MGE detailed information
MGE type: Prophage MGE length: 57885 bp
Accession: NZ_CP026819 Location: 1086615..1144499 Organism: Shigella dysenteriae strain 96-265 Replicon: chromosome
Accession: NZ_CP026819 Location: 1086615..1144499 Organism: Shigella dysenteriae strain 96-265 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1P77_RS06355 () | 1081810..1082814 | + | 1005 | WP_000994889.1 | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF | - |
| C1P77_RS06360 () | 1082867..1083196 | - | 330 | WP_000366959.1 | HI1450 family dsDNA-mimic protein | - |
| C1P77_RS06365 () | 1083231..1084691 | - | 1461 | WP_000214508.1 | cardiolipin synthase | - |
| C1P77_RS06370 () | 1084834..1085007 | + | 174 | WP_001309467.1 | YciY family protein | - |
| C1P77_RS06375 () | 1085062..1086315 | - | 1254 | WP_005031395.1 | voltage-gated potassium channel protein | - |
| C1P77_RS06380 () | 1086615..1086911 | - | 297 | WP_000967595.1 | YciI family protein | - |
| C1P77_RS06385 () | 1087126..1087854 | + | 729 | WP_162281807.1 | Protein TonB | VF |
| C1P77_RS06390 () | 1087894..1088292 | - | 399 | WP_000108160.1 | acyl-CoA thioester hydrolase YciA | - |
| C1P77_RS06395 () | 1088397..1088936 | - | 540 | WP_000808667.1 | septation protein A | - |
| C1P77_RS06400 () | 1088966..1089709 | - | 744 | WP_000028541.1 | YciC family protein | - |
| C1P77_RS06405 () | 1089737..1089826 | - | 90 | Protein_1129 | YkgJ family cysteine cluster protein | - |
| C1P77_RS06410 () | 1090066..1090704 | + | 639 | WP_000737224.1 | outer membrane protein OmpW | - |
| C1P77_RS06415 () | 1090750..1091880 | - | 1131 | WP_000113688.1 | hypothetical protein ; Integrase | Integrase |
| C1P77_RS06420 () | 1091858..1092106 | - | 249 | WP_000113189.1 | excisionase | - |
| C1P77_RS06425 () | 1092171..1094645 | - | 2475 | WP_000048473.1 | exonuclease | - |
| C1P77_RS06430 () | 1094741..1094929 | - | 189 | WP_000199480.1 | DUF1482 family protein | - |
| C1P77_RS06435 () | 1094926..1095084 | - | 159 | WP_032335657.1 | cell division inhibition protein DicB | - |
| C1P77_RS06445 () | 1096423..1096797 | - | 375 | WP_005031383.1 | hypothetical protein | - |
| C1P77_RS06450 () | 1096809..1096961 | - | 153 | WP_000379596.1 | DUF1391 family protein | - |
| C1P77_RS06455 () | 1097151..1097558 | - | 408 | WP_001003379.1 | helix-turn-helix domain-containing protein | - |
| C1P77_RS06460 () | 1097636..1097863 | + | 228 | WP_000476986.1 | Cro/CI family transcriptional regulator | - |
| C1P77_RS06465 () | 1097847..1098398 | + | 552 | WP_000705383.1 | toxin YdaT family protein | - |
| C1P77_RS06470 () | 1098370..1099410 | + | 1041 | WP_000020542.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| C1P77_RS06475 () | 1099403..1099864 | + | 462 | WP_000139457.1 | replication protein P | - |
| C1P77_RS06480 () | 1099898..1100668 | + | 771 | WP_000450707.1 | DUF1627 domain-containing protein | - |
| C1P77_RS06485 () | 1100684..1101076 | + | 393 | WP_001141099.1 | DUF977 family protein | - |
| C1P77_RS06490 () | 1101073..1101369 | + | 297 | WP_001266130.1 | DUF4406 domain-containing protein | - |
| C1P77_RS06495 () | 1101366..1101827 | + | 462 | WP_001209470.1 | sigma-E factor regulatory protein RseB domain-containing protein | - |
| C1P77_RS06500 () | 1101805..1102161 | + | 357 | WP_000403782.1 | hypothetical protein | - |
| C1P77_RS06505 () | 1102257..1102439 | + | 183 | WP_001224665.1 | hypothetical protein | - |
| C1P77_RS27030 () | 1102432..1102608 | + | 177 | WP_000753053.1 | hypothetical protein | - |
| C1P77_RS06510 () | 1102605..1102964 | + | 360 | WP_001289986.1 | hypothetical protein | - |
| C1P77_RS06515 () | 1102965..1103180 | + | 216 | WP_000510389.1 | hypothetical protein | - |
| C1P77_RS06520 () | 1103182..1103400 | + | 219 | WP_001142588.1 | DUF4014 family protein | - |
| C1P77_RS06525 () | 1103402..1103665 | + | 264 | WP_000224216.1 | hypothetical protein | - |
| C1P77_RS06530 () | 1103676..1103843 | + | 168 | WP_000207997.1 | hypothetical protein | - |
| C1P77_RS06535 () | 1104043..1105271 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| C1P77_RS06540 () | 1105256..1105519 | + | 264 | WP_242412557.1 | hypothetical protein | - |
| - | 1105741..1105799 | - | 59 | - | - | Antitoxin Detail |
| C1P77_RS06545 () | 1105811..1105966 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| C1P77_RS06550 () | 1106183..1106434 | + | 252 | WP_000980988.1 | protein Rem | - |
| C1P77_RS06555 () | 1106501..1106779 | + | 279 | WP_032335658.1 | hypothetical protein | - |
| C1P77_RS06560 () | 1106781..1107827 | + | 1047 | WP_001265099.1 | DUF968 domain-containing protein | - |
