MGE detailed information
MGE type: IScluster/Tn MGE length: 51280 bp
Accession: NZ_CP026826 Location: 144756..196035 Organism: Shigella dysenteriae strain ATCC 12021 Replicon: plasmid unnamed
Accession: NZ_CP026826 Location: 144756..196035 Organism: Shigella dysenteriae strain ATCC 12021 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5B75_RS01010 | 140826..141806 | + | 981 | WP_000431558.1 | ParB family protein | - |
| C5B75_RS01015 | 142062..142547 | + | 486 | WP_252988460.1 | IS110 family transposase | - |
| C5B75_RS01020 | 142574..142753 | - | 180 | Protein_182 | transposase domain-containing protein | - |
| C5B75_RS01025 | 142836..143963 | - | 1128 | WP_252988461.1 | group II intron reverse transcriptase/maturase | - |
| C5B75_RS25655 | 143885..144223 | + | 339 | WP_227804374.1 | hypothetical protein | - |
| C5B75_RS01035 | 144540..144719 | - | 180 | Protein_185 | IS66 family transposase | - |
| C5B75_RS01040 | 144756..145965 | - | 1210 | Protein_186 | IS3 family transposase IS629 | Transposase |
| C5B75_RS01045 | 146019..146318 | - | 300 | Protein_187 | IS3 family transposase IS150 | Transposase |
| C5B75_RS25315 | 146434..146622 | + | 189 | WP_000957844.1 | hypothetical protein | - |
| C5B75_RS01055 | 146632..147756 | + | 1125 | Protein_189 | IS91 family transposase ISSbo1 | Transposase |
| C5B75_RS01065 | 148995..149409 | - | 415 | Protein_191 | transposase | - |
| C5B75_RS01070 | 149408..149779 | + | 372 | Protein_192 | IS21 family transposase IS100 | Transposase |
| C5B75_RS01075 | 149772..150560 | - | 789 | WP_128874979.1 | AraC family invasion system transcriptional regulator VirF | - |
| C5B75_RS01080 | 151059..152069 | + | 1011 | Protein_194 | IS110 family transposase ISSso6 | Transposase |
| C5B75_RS25135 | 153321..153596 | - | 276 | WP_158499413.1 | hypothetical protein | - |
| C5B75_RS01090 | 153495..154192 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C5B75_RS01095 | 154513..154911 | + | 399 | Protein_198 | integrase core domain-containing protein | - |
| C5B75_RS01100 | 155093..155359 | + | 267 | WP_128874961.1 | hypothetical protein | VF |
| C5B75_RS01105 | 155729..156925 | - | 1197 | WP_128874962.1 | IS110 family transposase ISEc20 | Transposase |
| C5B75_RS01115 | 157390..157701 | + | 312 | WP_119170759.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C5B75_RS01120 | 157701..157988 | + | 288 | WP_000865087.1 | helix-turn-helix transcriptional regulator | - |
| C5B75_RS01130 | 158526..159713 | - | 1188 | WP_128874976.1 | IS91 family transposase ISEc37 | Transposase |
| C5B75_RS01135 | 159713..160078 | - | 366 | WP_000124126.1 | hypothetical protein | - |
| C5B75_RS01140 | 160160..160354 | + | 195 | Protein_205 | HNH endonuclease | - |
| C5B75_RS01145 | 160497..160718 | + | 222 | Protein_206 | IS66 family transposase ISCro1 | Transposase |
| C5B75_RS01150 | 160739..160801 | - | 63 | Protein_207 | IS66 family transposase ISCro1 | Transposase |
| C5B75_RS01155 | 161252..162664 | + | 1413 | WP_119170679.1 | hypothetical protein | VF |
| C5B75_RS01160 | 162768..162917 | - | 150 | Protein_209 | IS1 family transposase | - |
| C5B75_RS01165 | 162993..164690 | + | 1698 | WP_119170680.1 | hypothetical protein | VF |
| C5B75_RS01170 | 164807..164926 | + | 120 | Protein_211 | IS66 family transposase ISCro1 | Transposase |
| C5B75_RS01180 | 165093..165365 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| C5B75_RS01185 | 165346..166554 | + | 1209 | WP_128874952.1 | IS91 family transposase ISSbo1 | Transposase |
| C5B75_RS01195 | 166731..167575 | + | 845 | Protein_214 | IS5 family transposase ISSfl7 | Transposase |
