191 | WP_128874974.1 | IS4 family transposase ISEc60 | Transposase |
| C5B75_RS00310 | 46485..47075 | - | 591 | Protein_55 | reverse transcriptase domain-containing protein | - |
| C5B75_RS00315 | 47202..47417 | - | 216 | Protein_56 | IS3 family transposase ISSfl10 | Transposase |
| C5B75_RS00325 | 47544..49115 | - | 1572 | WP_128874939.1 | IS66 family transposase ISCro1 | Transposase |
| C5B75_RS00330 | 49135..49482 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| C5B75_RS00335 | 49482..50159 | - | 678 | WP_128874940.1 | IS66 family transposase ISCro1 | Transposase |
| C5B75_RS00340 | 50213..51288 | + | 1076 | Protein_60 | IS3 family transposase IS2 | Transposase |
| C5B75_RS25595 | 51383..51553 | - | 171 | WP_252988458.1 | hypothetical protein | - |
| C5B75_RS00345 | 51500..52149 | + | 650 | WP_152065544.1 | IS1 family transposase IS1X2 | Transposase |
| C5B75_RS00355 | 52282..52593 | + | 312 | Protein_63 | IS66 family transposase ISCro1 | Transposase |
| C5B75_RS00360 | 52607..53704 | - | 1098 | Protein_64 | IS4 family transposase IS4 | Transposase |
| C5B75_RS25600 | 53705..53809 | + | 105 | Protein_65 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5B75_RS00370 | 53829..55400 | + | 1572 | WP_128874939.1 | IS66 family transposase ISCro1 | Transposase |
| C5B75_RS00375 | 55430..55591 | - | 162 | Protein_67 | IS3 family transposase IS2 | Transposase |
| C5B75_RS00380 | 55679..55948 | - | 270 | Protein_68 | IS3 family transposase ISEc48 | Transposase |
| C5B75_RS25290 | 56063..56701 | - | 639 | WP_000607008.1 | hypothetical protein | VF |
| C5B75_RS00390 | 56860..57330 | - | 471 | Protein_70 | IS1 family transposase IS1N | Transposase |
| C5B75_RS00400 | 57666..57851 | + | 186 | Protein_71 | IS21 family transposase IS100 | Transposase |
| C5B75_RS00405 | 57951..58160 | - | 210 | Protein_72 | peptidoglycan-binding protein | - |
| C5B75_RS00410 | 58210..58461 | - | 252 | WP_000433928.1 | transporter | - |
| C5B75_RS00420 | 58913..59197 | + | 285 | WP_038341659.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C5B75_RS00425 | 59197..59430 | + | 234 | WP_119170698.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C5B75_RS25295 | 60020..60226 | + | 207 | WP_168177808.1 | hypothetical protein | - |
| C5B75_RS00435 | 60177..60476 | - | 300 | Protein_78 | hypothetical protein | - |
| C5B75_RS00445 | 60959..61801 | + | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| C5B75_RS00450 | 61804..62892 | + | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| C5B75_RS00455 | 62897..63847 | + | 951 | WP_012449328.1 | virulence factor VirK | - |
| C5B75_RS00460 | 63912..64856 | + | 945 | WP_005027201.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|