| C1P77_RS06565 () | 1107840..1108214 | + | 375 | WP_000904094.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C1P77_RS06570 () | 1108211..1109032 | + | 822 | WP_069661440.1 | antitermination protein | - |
| C1P77_RS06575 () | 1109259..1109499 | + | 241 | Protein_1164 | hypothetical protein | - |
| C1P77_RS06580 () | 1109607..1110665 | + | 1059 | WP_000935541.1 | site-specific DNA-methyltransferase | - |
| C1P77_RS06595 () | 1110955..1111065 | + | 111 | WP_046891796.1 | DUF3927 family protein | - |
| C1P77_RS27035 () | 1111618..1111743 | - | 126 | Protein_1167 | hypothetical protein | - |
| C1P77_RS06605 () | 1111814..1112149 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| C1P77_RS06610 () | 1112409..1114265 | + | 1857 | WP_000874316.1 | SASA family carbohydrate esterase | - |
| C1P77_RS06615 () | 1114412..1115640 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| C1P77_RS06620 () | 1115752..1115967 | + | 216 | WP_000284510.1 | class II holin family protein | - |
| C1P77_RS06625 () | 1115972..1116316 | + | 345 | WP_000193262.1 | YdfR family protein | - |
| C1P77_RS06630 () | 1116282..1116554 | - | 273 | WP_000369850.1 | hypothetical protein | - |
| C1P77_RS06635 () | 1116660..1117193 | + | 534 | WP_000992072.1 | lysozyme | - |
| C1P77_RS27040 () | 1117492..1117959 | + | 468 | WP_001082562.1 | lysis protein | - |
| C1P77_RS06650 () | 1118402..1118950 | + | 549 | WP_000867569.1 | terminase small subunit | - |
| C1P77_RS06655 () | 1118922..1120850 | + | 1929 | WP_024259736.1 | phage terminase large subunit family protein | - |
| C1P77_RS06660 () | 1120834..1121040 | + | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| C1P77_RS06665 () | 1121037..1122629 | + | 1593 | WP_005046188.1 | phage portal protein | - |
| C1P77_RS06670 () | 1122619..1124125 | + | 1507 | Protein_1180 | S49 family peptidase | - |
| C1P77_RS06675 () | 1124162..1124509 | + | 348 | WP_000256833.1 | head decoration protein | - |
| C1P77_RS06680 () | 1124567..1125595 | + | 1029 | WP_000522588.1 | major capsid protein | - |
| C1P77_RS06685 () | 1125647..1126030 | + | 384 | WP_000201502.1 | DNA-packaging protein FI | - |
| C1P77_RS06690 () | 1126023..1126376 | + | 354 | WP_001204568.1 | head-tail joining protein | - |
| C1P77_RS06695 () | 1126392..1126925 | + | 534 | WP_000974980.1 | phage tail protein | - |
| C1P77_RS06700 () | 1126922..1127317 | + | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| C1P77_RS06705 () | 1127319..1127930 | + | 612 | Protein_1187 | Ig domain-containing protein | - |
| C1P77_RS06710 () | 1127944..1128375 | + | 432 | WP_000479095.1 | phage minor tail protein G | - |
| C1P77_RS06715 () | 1128402..1128815 | + | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| C1P77_RS06720 () | 1128796..1131369 | + | 2574 | WP_046891712.1 | phage tail tape measure protein | - |
| C1P77_RS06725 () | 1131366..1131695 | + | 330 | WP_000847332.1 | phage tail protein | - |
| C1P77_RS06730 () | 1131695..1132393 | + | 699 | WP_001152648.1 | phage minor tail protein L | - |
| C1P77_RS06735 () | 1132398..1133141 | + | 744 | WP_000140710.1 | C40 family peptidase | - |
| C1P77_RS06740 () | 1133138..1133680 | + | 543 | WP_000847633.1 | tail assembly protein | - |
| C1P77_RS27045 () | 1133753..1134091 | + | 339 | WP_153933134.1 | hypothetical protein | - |
| C1P77_RS06750 () | 1134158..1137637 | + | 3480 | WP_000515473.1 | host specificity protein J | - |
| C1P77_RS06755 () | 1137705..1138304 | + | 600 | WP_001228225.1 | Outer membrane protein X | VF |
| C1P77_RS06760 () | 1138369..1141344 | + | 2976 | WP_032335670.1 | phage tail protein | - |
| C1P77_RS06765 () | 1141356..1141928 | + | 573 | WP_001294928.1 | tail fiber assembly protein | - |
| C1P77_RS06775 () | 1141983..1142651 | - | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| C1P77_RS06780 () | 1142708..1142976 | + | 269 | Protein_1201 | tail fiber assembly protein | - |
| C1P77_RS27050 () | 1143115..1143261 | + | 147 | WP_001460318.1 | hypothetical protein | - |
| C1P77_RS06785 () | 1143566..1143691 | + | 126 | Protein_1203 | OmpW family outer membrane protein | - |
| C1P77_RS06790 () | 1143802..1144499 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| C1P77_RS06795 () | 1144743..1145549 | - | 807 | WP_000443080.1 | tryptophan synthase subunit alpha | - |
| C1P77_RS06800 () | 1145549..1146742 | - | 1194 | WP_000209505.1 | tryptophan synthase subunit beta | - |
| C1P77_RS06805 () | 1146754..1148115 | - | 1362 | WP_000983895.1 | bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|