| C5B75_RS01200 | 167690..168721 | + | 1032 | WP_128874942.1 | IS630 family transposase IS630 | Transposase |
| C5B75_RS25320 | 168741..168992 | - | 252 | WP_001119655.1 | hypothetical protein | - |
| C5B75_RS01205 | 168915..169605 | + | 691 | Protein_217 | IS1 family transposase | - |
| C5B75_RS01210 | 169622..169801 | - | 180 | Protein_218 | transposase | - |
| C5B75_RS01215 | 170130..171827 | + | 1698 | WP_128874963.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C5B75_RS01220 | 172255..173979 | + | 1725 | WP_046881679.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| C5B75_RS01225 | 174031..175240 | + | 1210 | Protein_221 | IS3 family transposase IS629 | Transposase |
| C5B75_RS01230 | 175283..175806 | - | 524 | Protein_222 | IS3 family transposase ISSfl11 | Transposase |
| C5B75_RS25660 | 176325..176408 | - | 84 | Protein_223 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5B75_RS25665 | 176406..176536 | + | 131 | Protein_224 | IS1 family transposase | - |
| C5B75_RS01240 | 176645..176913 | + | 269 | Protein_225 | hypothetical protein | VF |
| C5B75_RS01245 | 177304..179031 | + | 1728 | WP_128874964.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| C5B75_RS01250 | 179061..179216 | - | 156 | Protein_227 | IS256 family transposase ISEc39 | Transposase |
| C5B75_RS01260 | 179323..179595 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| C5B75_RS01265 | 179576..180784 | + | 1209 | WP_128874952.1 | IS91 family transposase ISSbo1 | Transposase |
| C5B75_RS01270 | 180854..182041 | + | 1188 | WP_181876988.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| C5B75_RS01275 | 182111..182251 | + | 141 | Protein_231 | IS3 family transposase IS911 | Transposase |
| C5B75_RS01285 | 183509..183841 | + | 333 | Protein_233 | IS4 family transposase ISSfl1 | Transposase |
| C5B75_RS01290 | 184014..184499 | - | 486 | WP_000501969.1 | GNAT family N-acetyltransferase | Toxin Detail |
| C5B75_RS01295 | 184487..184771 | - | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| C5B75_RS25330 | 185680..185844 | + | 165 | WP_001346193.1 | hypothetical protein | - |
| C5B75_RS01320 | 186098..187619 | - | 1522 | Protein_237 | IS66 family transposase ISSfl3 | Transposase |
| C5B75_RS01325 | 187639..187821 | - | 183 | Protein_238 | IS66 family insertion sequence element accessory protein TnpB | - |
| C5B75_RS01335 | 188096..189115 | - | 1020 | WP_128874966.1 | IS110 family transposase ISEc11 | Transposase |
| C5B75_RS01340 | 189264..189428 | - | 165 | Protein_240 | IS66 family transposase ISSfl3 | Transposase |
| C5B75_RS01345 | 189425..190099 | - | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| C5B75_RS01350 | 190467..191921 | + | 1455 | WP_128874967.1 | hypothetical protein | VF |
| C5B75_RS01360 | 192259..193415 | + | 1157 | WP_128874968.1 | IS3 family transposase ISSd1 | Transposase |
| C5B75_RS01365 | 193456..193617 | + | 162 | Protein_244 | IS3 family transposase | - |
| C5B75_RS01370 | 193643..194839 | - | 1197 | WP_128874969.1 | IS110 family transposase ISEc20 | Transposase |
| C5B75_RS01375 | 195031..196035 | - | 1005 | WP_000255972.1 | IS21 family transposase IS100kyp | Transposase |
| C5B75_RS25670 | 196382..197191 | + | 810 | Protein_247 | IS110 family transposase | - |
| C5B75_RS01385 | 197388..198167 | + | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| C5B75_RS01390 | 199112..200041 | - | 930 | WP_128874970.1 | virulence regulon transcriptional activator VirB | - |
| C5B75_RS01395 | 200258..200494 | - | 237 | WP_000588811.1 | phosphopantetheine-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|